RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 KLK12Q9UKR0 248 aa12.77□□□□□ -0.37
DDX55-211ENST00000544429 DYNC1H1Q14204 4646 aaKnown RBP12.76□□□□□ -0.37
DDX55-211ENST00000544429 TRBV24-1A0A075B6N3 115 aa12.76□□□□□ -0.37
DDX55-211ENST00000544429 TMEM262E9PQX1 116 aa12.76□□□□□ -0.37
DDX55-211ENST00000544429 PPP1R17O96001 155 aa12.76□□□□□ -0.37
DDX55-211ENST00000544429 ELOBQ15370 118 aa12.76□□□□□ -0.37
DDX55-211ENST00000544429 Q9HAA7 133 aa12.76□□□□□ -0.37
DDX55-211ENST00000544429 TMEM242Q9NWH2 141 aa12.76□□□□□ -0.37
DDX55-211ENST00000544429 A0A1B0GUV1 79 aa12.75□□□□□ -0.37
DDX55-211ENST00000544429 I3L3M4 83 aa12.75□□□□□ -0.37
DDX55-211ENST00000544429 RBX1P62877 108 aa12.75□□□□□ -0.37
DDX55-211ENST00000544429 GAGE6Q13070 117 aa12.75□□□□□ -0.37
DDX55-211ENST00000544429 Q8N976 141 aa12.75□□□□□ -0.37
DDX55-211ENST00000544429 DEFB104AQ8WTQ1 72 aa12.75□□□□□ -0.37
DDX55-211ENST00000544429 BTF3L4Q96K17 158 aa12.75□□□□□ -0.37
DDX55-211ENST00000544429 PRR34Q9NV39 138 aa12.75□□□□□ -0.37
DDX55-211ENST00000544429 TSHBP01222 138 aa12.74□□□□□ -0.37
DDX55-211ENST00000544429 AMTP48728 403 aa12.74□□□□□ -0.37
DDX55-211ENST00000544429 ENHOQ6UWT2 76 aa12.74□□□□□ -0.37
DDX55-211ENST00000544429 A0A087WTM6 91 aa12.73□□□□□ -0.37
DDX55-211ENST00000544429 C7orf77A4D0Y5 90 aa12.73□□□□□ -0.37
DDX55-211ENST00000544429 LRCOL1A6NCL2 159 aa12.73□□□□□ -0.37
DDX55-211ENST00000544429 SUMO2P61956 95 aaKnown RBP12.73□□□□□ -0.37
DDX55-211ENST00000544429 TRAV9-1A0A075B6T8 112 aa12.72□□□□□ -0.37
DDX55-211ENST00000544429 ESDP10768 282 aa12.72□□□□□ -0.37
DDX55-211ENST00000544429 PMCHP20382 165 aa12.72□□□□□ -0.37
DDX55-211ENST00000544429 RPL32P62910 135 aaKnown RBP12.72□□□□□ -0.37
DDX55-211ENST00000544429 C20orf203Q8NBC4 194 aa12.72□□□□□ -0.37
DDX55-211ENST00000544429 CLRN3Q8NCR9 226 aa12.72□□□□□ -0.37
DDX55-211ENST00000544429 C20orf78Q9BR46 151 aa12.72□□□□□ -0.37
DDX55-211ENST00000544429 H7C423 109 aa12.71□□□□□ -0.37
DDX55-211ENST00000544429 PPBPP02775 128 aa12.71□□□□□ -0.37
DDX55-211ENST00000544429 ANGP03950 147 aaKnown RBP12.71□□□□□ -0.37
DDX55-211ENST00000544429 CKS2P33552 79 aa12.71□□□□□ -0.37
DDX55-211ENST00000544429 Q0VG73 95 aa12.71□□□□□ -0.37
DDX55-211ENST00000544429 RHEBQ15382 184 aa12.71□□□□□ -0.37
DDX55-211ENST00000544429 MAPKAPK5-AS1Q8N8E1 139 aa12.71□□□□□ -0.37
DDX55-211ENST00000544429 UBE2WQ96B02 151 aa12.71□□□□□ -0.37
DDX55-211ENST00000544429 TM2D2Q9BX73 214 aa12.71□□□□□ -0.37
DDX55-211ENST00000544429 IGLV4-60A0A075B6I1 120 aa12.7□□□□□ -0.38
DDX55-211ENST00000544429 D6R8Y8 96 aa12.7□□□□□ -0.38
DDX55-211ENST00000544429 VCYO14598 125 aa12.7□□□□□ -0.38
DDX55-211ENST00000544429 PHOX2AO14813 284 aa12.7□□□□□ -0.38
DDX55-211ENST00000544429 TNFRSF6BO95407 300 aa12.7□□□□□ -0.38
DDX55-211ENST00000544429 APCSP02743 223 aa12.7□□□□□ -0.38
DDX55-211ENST00000544429 KRTAP10-2P60368 255 aa12.7□□□□□ -0.38
DDX55-211ENST00000544429 COX11Q9Y6N1 276 aa12.69□□□□□ -0.38
DDX55-211ENST00000544429 PSCAO43653 123 aa12.68□□□□□ -0.38
DDX55-211ENST00000544429 NPYP01303 97 aa12.68□□□□□ -0.38
DDX55-211ENST00000544429 SPATA12Q7Z6I5 190 aa12.68□□□□□ -0.38
DDX55-211ENST00000544429 ORMDL3Q8N138 153 aa12.68□□□□□ -0.38
DDX55-211ENST00000544429 LINC00269Q8N2A0 174 aa12.68□□□□□ -0.38
DDX55-211ENST00000544429 RMI2Q96E14 147 aa12.68□□□□□ -0.38
DDX55-211ENST00000544429 DNAH5Q8TE73 4624 aa12.67□□□□□ -0.38
DDX55-211ENST00000544429 UBE2L6O14933 153 aa12.67□□□□□ -0.38
DDX55-211ENST00000544429 MIAQ16674 131 aa12.67□□□□□ -0.38
DDX55-211ENST00000544429 KRTAP26-1Q6PEX3 210 aa12.67□□□□□ -0.38
DDX55-211ENST00000544429 TMEM136Q6ZRR5 245 aa12.67□□□□□ -0.38
DDX55-211ENST00000544429 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.66□□□□□ -0.38
DDX55-211ENST00000544429 IGKV2-29A2NJV5 120 aaPredicted RBP12.66□□□□□ -0.38
DDX55-211ENST00000544429 PRSS47A8MTI9 375 aa12.66□□□□□ -0.38
DDX55-211ENST00000544429 IGKV2D-24A0A075B6R9 120 aa12.65□□□□□ -0.38
DDX55-211ENST00000544429 APOC3P02656 99 aa12.65□□□□□ -0.38
DDX55-211ENST00000544429 CRPP02741 224 aa12.65□□□□□ -0.38
DDX55-211ENST00000544429 FGF6P10767 208 aa12.65□□□□□ -0.38
DDX55-211ENST00000544429 REG3AQ06141 175 aa12.65□□□□□ -0.38
DDX55-211ENST00000544429 WFDC2Q14508 124 aa12.65□□□□□ -0.38
DDX55-211ENST00000544429 MRPL52Q86TS9 123 aaKnown RBP12.65□□□□□ -0.38
DDX55-211ENST00000544429 SMIM2Q9BVW6 85 aa12.65□□□□□ -0.38
DDX55-211ENST00000544429 RPS10P5Q9NQ39 176 aa12.65□□□□□ -0.38
DDX55-211ENST00000544429 LAMTOR2Q9Y2Q5 125 aa12.65□□□□□ -0.38
DDX55-211ENST00000544429 LRP1BQ9NZR2 4599 aa12.65□□□□□ -0.38
DDX55-211ENST00000544429 EREGO14944 169 aa12.64□□□□□ -0.39
DDX55-211ENST00000544429 ZNF25P17030 456 aaPredicted RBP12.64□□□□□ -0.39
DDX55-211ENST00000544429 SVBPQ8N300 66 aa12.64□□□□□ -0.39
DDX55-211ENST00000544429 PRELID3AQ96N28 172 aa12.64□□□□□ -0.39
DDX55-211ENST00000544429 KIR2DL4Q99706 377 aa12.64□□□□□ -0.39
DDX55-211ENST00000544429 PGPEP1Q9NXJ5 209 aa12.64□□□□□ -0.39
DDX55-211ENST00000544429 S100PP25815 95 aa12.63□□□□□ -0.39
DDX55-211ENST00000544429 CDPF1Q6NVV7 123 aa12.63□□□□□ -0.39
DDX55-211ENST00000544429 CLPSL2Q6UWE3 100 aa12.63□□□□□ -0.39
DDX55-211ENST00000544429 C1orf43Q9BWL3 253 aa12.63□□□□□ -0.39
DDX55-211ENST00000544429 SNAPINO95295 136 aa12.62□□□□□ -0.39
DDX55-211ENST00000544429 NDUFA5Q16718 116 aa12.62□□□□□ -0.39
DDX55-211ENST00000544429 Q8N814 137 aa12.62□□□□□ -0.39
DDX55-211ENST00000544429 TRAV8-4A0A0B4J246 113 aa12.61□□□□□ -0.39
DDX55-211ENST00000544429 C16orf90A8MZG2 172 aa12.61□□□□□ -0.39
DDX55-211ENST00000544429 TCAPO15273 167 aa12.61□□□□□ -0.39
DDX55-211ENST00000544429 FCER1GP30273 86 aa12.61□□□□□ -0.39
DDX55-211ENST00000544429 GNB1LQ9BYB4 327 aa12.61□□□□□ -0.39
DDX55-211ENST00000544429 AMMECR1LQ6DCA0 310 aa12.6□□□□□ -0.39
DDX55-211ENST00000544429 CSDC2Q9Y534 153 aaKnown RBP12.6□□□□□ -0.39
DDX55-211ENST00000544429 HLA-DQA1P01909 254 aa12.59□□□□□ -0.39
DDX55-211ENST00000544429 NTN5Q8WTR8 489 aaPredicted RBP12.59□□□□□ -0.39
DDX55-211ENST00000544429 BAALCQ8WXS3 180 aa12.59□□□□□ -0.39
DDX55-211ENST00000544429 FUSP35637 526 aaKnown RBP eCLIP12.58□□□□□ -0.4
DDX55-211ENST00000544429 COX19Q49B96 90 aa12.58□□□□□ -0.4
DDX55-211ENST00000544429 RNASEKQ6P5S7 137 aaKnown RBP12.58□□□□□ -0.4
DDX55-211ENST00000544429 SLC7A5P1Q8MH63 180 aa12.58□□□□□ -0.4
DDX55-211ENST00000544429 TIMM21Q9BVV7 248 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms