RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 OSTCQ9NRP0 149 aa11.11□□□□□ -0.63
HOXD8-204ENST00000544999 TRAV26-2A0A0B4J265 109 aa11.1□□□□□ -0.63
HOXD8-204ENST00000544999 A0A1B0GUV1 79 aa11.1□□□□□ -0.63
HOXD8-204ENST00000544999 TEX261Q6UWH6 196 aa11.1□□□□□ -0.63
HOXD8-204ENST00000544999 LINC00269Q8N2A0 174 aa11.1□□□□□ -0.63
HOXD8-204ENST00000544999 TSKUQ8WUA8 353 aa11.1□□□□□ -0.63
HOXD8-204ENST00000544999 GFRA4Q9GZZ7 299 aa11.1□□□□□ -0.63
HOXD8-204ENST00000544999 FAM30AQ9NZY2 134 aa11.1□□□□□ -0.63
HOXD8-204ENST00000544999 FAM231BA6NCW3 169 aa11.09□□□□□ -0.63
HOXD8-204ENST00000544999 AMTP48728 403 aa11.09□□□□□ -0.63
HOXD8-204ENST00000544999 HAMPP81172 84 aa11.09□□□□□ -0.63
HOXD8-204ENST00000544999 FAM74A3Q4VXF1 159 aa11.09□□□□□ -0.63
HOXD8-204ENST00000544999 CLPSL2Q6UWE3 100 aa11.09□□□□□ -0.63
HOXD8-204ENST00000544999 Q6ZSA8 131 aa11.09□□□□□ -0.63
HOXD8-204ENST00000544999 C20orf203Q8NBC4 194 aa11.09□□□□□ -0.63
HOXD8-204ENST00000544999 HIGD1CA8MV81 97 aa11.08□□□□□ -0.64
HOXD8-204ENST00000544999 UBE2L6O14933 153 aa11.08□□□□□ -0.64
HOXD8-204ENST00000544999 Q5VSD8 79 aa11.08□□□□□ -0.64
HOXD8-204ENST00000544999 RPL39LQ96EH5 51 aaKnown RBP11.08□□□□□ -0.64
HOXD8-204ENST00000544999 A0A1B0GUT8 65 aa11.07□□□□□ -0.64
HOXD8-204ENST00000544999 HLA-DQA1P01909 254 aa11.07□□□□□ -0.64
HOXD8-204ENST00000544999 SMR3BP02814 79 aaPredicted RBP11.07□□□□□ -0.64
HOXD8-204ENST00000544999 REG3AQ06141 175 aa11.07□□□□□ -0.64
HOXD8-204ENST00000544999 TMEM241Q24JQ0 296 aa11.07□□□□□ -0.64
HOXD8-204ENST00000544999 V9GYV3 84 aa11.07□□□□□ -0.64
HOXD8-204ENST00000544999 DNAH8Q96JB1 4490 aa11.06□□□□□ -0.64
HOXD8-204ENST00000544999 IGLV4-60A0A075B6I1 120 aa11.06□□□□□ -0.64
HOXD8-204ENST00000544999 NCR2O95944 276 aa11.06□□□□□ -0.64
HOXD8-204ENST00000544999 PEA15Q15121 130 aa11.06□□□□□ -0.64
HOXD8-204ENST00000544999 KRTAP26-1Q6PEX3 210 aa11.06□□□□□ -0.64
HOXD8-204ENST00000544999 DEFB104AQ8WTQ1 72 aa11.06□□□□□ -0.64
HOXD8-204ENST00000544999 ISOC2Q96AB3 205 aa11.06□□□□□ -0.64
HOXD8-204ENST00000544999 TRAV8-4A0A0B4J246 113 aa11.05□□□□□ -0.64
HOXD8-204ENST00000544999 C9JQL5 133 aa11.05□□□□□ -0.64
HOXD8-204ENST00000544999 USP17L23D6RBM5 183 aa11.05□□□□□ -0.64
HOXD8-204ENST00000544999 RPL23P62829 140 aaKnown RBP11.05□□□□□ -0.64
HOXD8-204ENST00000544999 TMEM191AQ9H0A3 160 aa11.05□□□□□ -0.64
HOXD8-204ENST00000544999 SMDT1Q9H4I9 107 aa11.05□□□□□ -0.64
HOXD8-204ENST00000544999 TRBV6-5A0A0K0K1A5 114 aa11.04□□□□□ -0.64
HOXD8-204ENST00000544999 SDHAF1A6NFY7 115 aa11.04□□□□□ -0.64
HOXD8-204ENST00000544999 FAM229AH3BQW9 127 aa11.04□□□□□ -0.64
HOXD8-204ENST00000544999 LINC01620Q4KN68 170 aa11.04□□□□□ -0.64
HOXD8-204ENST00000544999 NAT8Q9UHE5 227 aa11.04□□□□□ -0.64
HOXD8-204ENST00000544999 SRSF3P84103 164 aaKnown RBP11.03□□□□□ -0.64
HOXD8-204ENST00000544999 RNF185Q96GF1 192 aa11.03□□□□□ -0.64
HOXD8-204ENST00000544999 IGLV10-54A0A075B6I4 117 aa11.02□□□□□ -0.65
HOXD8-204ENST00000544999 H7C423 109 aa11.02□□□□□ -0.65
HOXD8-204ENST00000544999 APCSP02743 223 aa11.02□□□□□ -0.65
HOXD8-204ENST00000544999 INAFM2P0DMQ5 153 aa11.02□□□□□ -0.65
HOXD8-204ENST00000544999 RIGQ13278 110 aa11.02□□□□□ -0.65
HOXD8-204ENST00000544999 ADIRFQ15847 76 aa11.02□□□□□ -0.65
HOXD8-204ENST00000544999 NUP35Q8NFH5 326 aa11.02□□□□□ -0.65
HOXD8-204ENST00000544999 I3L3M4 83 aa11.01□□□□□ -0.65
HOXD8-204ENST00000544999 PRSS1P07477 247 aa11.01□□□□□ -0.65
HOXD8-204ENST00000544999 RAB4AP20338 218 aa11.01□□□□□ -0.65
HOXD8-204ENST00000544999 PMCHP20382 165 aa11.01□□□□□ -0.65
HOXD8-204ENST00000544999 MRAP2Q96G30 205 aa11.01□□□□□ -0.65
HOXD8-204ENST00000544999 ST20Q9HBF5 79 aa11.01□□□□□ -0.65
HOXD8-204ENST00000544999 NAT8BQ9UHF3 227 aa11.01□□□□□ -0.65
HOXD8-204ENST00000544999 GAS8-AS1O95177 125 aa11□□□□□ -0.65
HOXD8-204ENST00000544999 AMMECR1LQ6DCA0 310 aa11□□□□□ -0.65
HOXD8-204ENST00000544999 DGAT2L7PQ6IED9 249 aa11□□□□□ -0.65
HOXD8-204ENST00000544999 AMN1Q8IY45 258 aa11□□□□□ -0.65
HOXD8-204ENST00000544999 CLRN3Q8NCR9 226 aa11□□□□□ -0.65
HOXD8-204ENST00000544999 FAT1Q14517 4588 aa10.99□□□□□ -0.65
HOXD8-204ENST00000544999 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.99□□□□□ -0.65
HOXD8-204ENST00000544999 IGKV2-29A2NJV5 120 aaPredicted RBP10.99□□□□□ -0.65
HOXD8-204ENST00000544999 VPS13BQ7Z7G8 4022 aa10.98□□□□□ -0.65
HOXD8-204ENST00000544999 SMIM27A0A1W2PRY6 76 aa10.98□□□□□ -0.65
HOXD8-204ENST00000544999 POLR2KP53803 58 aaKnown RBP10.98□□□□□ -0.65
HOXD8-204ENST00000544999 RNASEKQ6P5S7 137 aaKnown RBP10.98□□□□□ -0.65
HOXD8-204ENST00000544999 SCXQ7RTU7 201 aa10.98□□□□□ -0.65
HOXD8-204ENST00000544999 FGF6P10767 208 aa10.97□□□□□ -0.65
HOXD8-204ENST00000544999 ESDP10768 282 aa10.97□□□□□ -0.65
HOXD8-204ENST00000544999 ZNF25P17030 456 aaPredicted RBP10.97□□□□□ -0.65
HOXD8-204ENST00000544999 RPS10P46783 165 aaKnown RBP10.97□□□□□ -0.65
HOXD8-204ENST00000544999 CHAC1Q9BUX1 264 aa10.97□□□□□ -0.65
HOXD8-204ENST00000544999 TRBV27A0A0K0K1C4 114 aa10.96□□□□□ -0.65
HOXD8-204ENST00000544999 PPP1R17O96001 155 aa10.96□□□□□ -0.65
HOXD8-204ENST00000544999 TSHBP01222 138 aa10.96□□□□□ -0.65
HOXD8-204ENST00000544999 C9orf163Q8N9P6 203 aa10.96□□□□□ -0.65
HOXD8-204ENST00000544999 TMEM242Q9NWH2 141 aa10.96□□□□□ -0.65
HOXD8-204ENST00000544999 IGKV3OR2-268A0A0C4DH90 116 aa10.94□□□□□ -0.66
HOXD8-204ENST00000544999 A0A1B0GW15 77 aa10.94□□□□□ -0.66
HOXD8-204ENST00000544999 hDV102S1A0JD36 115 aa10.94□□□□□ -0.66
HOXD8-204ENST00000544999 GAGE12HA6NDE8 117 aa10.94□□□□□ -0.66
HOXD8-204ENST00000544999 SMKR1H3BMG3 65 aa10.94□□□□□ -0.66
HOXD8-204ENST00000544999 PLA2G1BP04054 148 aaKnown RBP10.94□□□□□ -0.66
HOXD8-204ENST00000544999 FAM104BQ5XKR9 115 aa10.94□□□□□ -0.66
HOXD8-204ENST00000544999 CIRBP-AS1Q8TBR5 109 aa10.94□□□□□ -0.66
HOXD8-204ENST00000544999 TMEM101Q96IK0 257 aa10.94□□□□□ -0.66
HOXD8-204ENST00000544999 BTF3L4Q96K17 158 aa10.94□□□□□ -0.66
HOXD8-204ENST00000544999 CNBPP62633 177 aaKnown RBP10.93□□□□□ -0.66
HOXD8-204ENST00000544999 NRACQ8N912 160 aa10.93□□□□□ -0.66
HOXD8-204ENST00000544999 OR5A1Q8NGJ0 315 aa10.93□□□□□ -0.66
HOXD8-204ENST00000544999 VCYO14598 125 aa10.92□□□□□ -0.66
HOXD8-204ENST00000544999 PPP1R2P9O14990 202 aa10.92□□□□□ -0.66
HOXD8-204ENST00000544999 SUMO2P61956 95 aaKnown RBP10.92□□□□□ -0.66
HOXD8-204ENST00000544999 MRPL51Q4U2R6 128 aaKnown RBP10.92□□□□□ -0.66
HOXD8-204ENST00000544999 CFAP161Q6P656 301 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms