RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 ELANEP08246 267 aa10.05□□□□□ -0.8
PRPF40B-209ENST00000548825 Q6YL49 198 aa10.05□□□□□ -0.8
PRPF40B-209ENST00000548825 UNC79Q9P2D8 2635 aa10.04□□□□□ -0.8
PRPF40B-209ENST00000548825 TENM4Q6N022 2769 aa10.04□□□□□ -0.8
PRPF40B-209ENST00000548825 KLK9Q2XQG4 91 aa10.04□□□□□ -0.8
PRPF40B-209ENST00000548825 RBMY1BA6NDE4 496 aaKnown RBP10.04□□□□□ -0.8
PRPF40B-209ENST00000548825 RBMY1EA6NEQ0 496 aaKnown RBP10.04□□□□□ -0.8
PRPF40B-209ENST00000548825 RBMY1DP0C7P1 496 aaKnown RBP10.04□□□□□ -0.8
PRPF40B-209ENST00000548825 AZU1P20160 251 aa10.04□□□□□ -0.8
PRPF40B-209ENST00000548825 NSUN5P1Q3KNT7 163 aa10.04□□□□□ -0.8
PRPF40B-209ENST00000548825 STHQ8IWL8 128 aa10.04□□□□□ -0.8
PRPF40B-209ENST00000548825 TRAV13-1A0A0B4J241 112 aa10.04□□□□□ -0.8
PRPF40B-209ENST00000548825 H3BMM0 161 aa10.03□□□□□ -0.8
PRPF40B-209ENST00000548825 DEFB113Q30KQ7 82 aa10.03□□□□□ -0.8
PRPF40B-209ENST00000548825 GEMIN7Q9H840 131 aaKnown RBP10.03□□□□□ -0.8
PRPF40B-209ENST00000548825 C9orf85Q96MD7 179 aa10.03□□□□□ -0.8
PRPF40B-209ENST00000548825 A0A0J9YY99 117 aa10.02□□□□□ -0.8
PRPF40B-209ENST00000548825 A4D1N5 150 aa10.02□□□□□ -0.8
PRPF40B-209ENST00000548825 G3V4G9 280 aa10.02□□□□□ -0.8
PRPF40B-209ENST00000548825 PLA2G2AP14555 144 aa10.02□□□□□ -0.8
PRPF40B-209ENST00000548825 ZNF843Q8N446 348 aa10.02□□□□□ -0.8
PRPF40B-209ENST00000548825 C20orf203Q8NBC4 194 aa10.02□□□□□ -0.8
PRPF40B-209ENST00000548825 NDUFA7O95182 113 aa10.02□□□□□ -0.81
PRPF40B-209ENST00000548825 TRBV27A0A0K0K1C4 114 aa10.02□□□□□ -0.81
PRPF40B-209ENST00000548825 MED14OSP0DP75 135 aa10.02□□□□□ -0.81
PRPF40B-209ENST00000548825 YAE1D1Q9NRH1 226 aa10.02□□□□□ -0.81
PRPF40B-209ENST00000548825 PEMTQ9UBM1 199 aa10.02□□□□□ -0.81
PRPF40B-209ENST00000548825 LGALS9O00182 355 aa10.01□□□□□ -0.81
PRPF40B-209ENST00000548825 TSPAN13O95857 204 aa10.01□□□□□ -0.81
PRPF40B-209ENST00000548825 Q6ZSV7 163 aa10.01□□□□□ -0.81
PRPF40B-209ENST00000548825 MAP6D1Q9H9H5 199 aa10.01□□□□□ -0.81
PRPF40B-209ENST00000548825 IGLV4-3A0A075B6K6 122 aa10□□□□□ -0.81
PRPF40B-209ENST00000548825 TMEM141Q96I45 108 aa10□□□□□ -0.81
PRPF40B-209ENST00000548825 GAGE12JA6NER3 117 aa10□□□□□ -0.81
PRPF40B-209ENST00000548825 GAGE4Q13068 117 aa10□□□□□ -0.81
PRPF40B-209ENST00000548825 GAGE5Q13069 117 aa10□□□□□ -0.81
PRPF40B-209ENST00000548825 MUSTN1Q8IVN3 82 aa10□□□□□ -0.81
PRPF40B-209ENST00000548825 TIMM21Q9BVV7 248 aa10□□□□□ -0.81
PRPF40B-209ENST00000548825 J3QR89 54 aa10□□□□□ -0.81
PRPF40B-209ENST00000548825 ZNF415Q09FC8 603 aa9.99□□□□□ -0.81
PRPF40B-209ENST00000548825 PAPPA-AS1Q5QFB9 102 aa9.99□□□□□ -0.81
PRPF40B-209ENST00000548825 SAMD13Q5VXD3 122 aa9.99□□□□□ -0.81
PRPF40B-209ENST00000548825 ZNF22P17026 224 aaPredicted RBP9.99□□□□□ -0.81
PRPF40B-209ENST00000548825 Q6ZUT4 128 aa9.99□□□□□ -0.81
PRPF40B-209ENST00000548825 CITED2Q99967 270 aaPredicted RBP9.99□□□□□ -0.81
PRPF40B-209ENST00000548825 J3QLI3 93 aa9.99□□□□□ -0.81
PRPF40B-209ENST00000548825 TIMM17AQ99595 171 aa9.99□□□□□ -0.81
PRPF40B-209ENST00000548825 LINC00467Q9BRT7 94 aa9.99□□□□□ -0.81
PRPF40B-209ENST00000548825 M0R2P5 195 aa9.98□□□□□ -0.81
PRPF40B-209ENST00000548825 TAL2Q16559 108 aa9.98□□□□□ -0.81
PRPF40B-209ENST00000548825 TEP1Q99973 2627 aaKnown RBP9.98□□□□□ -0.81
PRPF40B-209ENST00000548825 VWFP04275 2813 aa9.98□□□□□ -0.81
PRPF40B-209ENST00000548825 TRGV2A0A075B6R0 118 aa9.98□□□□□ -0.81
PRPF40B-209ENST00000548825 RHODO00212 210 aa9.98□□□□□ -0.81
PRPF40B-209ENST00000548825 CFC1BP0CG36 223 aa9.98□□□□□ -0.81
PRPF40B-209ENST00000548825 CFC1P0CG37 223 aa9.98□□□□□ -0.81
PRPF40B-209ENST00000548825 NOP10Q9NPE3 64 aaKnown RBP9.98□□□□□ -0.81
PRPF40B-209ENST00000548825 C9JAW5 83 aa9.97□□□□□ -0.81
PRPF40B-209ENST00000548825 NDUFA11Q86Y39 141 aa9.97□□□□□ -0.81
PRPF40B-209ENST00000548825 TRBV7-9A0A0J9YWB2 115 aa9.97□□□□□ -0.81
PRPF40B-209ENST00000548825 GAGE7O76087 117 aa9.97□□□□□ -0.81
PRPF40B-209ENST00000548825 NXPH4O95158 308 aa9.97□□□□□ -0.81
PRPF40B-209ENST00000548825 INSP01308 110 aa9.97□□□□□ -0.81
PRPF40B-209ENST00000548825 GAGE12FP0CL80 117 aa9.97□□□□□ -0.81
PRPF40B-209ENST00000548825 GAGE12GP0CL81 117 aa9.97□□□□□ -0.81
PRPF40B-209ENST00000548825 GAGE12IP0CL82 117 aa9.97□□□□□ -0.81
PRPF40B-209ENST00000548825 IGHV3-30-3P0DP02 117 aa9.97□□□□□ -0.81
PRPF40B-209ENST00000548825 Q6ZTI0 123 aa9.97□□□□□ -0.81
PRPF40B-209ENST00000548825 CIDEAO60543 219 aa9.97□□□□□ -0.81
PRPF40B-209ENST00000548825 SPANXB1Q9NS25 103 aaPredicted RBP9.97□□□□□ -0.81
PRPF40B-209ENST00000548825 TOMM7Q9P0U1 55 aa9.97□□□□□ -0.81
PRPF40B-209ENST00000548825 TCL1BO95988 128 aa9.96□□□□□ -0.81
PRPF40B-209ENST00000548825 NDUFA12Q9UI09 145 aa9.96□□□□□ -0.81
PRPF40B-209ENST00000548825 A0A096LNT2 108 aa9.96□□□□□ -0.82
PRPF40B-209ENST00000548825 DNAJC9-AS1A6NH13 148 aa9.96□□□□□ -0.82
PRPF40B-209ENST00000548825 F8W1H4 67 aa9.96□□□□□ -0.82
PRPF40B-209ENST00000548825 CCL24O00175 119 aa9.96□□□□□ -0.82
PRPF40B-209ENST00000548825 DEFB114Q30KQ6 69 aa9.96□□□□□ -0.82
PRPF40B-209ENST00000548825 AKAP9Q99996 3911 aa9.96□□□□□ -0.82
PRPF40B-209ENST00000548825 CFAP126Q5VTH2 177 aa9.95□□□□□ -0.82
PRPF40B-209ENST00000548825 CLUHP3Q96NS8 147 aa9.95□□□□□ -0.82
PRPF40B-209ENST00000548825 SMR3AQ99954 134 aa9.95□□□□□ -0.82
PRPF40B-209ENST00000548825 PRO1854Q9UHT4 67 aa9.95□□□□□ -0.82
PRPF40B-209ENST00000548825 ERG28Q9UKR5 140 aa9.95□□□□□ -0.82
PRPF40B-209ENST00000548825 CR1P17927 2039 aa9.95□□□□□ -0.82
PRPF40B-209ENST00000548825 GAGE12HA6NDE8 117 aa9.95□□□□□ -0.82
PRPF40B-209ENST00000548825 C11orf68Q9H3H3 251 aaKnown RBP9.95□□□□□ -0.82
PRPF40B-209ENST00000548825 A0A096LPF7 62 aa9.94□□□□□ -0.82
PRPF40B-209ENST00000548825 IGHV3-30P01768 117 aa9.94□□□□□ -0.82
PRPF40B-209ENST00000548825 IGHV3-30-5P0DP03 117 aa9.94□□□□□ -0.82
PRPF40B-209ENST00000548825 C10orf126Q8N4M7 172 aa9.94□□□□□ -0.82
PRPF40B-209ENST00000548825 A8MWV9 139 aa9.94□□□□□ -0.82
PRPF40B-209ENST00000548825 TMEM223A0PJW6 202 aa9.94□□□□□ -0.82
PRPF40B-209ENST00000548825 DEFB130BP0DP73 79 aa9.94□□□□□ -0.82
PRPF40B-209ENST00000548825 DEFB130AP0DP74 79 aa9.94□□□□□ -0.82
PRPF40B-209ENST00000548825 RHOHQ15669 191 aa9.94□□□□□ -0.82
PRPF40B-209ENST00000548825 ODF3L2Q3SX64 289 aa9.94□□□□□ -0.82
PRPF40B-209ENST00000548825 CDKN2A-AS1Q9UH64 79 aa9.94□□□□□ -0.82
PRPF40B-209ENST00000548825 SLC25A29Q8N8R3 303 aa9.93□□□□□ -0.82
PRPF40B-209ENST00000548825 MEIG1Q5JSS6 88 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms