RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 TMEM258P61165 79 aa13.4□□□□□ -0.26
CCT4-204ENST00000544079 NPC2P61916 151 aa13.4□□□□□ -0.26
CCT4-204ENST00000544079 POLEQ07864 2286 aa13.4□□□□□ -0.26
CCT4-204ENST00000544079 ABCA4P78363 2273 aa13.38□□□□□ -0.27
CCT4-204ENST00000544079 BAALC-AS2P0C853 105 aa13.38□□□□□ -0.27
CCT4-204ENST00000544079 LINC00308Q8TCZ7 52 aa13.38□□□□□ -0.27
CCT4-204ENST00000544079 SMG1Q96Q15 3661 aaKnown RBP13.38□□□□□ -0.27
CCT4-204ENST00000544079 USMG5Q96IX5 58 aa13.38□□□□□ -0.27
CCT4-204ENST00000544079 RHPN1-AS1Q9BWJ2 59 aa13.38□□□□□ -0.27
CCT4-204ENST00000544079 IGLV5-45A0A087WSX0 123 aa13.37□□□□□ -0.27
CCT4-204ENST00000544079 H3BUA1 57 aa13.37□□□□□ -0.27
CCT4-204ENST00000544079 TIRAPP58753 221 aa13.37□□□□□ -0.27
CCT4-204ENST00000544079 ZNF415Q09FC8 603 aa13.37□□□□□ -0.27
CCT4-204ENST00000544079 ZFHX4Q86UP3 3567 aa13.36□□□□□ -0.27
CCT4-204ENST00000544079 TRAV25A0A0B4J276 109 aa13.36□□□□□ -0.27
CCT4-204ENST00000544079 RPL18AQ02543 176 aaKnown RBP13.36□□□□□ -0.27
CCT4-204ENST00000544079 C22orf24Q9Y442 160 aa13.36□□□□□ -0.27
CCT4-204ENST00000544079 IGHV1OR15-1A0A075B7D0 117 aa13.36□□□□□ -0.27
CCT4-204ENST00000544079 LY6HO94772 140 aa13.36□□□□□ -0.27
CCT4-204ENST00000544079 TRBV12-3P01733 135 aa13.36□□□□□ -0.27
CCT4-204ENST00000544079 ZFP36P26651 326 aaKnown RBP13.36□□□□□ -0.27
CCT4-204ENST00000544079 SAA4P35542 130 aa13.36□□□□□ -0.27
CCT4-204ENST00000544079 PRORYQ9H606 182 aa13.36□□□□□ -0.27
CCT4-204ENST00000544079 MOB4Q9Y3A3 225 aa13.35□□□□□ -0.27
CCT4-204ENST00000544079 FAM208BQ5VWN6 2430 aa13.35□□□□□ -0.27
CCT4-204ENST00000544079 UBTD1Q9HAC8 227 aa13.34□□□□□ -0.27
CCT4-204ENST00000544079 IGHV3OR16-10A0A075B7F0 116 aa13.34□□□□□ -0.27
CCT4-204ENST00000544079 UBE2D4Q9Y2X8 147 aa13.34□□□□□ -0.27
CCT4-204ENST00000544079 RP1L1Q8IWN7 2480 aaPredicted RBP13.34□□□□□ -0.27
CCT4-204ENST00000544079 A8MZ25 164 aa13.33□□□□□ -0.28
CCT4-204ENST00000544079 hADV29S1A0JD25 119 aa13.33□□□□□ -0.28
CCT4-204ENST00000544079 DPH3Q96FX2 82 aa13.33□□□□□ -0.28
CCT4-204ENST00000544079 IGF2RP11717 2491 aa13.33□□□□□ -0.28
CCT4-204ENST00000544079 K7EMT4 169 aa13.32□□□□□ -0.28
CCT4-204ENST00000544079 SERP2Q8N6R1 65 aa13.32□□□□□ -0.28
CCT4-204ENST00000544079 RNF152Q8N8N0 203 aa13.32□□□□□ -0.28
CCT4-204ENST00000544079 DEFB124Q8NES8 71 aa13.32□□□□□ -0.28
CCT4-204ENST00000544079 LINC01560Q8TB33 94 aa13.32□□□□□ -0.28
CCT4-204ENST00000544079 PF4V1P10720 104 aa13.32□□□□□ -0.28
CCT4-204ENST00000544079 C11orf71Q6IPW1 123 aa13.32□□□□□ -0.28
CCT4-204ENST00000544079 Q6JHZ5 121 aa13.32□□□□□ -0.28
CCT4-204ENST00000544079 OVOL2Q9BRP0 275 aa13.32□□□□□ -0.28
CCT4-204ENST00000544079 LOC400499M0QZD8 3231 aa13.31□□□□□ -0.28
CCT4-204ENST00000544079 IGLV5-39A0A0G2JS06 123 aa13.31□□□□□ -0.28
CCT4-204ENST00000544079 CHCHD7Q9BUK0 85 aa13.31□□□□□ -0.28
CCT4-204ENST00000544079 FBXL19-AS1Q494R0 122 aa13.3□□□□□ -0.28
CCT4-204ENST00000544079 DMXL2Q8TDJ6 3036 aa13.3□□□□□ -0.28
CCT4-204ENST00000544079 IGKV3-7A0A075B6H7 116 aa13.3□□□□□ -0.28
CCT4-204ENST00000544079 UPK3BQ9BT76 320 aa13.3□□□□□ -0.28
CCT4-204ENST00000544079 PF4P02776 101 aa13.29□□□□□ -0.28
CCT4-204ENST00000544079 MALP21145 153 aa13.29□□□□□ -0.28
CCT4-204ENST00000544079 IGHG2P01859 326 aa13.28□□□□□ -0.28
CCT4-204ENST00000544079 CDKN2A-AS1Q9UH64 79 aa13.28□□□□□ -0.28
CCT4-204ENST00000544079 RNASE13Q5GAN3 156 aaKnown RBP13.28□□□□□ -0.28
CCT4-204ENST00000544079 Q8N2B8 174 aa13.28□□□□□ -0.28
CCT4-204ENST00000544079 PIK3CD-AS1Q5SR53 167 aa13.27□□□□□ -0.28
CCT4-204ENST00000544079 PRIMA1Q86XR5 153 aa13.27□□□□□ -0.28
CCT4-204ENST00000544079 Q8NA96 180 aa13.27□□□□□ -0.28
CCT4-204ENST00000544079 Q9H8V8 135 aa13.27□□□□□ -0.29
CCT4-204ENST00000544079 ZFYVE26Q68DK2 2539 aa13.26□□□□□ -0.29
CCT4-204ENST00000544079 FAM19A3Q7Z5A8 133 aa13.26□□□□□ -0.29
CCT4-204ENST00000544079 BAHCC1Q9P281 2608 aa13.26□□□□□ -0.29
CCT4-204ENST00000544079 AKAP13Q12802 2813 aa13.26□□□□□ -0.29
CCT4-204ENST00000544079 RPL28P46779 137 aaKnown RBP13.25□□□□□ -0.29
CCT4-204ENST00000544079 HIST2H2BCQ6DN03 193 aa13.25□□□□□ -0.29
CCT4-204ENST00000544079 HIST2H2BDQ6DRA6 164 aa13.25□□□□□ -0.29
CCT4-204ENST00000544079 SOSTDC1Q6X4U4 206 aa13.25□□□□□ -0.29
CCT4-204ENST00000544079 DNAL4O96015 105 aa13.25□□□□□ -0.29
CCT4-204ENST00000544079 FAM218AQ96MZ4 157 aa13.25□□□□□ -0.29
CCT4-204ENST00000544079 ATRXP46100 2492 aa13.25□□□□□ -0.29
CCT4-204ENST00000544079 OBSCN-AS1Q96MR7 158 aa13.24□□□□□ -0.29
CCT4-204ENST00000544079 PKD1L2Q7Z442 2459 aa13.24□□□□□ -0.29
CCT4-204ENST00000544079 TRAV12-2A0A075B6T6 113 aa13.24□□□□□ -0.29
CCT4-204ENST00000544079 TRAV13-2A0A0B4J235 113 aa13.23□□□□□ -0.29
CCT4-204ENST00000544079 CYSTM1Q9H1C7 97 aa13.23□□□□□ -0.29
CCT4-204ENST00000544079 SNRPD3P62318 126 aaKnown RBP13.23□□□□□ -0.29
CCT4-204ENST00000544079 PCNX1Q96RV3 2341 aa13.22□□□□□ -0.29
CCT4-204ENST00000544079 IGHV3-11P01762 117 aa13.22□□□□□ -0.29
CCT4-204ENST00000544079 NDUFC2-KCTD14E9PQ53 114 aa13.22□□□□□ -0.29
CCT4-204ENST00000544079 LINC00467Q9BRT7 94 aa13.22□□□□□ -0.29
CCT4-204ENST00000544079 TACC2O95359 2948 aa13.21□□□□□ -0.29
CCT4-204ENST00000544079 TRAV13-1A0A0B4J241 112 aa13.21□□□□□ -0.29
CCT4-204ENST00000544079 KLRB1Q12918 225 aa13.21□□□□□ -0.29
CCT4-204ENST00000544079 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.2□□□□□ -0.3
CCT4-204ENST00000544079 IGKV2-29A2NJV5 120 aaPredicted RBP13.2□□□□□ -0.3
CCT4-204ENST00000544079 KIR2DL5BQ8NHK3 375 aa13.2□□□□□ -0.3
CCT4-204ENST00000544079 ZNF625Q96I27 306 aaPredicted RBP13.2□□□□□ -0.3
CCT4-204ENST00000544079 PIEZO2Q9H5I5 2752 aa13.2□□□□□ -0.3
CCT4-204ENST00000544079 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.2□□□□□ -0.3
CCT4-204ENST00000544079 APC2O95996 2303 aa13.19□□□□□ -0.3
CCT4-204ENST00000544079 SPINK13Q1W4C9 94 aa13.19□□□□□ -0.3
CCT4-204ENST00000544079 USP17L23D6RBM5 183 aa13.18□□□□□ -0.3
CCT4-204ENST00000544079 K7EQG2 157 aa13.18□□□□□ -0.3
CCT4-204ENST00000544079 IGLV1-40P01703 118 aa13.18□□□□□ -0.3
CCT4-204ENST00000544079 ASPMQ8IZT6 3477 aa13.18□□□□□ -0.3
CCT4-204ENST00000544079 SMIM1B2RUZ4 78 aa13.18□□□□□ -0.3
CCT4-204ENST00000544079 OXTP01178 125 aa13.17□□□□□ -0.3
CCT4-204ENST00000544079 GRNP28799 593 aaKnown RBP13.17□□□□□ -0.3
CCT4-204ENST00000544079 COX6A2Q02221 97 aa13.17□□□□□ -0.3
CCT4-204ENST00000544079 LINC00242Q5T6M2 205 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms