RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 NTF3P20783 257 aa17.51■□□□□ 0.39
PDCD2-211ENST00000544336 AMTP48728 403 aa17.51■□□□□ 0.39
PDCD2-211ENST00000544336 PGLYRP4Q96LB8 373 aa17.51■□□□□ 0.39
PDCD2-211ENST00000544336 UBR4Q5T4S7 5183 aa17.51■□□□□ 0.39
PDCD2-211ENST00000544336 SULT1A2P50226 295 aa17.5■□□□□ 0.39
PDCD2-211ENST00000544336 CIRBPQ14011 172 aaKnown RBP17.5■□□□□ 0.39
PDCD2-211ENST00000544336 WDR73Q6P4I2 378 aa17.5■□□□□ 0.39
PDCD2-211ENST00000544336 MED9Q9NWA0 146 aa17.5■□□□□ 0.39
PDCD2-211ENST00000544336 IGKV3OR2-268A0A0C4DH90 116 aa17.49■□□□□ 0.39
PDCD2-211ENST00000544336 TEX46H3BTG2 121 aa17.49■□□□□ 0.39
PDCD2-211ENST00000544336 MEF2BQ02080 365 aaPredicted RBP17.49■□□□□ 0.39
PDCD2-211ENST00000544336 COTL1Q14019 142 aa17.49■□□□□ 0.39
PDCD2-211ENST00000544336 SMIM12Q96EX1 92 aa17.49■□□□□ 0.39
PDCD2-211ENST00000544336 TRBV20OR9-2A0A075B6H5 130 aa17.48■□□□□ 0.39
PDCD2-211ENST00000544336 A0A087WYN8 130 aa17.47■□□□□ 0.39
PDCD2-211ENST00000544336 PDE6DO43924 150 aa17.47■□□□□ 0.39
PDCD2-211ENST00000544336 GAGE12HA6NDE8 117 aa17.46■□□□□ 0.39
PDCD2-211ENST00000544336 TWIST1Q15672 202 aa17.46■□□□□ 0.39
PDCD2-211ENST00000544336 TRAV26-2A0A0B4J265 109 aa17.45■□□□□ 0.38
PDCD2-211ENST00000544336 MT1HL1P0DM35 61 aa17.45■□□□□ 0.38
PDCD2-211ENST00000544336 NUDT10Q8NFP7 164 aa17.45■□□□□ 0.38
PDCD2-211ENST00000544336 SPACA4Q8TDM5 124 aa17.45■□□□□ 0.38
PDCD2-211ENST00000544336 NUDT11Q96G61 164 aa17.45■□□□□ 0.38
PDCD2-211ENST00000544336 BIN3Q9NQY0 253 aa17.45■□□□□ 0.38
PDCD2-211ENST00000544336 CTRLP40313 264 aa17.44■□□□□ 0.38
PDCD2-211ENST00000544336 Q6ZRU5 148 aa17.44■□□□□ 0.38
PDCD2-211ENST00000544336 C9orf62Q8N4C0 152 aa17.44■□□□□ 0.38
PDCD2-211ENST00000544336 C15orf56Q8N910 161 aa17.44■□□□□ 0.38
PDCD2-211ENST00000544336 RNF185Q96GF1 192 aa17.44■□□□□ 0.38
PDCD2-211ENST00000544336 EIF5AL1Q6IS14 154 aaKnown RBP17.43■□□□□ 0.38
PDCD2-211ENST00000544336 GATD1Q8NB37 220 aa17.43■□□□□ 0.38
PDCD2-211ENST00000544336 BCL2P10415 239 aa17.42■□□□□ 0.38
PDCD2-211ENST00000544336 HIGD2BQ4VC39 106 aa17.42■□□□□ 0.38
PDCD2-211ENST00000544336 AMMECR1LQ6DCA0 310 aa17.4■□□□□ 0.38
PDCD2-211ENST00000544336 CFAP161Q6P656 301 aa17.4■□□□□ 0.38
PDCD2-211ENST00000544336 RNASE7Q9H1E1 156 aaKnown RBP17.4■□□□□ 0.38
PDCD2-211ENST00000544336 PHOX2AO14813 284 aa17.39■□□□□ 0.37
PDCD2-211ENST00000544336 COX6A2Q02221 97 aa17.39■□□□□ 0.37
PDCD2-211ENST00000544336 Q6ZNX1 250 aa17.39■□□□□ 0.37
PDCD2-211ENST00000544336 RPL39LQ96EH5 51 aaKnown RBP17.39■□□□□ 0.37
PDCD2-211ENST00000544336 RPP21Q9H633 154 aaKnown RBP17.39■□□□□ 0.37
PDCD2-211ENST00000544336 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.38■□□□□ 0.37
PDCD2-211ENST00000544336 IGKV2-29A2NJV5 120 aaPredicted RBP17.38■□□□□ 0.37
PDCD2-211ENST00000544336 RNASEKQ6P5S7 137 aaKnown RBP17.38■□□□□ 0.37
PDCD2-211ENST00000544336 PLAC8Q9NZF1 115 aa17.38■□□□□ 0.37
PDCD2-211ENST00000544336 RPS10P46783 165 aaKnown RBP17.37■□□□□ 0.37
PDCD2-211ENST00000544336 CHCHD10Q8WYQ3 142 aaPredicted RBP17.37■□□□□ 0.37
PDCD2-211ENST00000544336 CNFNQ9BYD5 112 aa17.37■□□□□ 0.37
PDCD2-211ENST00000544336 IGKV2-24A0A0C4DH68 120 aa17.36■□□□□ 0.37
PDCD2-211ENST00000544336 K7EN84 100 aa17.36■□□□□ 0.37
PDCD2-211ENST00000544336 MAJINQ3KP22 176 aa17.36■□□□□ 0.37
PDCD2-211ENST00000544336 PRSS3P2Q8NHM4 247 aa17.36■□□□□ 0.37
PDCD2-211ENST00000544336 C7orf33Q8WU49 177 aa17.36■□□□□ 0.37
PDCD2-211ENST00000544336 FOXA3P55318 350 aaPredicted RBP17.35■□□□□ 0.37
PDCD2-211ENST00000544336 APCSP02743 223 aa17.34■□□□□ 0.37
PDCD2-211ENST00000544336 OCC1Q8TAD7 63 aa17.34■□□□□ 0.37
PDCD2-211ENST00000544336 NDUFS6O75380 124 aaKnown RBP17.33■□□□□ 0.36
PDCD2-211ENST00000544336 GTSF1Q8WW33 167 aa17.33■□□□□ 0.36
PDCD2-211ENST00000544336 NCR2O95944 276 aa17.32■□□□□ 0.36
PDCD2-211ENST00000544336 SMIM15Q7Z3B0 74 aa17.32■□□□□ 0.36
PDCD2-211ENST00000544336 FGF6P10767 208 aa17.31■□□□□ 0.36
PDCD2-211ENST00000544336 SDHAF1A6NFY7 115 aa17.3■□□□□ 0.36
PDCD2-211ENST00000544336 LYPD6BQ8NI32 183 aa17.3■□□□□ 0.36
PDCD2-211ENST00000544336 GVQW2A0A096LPI5 108 aaPredicted RBP17.29■□□□□ 0.36
PDCD2-211ENST00000544336 STPG4Q8N801 248 aa17.29■□□□□ 0.36
PDCD2-211ENST00000544336 TAGLN2P37802 199 aaKnown RBP17.28■□□□□ 0.36
PDCD2-211ENST00000544336 H7C423 109 aa17.27■□□□□ 0.36
PDCD2-211ENST00000544336 XCL1P47992 114 aa17.27■□□□□ 0.36
PDCD2-211ENST00000544336 FOXI1Q12951 378 aa17.27■□□□□ 0.36
PDCD2-211ENST00000544336 SLC51BQ86UW2 128 aa17.27■□□□□ 0.36
PDCD2-211ENST00000544336 A0A096LNI7 61 aa17.26■□□□□ 0.35
PDCD2-211ENST00000544336 GATCO43716 136 aaKnown RBP17.26■□□□□ 0.35
PDCD2-211ENST00000544336 PMCHP20382 165 aa17.26■□□□□ 0.35
PDCD2-211ENST00000544336 TEX261Q6UWH6 196 aa17.26■□□□□ 0.35
PDCD2-211ENST00000544336 OR5A1Q8NGJ0 315 aa17.25■□□□□ 0.35
PDCD2-211ENST00000544336 LINC00526Q96FQ7 95 aa17.25■□□□□ 0.35
PDCD2-211ENST00000544336 BTF3L4Q96K17 158 aa17.25■□□□□ 0.35
PDCD2-211ENST00000544336 I3L3M4 83 aa17.24■□□□□ 0.35
PDCD2-211ENST00000544336 PRR3P79522 188 aaKnown RBP17.24■□□□□ 0.35
PDCD2-211ENST00000544336 TMEM101Q96IK0 257 aa17.24■□□□□ 0.35
PDCD2-211ENST00000544336 FAM231BA6NCW3 169 aa17.23■□□□□ 0.35
PDCD2-211ENST00000544336 ZNF25P17030 456 aaPredicted RBP17.23■□□□□ 0.35
PDCD2-211ENST00000544336 CCL25O15444 150 aa17.22■□□□□ 0.35
PDCD2-211ENST00000544336 GAS8-AS1O95177 125 aa17.22■□□□□ 0.35
PDCD2-211ENST00000544336 TCTE3Q8IZS6 198 aa17.22■□□□□ 0.35
PDCD2-211ENST00000544336 TMEM242Q9NWH2 141 aa17.22■□□□□ 0.35
PDCD2-211ENST00000544336 LINC00959A0A1B0GUT2 108 aa17.21■□□□□ 0.35
PDCD2-211ENST00000544336 A8MWL6 223 aa17.2■□□□□ 0.34
PDCD2-211ENST00000544336 CEBPGP53567 150 aa17.2■□□□□ 0.34
PDCD2-211ENST00000544336 TSHBP01222 138 aa17.19■□□□□ 0.34
PDCD2-211ENST00000544336 ST20Q9HBF5 79 aa17.19■□□□□ 0.34
PDCD2-211ENST00000544336 IGHV1-58A0A0C4DH39 117 aa17.18■□□□□ 0.34
PDCD2-211ENST00000544336 TRBV6-5A0A0K0K1A5 114 aa17.18■□□□□ 0.34
PDCD2-211ENST00000544336 ODF1Q14990 250 aa17.18■□□□□ 0.34
PDCD2-211ENST00000544336 FAM231DQ6ZW35 169 aa17.18■□□□□ 0.34
PDCD2-211ENST00000544336 CARD19Q96LW7 228 aa17.18■□□□□ 0.34
PDCD2-211ENST00000544336 LINC01600Q96MT4 127 aa17.18■□□□□ 0.34
PDCD2-211ENST00000544336 TNXBP22105 4242 aa17.18■□□□□ 0.34
PDCD2-211ENST00000544336 ESDP10768 282 aa17.17■□□□□ 0.34
PDCD2-211ENST00000544336 BORCS7Q96B45 105 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms