RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 IBA57-AS1B1ANH7 110 aa11.56□□□□□ -0.56
RABGGTA-203ENST00000543002 TMEM262E9PQX1 116 aa11.56□□□□□ -0.56
RABGGTA-203ENST00000543002 TNFRSF6BO95407 300 aa11.56□□□□□ -0.56
RABGGTA-203ENST00000543002 AMTP48728 403 aa11.56□□□□□ -0.56
RABGGTA-203ENST00000543002 ORMDL3Q8N138 153 aa11.56□□□□□ -0.56
RABGGTA-203ENST00000543002 C20orf78Q9BR46 151 aa11.56□□□□□ -0.56
RABGGTA-203ENST00000543002 TMEM243Q9BU79 118 aa11.56□□□□□ -0.56
RABGGTA-203ENST00000543002 VCYO14598 125 aa11.55□□□□□ -0.56
RABGGTA-203ENST00000543002 PHOX2AO14813 284 aa11.55□□□□□ -0.56
RABGGTA-203ENST00000543002 ATRAIDQ6UW56 229 aa11.55□□□□□ -0.56
RABGGTA-203ENST00000543002 NPYP01303 97 aa11.54□□□□□ -0.56
RABGGTA-203ENST00000543002 RPL32P62910 135 aaKnown RBP11.54□□□□□ -0.56
RABGGTA-203ENST00000543002 GAGE6Q13070 117 aa11.54□□□□□ -0.56
RABGGTA-203ENST00000543002 COX19Q49B96 90 aa11.54□□□□□ -0.56
RABGGTA-203ENST00000543002 LINC00336Q6ZUF6 198 aa11.54□□□□□ -0.56
RABGGTA-203ENST00000543002 PRELID3AQ96N28 172 aa11.54□□□□□ -0.56
RABGGTA-203ENST00000543002 GNB1LQ9BYB4 327 aa11.54□□□□□ -0.56
RABGGTA-203ENST00000543002 TSHBP01222 138 aa11.53□□□□□ -0.56
RABGGTA-203ENST00000543002 HLA-DQA1P01909 254 aa11.53□□□□□ -0.56
RABGGTA-203ENST00000543002 APCSP02743 223 aa11.53□□□□□ -0.56
RABGGTA-203ENST00000543002 LAGE3Q14657 143 aa11.53□□□□□ -0.56
RABGGTA-203ENST00000543002 ELOBQ15370 118 aa11.53□□□□□ -0.56
RABGGTA-203ENST00000543002 MPV17L2Q567V2 206 aa11.53□□□□□ -0.56
RABGGTA-203ENST00000543002 NFE4Q86UQ8 179 aa11.53□□□□□ -0.56
RABGGTA-203ENST00000543002 LAMTOR2Q9Y2Q5 125 aa11.52□□□□□ -0.57
RABGGTA-203ENST00000543002 TGIF2-C20orf24A0A0A6YYL0 155 aa11.51□□□□□ -0.57
RABGGTA-203ENST00000543002 RBX1P62877 108 aa11.51□□□□□ -0.57
RABGGTA-203ENST00000543002 Q6ZRN7 208 aaPredicted RBP11.51□□□□□ -0.57
RABGGTA-203ENST00000543002 KIR2DL4Q99706 377 aa11.51□□□□□ -0.57
RABGGTA-203ENST00000543002 SMIM2Q9BVW6 85 aa11.51□□□□□ -0.57
RABGGTA-203ENST00000543002 KLK12Q9UKR0 248 aa11.51□□□□□ -0.57
RABGGTA-203ENST00000543002 UBE2L6O14933 153 aa11.5□□□□□ -0.57
RABGGTA-203ENST00000543002 MT-ND6P03923 174 aa11.5□□□□□ -0.57
RABGGTA-203ENST00000543002 ESDP10768 282 aa11.5□□□□□ -0.57
RABGGTA-203ENST00000543002 Q8N976 141 aa11.5□□□□□ -0.57
RABGGTA-203ENST00000543002 A0A1B0GUV1 79 aa11.49□□□□□ -0.57
RABGGTA-203ENST00000543002 PRSS29PA6NIE9 313 aa11.49□□□□□ -0.57
RABGGTA-203ENST00000543002 PRSS47A8MTI9 375 aa11.49□□□□□ -0.57
RABGGTA-203ENST00000543002 H7C423 109 aa11.49□□□□□ -0.57
RABGGTA-203ENST00000543002 FCER1GP30273 86 aa11.49□□□□□ -0.57
RABGGTA-203ENST00000543002 TRAV8-3A0A0A6YYJ7 113 aa11.48□□□□□ -0.57
RABGGTA-203ENST00000543002 ANGP03950 147 aaKnown RBP11.48□□□□□ -0.57
RABGGTA-203ENST00000543002 YPEL4Q96NS1 127 aa11.48□□□□□ -0.57
RABGGTA-203ENST00000543002 Q9HAA7 133 aa11.48□□□□□ -0.57
RABGGTA-203ENST00000543002 SMCO4Q9NRQ5 59 aa11.48□□□□□ -0.57
RABGGTA-203ENST00000543002 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.47□□□□□ -0.57
RABGGTA-203ENST00000543002 IGKV2-29A2NJV5 120 aaPredicted RBP11.47□□□□□ -0.57
RABGGTA-203ENST00000543002 TCAPO15273 167 aa11.47□□□□□ -0.57
RABGGTA-203ENST00000543002 KIAA1644Q3SXP7 199 aa11.47□□□□□ -0.57
RABGGTA-203ENST00000543002 MAP1LC3AQ9H492 121 aa11.47□□□□□ -0.57
RABGGTA-203ENST00000543002 TNP2Q05952 138 aa11.46□□□□□ -0.57
RABGGTA-203ENST00000543002 CBLN2Q8IUK8 224 aa11.46□□□□□ -0.57
RABGGTA-203ENST00000543002 C20orf203Q8NBC4 194 aa11.46□□□□□ -0.57
RABGGTA-203ENST00000543002 UBE2WQ96B02 151 aa11.46□□□□□ -0.57
RABGGTA-203ENST00000543002 MRPL18Q9H0U6 180 aaKnown RBP11.46□□□□□ -0.57
RABGGTA-203ENST00000543002 DNAH10Q8IVF4 4471 aa11.46□□□□□ -0.57
RABGGTA-203ENST00000543002 IGLV4-60A0A075B6I1 120 aa11.45□□□□□ -0.58
RABGGTA-203ENST00000543002 FGF6P10767 208 aa11.45□□□□□ -0.58
RABGGTA-203ENST00000543002 Q0VG73 95 aa11.45□□□□□ -0.58
RABGGTA-203ENST00000543002 AMMECR1LQ6DCA0 310 aa11.45□□□□□ -0.58
RABGGTA-203ENST00000543002 ENHOQ6UWT2 76 aa11.45□□□□□ -0.58
RABGGTA-203ENST00000543002 DNAH2Q9P225 4427 aa11.45□□□□□ -0.58
RABGGTA-203ENST00000543002 LOC389332A0A1B0GUA5 103 aa11.44□□□□□ -0.58
RABGGTA-203ENST00000543002 FABP9Q0Z7S8 132 aa11.44□□□□□ -0.58
RABGGTA-203ENST00000543002 TM2D2Q9BX73 214 aa11.44□□□□□ -0.58
RABGGTA-203ENST00000543002 PRR34Q9NV39 138 aa11.44□□□□□ -0.58
RABGGTA-203ENST00000543002 FRAS1Q86XX4 4008 aa11.44□□□□□ -0.58
RABGGTA-203ENST00000543002 CRPP02741 224 aa11.43□□□□□ -0.58
RABGGTA-203ENST00000543002 ZNF25P17030 456 aaPredicted RBP11.43□□□□□ -0.58
RABGGTA-203ENST00000543002 RNASEKQ6P5S7 137 aaKnown RBP11.43□□□□□ -0.58
RABGGTA-203ENST00000543002 MRPL52Q86TS9 123 aaKnown RBP11.43□□□□□ -0.58
RABGGTA-203ENST00000543002 LINC00269Q8N2A0 174 aa11.43□□□□□ -0.58
RABGGTA-203ENST00000543002 Q8N8P6 123 aa11.43□□□□□ -0.58
RABGGTA-203ENST00000543002 RMI2Q96E14 147 aa11.43□□□□□ -0.58
RABGGTA-203ENST00000543002 ALKBH7Q9BT30 221 aaPredicted RBP11.43□□□□□ -0.58
RABGGTA-203ENST00000543002 TRAPPC1Q9Y5R8 145 aa11.43□□□□□ -0.58
RABGGTA-203ENST00000543002 RAB5AP20339 215 aa11.42□□□□□ -0.58
RABGGTA-203ENST00000543002 PSCAO43653 123 aa11.41□□□□□ -0.58
RABGGTA-203ENST00000543002 REG3AQ06141 175 aa11.41□□□□□ -0.58
RABGGTA-203ENST00000543002 MIAQ16674 131 aa11.41□□□□□ -0.58
RABGGTA-203ENST00000543002 TMEM18Q96B42 140 aa11.41□□□□□ -0.58
RABGGTA-203ENST00000543002 NXT2Q9NPJ8 142 aaKnown RBP11.41□□□□□ -0.58
RABGGTA-203ENST00000543002 COX11Q9Y6N1 276 aa11.41□□□□□ -0.58
RABGGTA-203ENST00000543002 DNAH17Q9UFH2 4485 aa11.41□□□□□ -0.58
RABGGTA-203ENST00000543002 IGKV2D-24A0A075B6R9 120 aa11.4□□□□□ -0.58
RABGGTA-203ENST00000543002 A0A1B0GVY2 172 aa11.4□□□□□ -0.58
RABGGTA-203ENST00000543002 SMAGPQ0VAQ4 97 aa11.4□□□□□ -0.58
RABGGTA-203ENST00000543002 CLPSL2Q6UWE3 100 aa11.4□□□□□ -0.58
RABGGTA-203ENST00000543002 TMEM101Q96IK0 257 aa11.4□□□□□ -0.58
RABGGTA-203ENST00000543002 IFI27P40305 119 aaPredicted RBP11.39□□□□□ -0.59
RABGGTA-203ENST00000543002 OR5A1Q8NGJ0 315 aa11.39□□□□□ -0.59
RABGGTA-203ENST00000543002 C1orf43Q9BWL3 253 aa11.39□□□□□ -0.59
RABGGTA-203ENST00000543002 UBE2D4Q9Y2X8 147 aa11.39□□□□□ -0.59
RABGGTA-203ENST00000543002 CSDC2Q9Y534 153 aaKnown RBP11.39□□□□□ -0.59
RABGGTA-203ENST00000543002 K7EMI3 77 aa11.38□□□□□ -0.59
RABGGTA-203ENST00000543002 TIMM21Q9BVV7 248 aa11.38□□□□□ -0.59
RABGGTA-203ENST00000543002 A0A087WTM6 91 aa11.37□□□□□ -0.59
RABGGTA-203ENST00000543002 TRAV8-4A0A0B4J246 113 aa11.37□□□□□ -0.59
RABGGTA-203ENST00000543002 RPL39P62891 51 aaKnown RBP11.37□□□□□ -0.59
RABGGTA-203ENST00000543002 DGAT2L7PQ6IED9 249 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms