RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 SAA1P0DJI8 122 aaPredicted RBP2.12□□□□□ -2.07
SCAF11-210ENST00000547654 HIST1H1BP16401 226 aaKnown RBP2.12□□□□□ -2.07
SCAF11-210ENST00000547654 BRS3P32247 399 aa2.12□□□□□ -2.07
SCAF11-210ENST00000547654 AKR1D1P51857 326 aa2.12□□□□□ -2.07
SCAF11-210ENST00000547654 DSCR4P56555 118 aaPredicted RBP2.12□□□□□ -2.07
SCAF11-210ENST00000547654 DNAJB13P59910 316 aa2.12□□□□□ -2.07
SCAF11-210ENST00000547654 SELENOWP63302 87 aa2.12□□□□□ -2.07
SCAF11-210ENST00000547654 QRFPP83859 136 aa2.12□□□□□ -2.07
SCAF11-210ENST00000547654 TPRXLQ17RH7 258 aa2.12□□□□□ -2.07
SCAF11-210ENST00000547654 GLYATL3Q5SZD4 288 aa2.12□□□□□ -2.07
SCAF11-210ENST00000547654 C2orf82Q6UX34 121 aa2.12□□□□□ -2.07
SCAF11-210ENST00000547654 CLECL1Q8IZS7 167 aa2.12□□□□□ -2.07
SCAF11-210ENST00000547654 DEFB119Q8N690 84 aa2.12□□□□□ -2.07
SCAF11-210ENST00000547654 Q8N814 137 aa2.12□□□□□ -2.07
SCAF11-210ENST00000547654 MUCL1Q96DR8 90 aa2.12□□□□□ -2.07
SCAF11-210ENST00000547654 LYSTQ99698 3801 aa2.12□□□□□ -2.07
SCAF11-210ENST00000547654 MYO7BQ6PIF6 2116 aa2.12□□□□□ -2.07
SCAF11-210ENST00000547654 TRAV27A0A087WT01 109 aa2.11□□□□□ -2.07
SCAF11-210ENST00000547654 IGKV2D-26A0A0A0MRZ7 120 aa2.11□□□□□ -2.07
SCAF11-210ENST00000547654 ZNF727A8MUV8 499 aa2.11□□□□□ -2.07
SCAF11-210ENST00000547654 E7EUB6 86 aa2.11□□□□□ -2.07
SCAF11-210ENST00000547654 F8W036 122 aa2.11□□□□□ -2.07
SCAF11-210ENST00000547654 GPX1P07203 203 aa2.11□□□□□ -2.07
SCAF11-210ENST00000547654 COPZ1P61923 177 aa2.11□□□□□ -2.07
SCAF11-210ENST00000547654 RPS25P62851 125 aaKnown RBP2.11□□□□□ -2.07
SCAF11-210ENST00000547654 BLCAPP62952 87 aa2.11□□□□□ -2.07
SCAF11-210ENST00000547654 DEFB113Q30KQ7 82 aa2.11□□□□□ -2.07
SCAF11-210ENST00000547654 GLIPR1L1Q6UWM5 242 aa2.11□□□□□ -2.07
SCAF11-210ENST00000547654 OR5AK2Q8NH90 309 aa2.11□□□□□ -2.07
SCAF11-210ENST00000547654 ZNF431Q8TF32 576 aaPredicted RBP2.11□□□□□ -2.07
SCAF11-210ENST00000547654 LPAR5Q9H1C0 372 aa2.11□□□□□ -2.07
SCAF11-210ENST00000547654 FKBP11Q9NYL4 201 aa2.11□□□□□ -2.07
SCAF11-210ENST00000547654 ERG28Q9UKR5 140 aa2.11□□□□□ -2.07
SCAF11-210ENST00000547654 TNFSF18Q9UNG2 199 aa2.11□□□□□ -2.07
SCAF11-210ENST00000547654 ARHGAP32A7KAX9 2087 aa2.11□□□□□ -2.07
SCAF11-210ENST00000547654 CSMD3Q7Z407 3707 aa2.11□□□□□ -2.07
SCAF11-210ENST00000547654 TRAV10A0A0B4J240 114 aa2.1□□□□□ -2.07
SCAF11-210ENST00000547654 C2orf70A6NJV1 201 aa2.1□□□□□ -2.07
SCAF11-210ENST00000547654 B4DSR2 109 aa2.1□□□□□ -2.07
SCAF11-210ENST00000547654 ERC2-IT1O76042 136 aa2.1□□□□□ -2.07
SCAF11-210ENST00000547654 IGLV1-51P01701 117 aa2.1□□□□□ -2.07
SCAF11-210ENST00000547654 TSPAN19P0C672 248 aa2.1□□□□□ -2.07
SCAF11-210ENST00000547654 LINC00694P0DN24 101 aa2.1□□□□□ -2.07
SCAF11-210ENST00000547654 SLC25A4P12235 298 aa2.1□□□□□ -2.07
SCAF11-210ENST00000547654 HLA-DRB4P13762 266 aa2.1□□□□□ -2.07
SCAF11-210ENST00000547654 ZNF93P35789 620 aaPredicted RBP2.1□□□□□ -2.07
SCAF11-210ENST00000547654 BRD3OSQ6XYD6 125 aa2.1□□□□□ -2.07
SCAF11-210ENST00000547654 TMEM91Q6ZNR0 172 aa2.1□□□□□ -2.07
SCAF11-210ENST00000547654 CCL4L1Q8NHW4 92 aa2.1□□□□□ -2.07
SCAF11-210ENST00000547654 C4orf3Q8WVX3 66 aa2.1□□□□□ -2.07
SCAF11-210ENST00000547654 CLEC2BQ92478 149 aa2.1□□□□□ -2.07
SCAF11-210ENST00000547654 ARL11Q969Q4 196 aa2.1□□□□□ -2.07
SCAF11-210ENST00000547654 HLA-DRB4X5D2U9 266 aa2.1□□□□□ -2.07
SCAF11-210ENST00000547654 EML6Q6ZMW3 1958 aa2.1□□□□□ -2.07
SCAF11-210ENST00000547654 PLIN4Q96Q06 1357 aa2.1□□□□□ -2.07
SCAF11-210ENST00000547654 DNAH9Q9NYC9 4486 aa2.09□□□□□ -2.07
SCAF11-210ENST00000547654 NCR2O95944 276 aa2.09□□□□□ -2.07
SCAF11-210ENST00000547654 ETV6P41212 452 aa2.09□□□□□ -2.07
SCAF11-210ENST00000547654 PCBD1P61457 104 aa2.09□□□□□ -2.07
SCAF11-210ENST00000547654 RRAS2P62070 204 aaPredicted RBP2.09□□□□□ -2.07
SCAF11-210ENST00000547654 NEDD8Q15843 81 aa2.09□□□□□ -2.07
SCAF11-210ENST00000547654 ARPINQ7Z6K5 226 aa2.09□□□□□ -2.07
SCAF11-210ENST00000547654 CST11Q9H112 138 aa2.09□□□□□ -2.07
SCAF11-210ENST00000547654 COMMD3Q9UBI1 195 aa2.09□□□□□ -2.07
SCAF11-210ENST00000547654 MDC1Q14676 2089 aaKnown RBP2.09□□□□□ -2.07
SCAF11-210ENST00000547654 CPAMD8Q8IZJ3 1885 aa2.09□□□□□ -2.08
SCAF11-210ENST00000547654 USF3Q68DE3 2245 aa2.09□□□□□ -2.08
SCAF11-210ENST00000547654 HECTD4Q9Y4D8 3996 aa2.08□□□□□ -2.08
SCAF11-210ENST00000547654 UNC13CQ8NB66 2214 aa2.08□□□□□ -2.08
SCAF11-210ENST00000547654 A0A1B0GV90 55 aa2.08□□□□□ -2.08
SCAF11-210ENST00000547654 FAM25AB3EWG3 89 aa2.08□□□□□ -2.08
SCAF11-210ENST00000547654 FAM25CB3EWG5 89 aa2.08□□□□□ -2.08
SCAF11-210ENST00000547654 FAM25GB3EWG6 89 aa2.08□□□□□ -2.08
SCAF11-210ENST00000547654 J3QRE1 110 aa2.08□□□□□ -2.08
SCAF11-210ENST00000547654 CKS2P33552 79 aa2.08□□□□□ -2.08
SCAF11-210ENST00000547654 PDE6HQ13956 83 aa2.08□□□□□ -2.08
SCAF11-210ENST00000547654 DIAPH2-AS1Q14236 149 aa2.08□□□□□ -2.08
SCAF11-210ENST00000547654 C10orf111Q8N326 155 aa2.08□□□□□ -2.08
SCAF11-210ENST00000547654 SPACA4Q8TDM5 124 aa2.08□□□□□ -2.08
SCAF11-210ENST00000547654 CGREF1Q99674 301 aa2.08□□□□□ -2.08
SCAF11-210ENST00000547654 NABP2Q9BQ15 211 aa2.08□□□□□ -2.08
SCAF11-210ENST00000547654 GGACTQ9BVM4 153 aa2.08□□□□□ -2.08
SCAF11-210ENST00000547654 A0A087WSZ3 146 aa2.07□□□□□ -2.08
SCAF11-210ENST00000547654 LOC107984156A0A0G2JMH3 177 aa2.07□□□□□ -2.08
SCAF11-210ENST00000547654 PNMA8CA0A1B0GUJ8 204 aa2.07□□□□□ -2.08
SCAF11-210ENST00000547654 FAM92AA1XBS5 289 aa2.07□□□□□ -2.08
SCAF11-210ENST00000547654 NPFFO15130 113 aa2.07□□□□□ -2.08
SCAF11-210ENST00000547654 RBP4P02753 201 aa2.07□□□□□ -2.08
SCAF11-210ENST00000547654 CD2P06729 351 aa2.07□□□□□ -2.08
SCAF11-210ENST00000547654 SNRPD3P62318 126 aaKnown RBP2.07□□□□□ -2.08
SCAF11-210ENST00000547654 FP248Q71RG6 208 aaPredicted RBP2.07□□□□□ -2.08
SCAF11-210ENST00000547654 TEN1Q86WV5 123 aa2.07□□□□□ -2.08
SCAF11-210ENST00000547654 ARL17AQ8IVW1 177 aa2.07□□□□□ -2.08
SCAF11-210ENST00000547654 OR10AC1Q8NH08 325 aa2.07□□□□□ -2.08
SCAF11-210ENST00000547654 OR4C6Q8NH72 309 aa2.07□□□□□ -2.08
SCAF11-210ENST00000547654 LINC00470Q9BZP3 86 aa2.07□□□□□ -2.08
SCAF11-210ENST00000547654 INTS1Q8N201 2190 aaKnown RBP2.07□□□□□ -2.08
SCAF11-210ENST00000547654 CR1P17927 2039 aa2.07□□□□□ -2.08
SCAF11-210ENST00000547654 NUP210LQ5VU65 1888 aa2.06□□□□□ -2.08
SCAF11-210ENST00000547654 C3orf85A0A1B0GTC6 90 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms