RNA–Protein interactions for RNA: ENST00000541982.5

CD4-210, Transcript of CD4 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-210ENST00000541982 NKX2-5P52952 324 aaPredicted RBP9.9□□□□□ -0.82
CD4-210ENST00000541982 CIRBPQ14011 172 aaKnown RBP9.9□□□□□ -0.82
CD4-210ENST00000541982 LYZL1Q6UWQ5 148 aa9.9□□□□□ -0.82
CD4-210ENST00000541982 C9orf62Q8N4C0 152 aa9.9□□□□□ -0.82
CD4-210ENST00000541982 C20orf203Q8NBC4 194 aa9.9□□□□□ -0.82
CD4-210ENST00000541982 TMEM243Q9BU79 118 aa9.9□□□□□ -0.82
CD4-210ENST00000541982 MED9Q9NWA0 146 aa9.9□□□□□ -0.82
CD4-210ENST00000541982 TRBV20OR9-2A0A075B6H5 130 aa9.89□□□□□ -0.83
CD4-210ENST00000541982 NTF3P20783 257 aa9.89□□□□□ -0.83
CD4-210ENST00000541982 BCL2P10415 239 aa9.88□□□□□ -0.83
CD4-210ENST00000541982 TAGLN2P37802 199 aaKnown RBP9.88□□□□□ -0.83
CD4-210ENST00000541982 IGLV4-60A0A075B6I1 120 aa9.87□□□□□ -0.83
CD4-210ENST00000541982 IGLV10-54A0A075B6I4 117 aa9.87□□□□□ -0.83
CD4-210ENST00000541982 CTRLP40313 264 aa9.87□□□□□ -0.83
CD4-210ENST00000541982 CNBPP62633 177 aaKnown RBP9.87□□□□□ -0.83
CD4-210ENST00000541982 NUDT10Q8NFP7 164 aa9.87□□□□□ -0.83
CD4-210ENST00000541982 NUDT11Q96G61 164 aa9.87□□□□□ -0.83
CD4-210ENST00000541982 LINC01600Q96MT4 127 aa9.87□□□□□ -0.83
CD4-210ENST00000541982 CNFNQ9BYD5 112 aa9.87□□□□□ -0.83
CD4-210ENST00000541982 IGHV3-64A0A075B6Q5 118 aa9.86□□□□□ -0.83
CD4-210ENST00000541982 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.86□□□□□ -0.83
CD4-210ENST00000541982 COTL1Q14019 142 aa9.86□□□□□ -0.83
CD4-210ENST00000541982 SLC51BQ86UW2 128 aa9.86□□□□□ -0.83
CD4-210ENST00000541982 TCTE3Q8IZS6 198 aa9.86□□□□□ -0.83
CD4-210ENST00000541982 C7orf33Q8WU49 177 aa9.86□□□□□ -0.83
CD4-210ENST00000541982 A0A087WYN8 130 aa9.85□□□□□ -0.83
CD4-210ENST00000541982 UBE2L6O14933 153 aa9.85□□□□□ -0.83
CD4-210ENST00000541982 GFRA4Q9GZZ7 299 aa9.85□□□□□ -0.83
CD4-210ENST00000541982 AP5S1Q9NUS5 200 aa9.85□□□□□ -0.83
CD4-210ENST00000541982 hDV102S1A0JD36 115 aa9.84□□□□□ -0.83
CD4-210ENST00000541982 AMTP48728 403 aa9.84□□□□□ -0.83
CD4-210ENST00000541982 TWIST1Q15672 202 aa9.84□□□□□ -0.83
CD4-210ENST00000541982 RPP21Q9H633 154 aaKnown RBP9.84□□□□□ -0.83
CD4-210ENST00000541982 SPACA4Q8TDM5 124 aa9.83□□□□□ -0.84
CD4-210ENST00000541982 PHOX2AO14813 284 aa9.82□□□□□ -0.84
CD4-210ENST00000541982 GATD1Q8NB37 220 aa9.82□□□□□ -0.84
CD4-210ENST00000541982 OCC1Q8TAD7 63 aa9.82□□□□□ -0.84
CD4-210ENST00000541982 RNASE7Q9H1E1 156 aaKnown RBP9.82□□□□□ -0.84
CD4-210ENST00000541982 PLAC8Q9NZF1 115 aa9.82□□□□□ -0.84
CD4-210ENST00000541982 K7EN84 100 aa9.81□□□□□ -0.84
CD4-210ENST00000541982 NCR2O95944 276 aa9.81□□□□□ -0.84
CD4-210ENST00000541982 H7C423 109 aa9.8□□□□□ -0.84
CD4-210ENST00000541982 SLPIP03973 132 aa9.8□□□□□ -0.84
CD4-210ENST00000541982 CHTF8P0CG12 524 aa9.8□□□□□ -0.84
CD4-210ENST00000541982 CFAP161Q6P656 301 aa9.8□□□□□ -0.84
CD4-210ENST00000541982 TEX261Q6UWH6 196 aa9.8□□□□□ -0.84
CD4-210ENST00000541982 SMIM15Q7Z3B0 74 aa9.8□□□□□ -0.84
CD4-210ENST00000541982 A0A0J9YXV3 536 aa9.79□□□□□ -0.84
CD4-210ENST00000541982 TMEM250H0YL14 139 aa9.79□□□□□ -0.84
CD4-210ENST00000541982 GTSF1Q8WW33 167 aa9.79□□□□□ -0.84
CD4-210ENST00000541982 TRAV26-2A0A0B4J265 109 aa9.78□□□□□ -0.84
CD4-210ENST00000541982 GAGE12HA6NDE8 117 aa9.78□□□□□ -0.84
CD4-210ENST00000541982 GAS8-AS1O95177 125 aa9.78□□□□□ -0.84
CD4-210ENST00000541982 AMMECR1LQ6DCA0 310 aa9.78□□□□□ -0.84
CD4-210ENST00000541982 REG3GQ6UW15 175 aa9.78□□□□□ -0.84
CD4-210ENST00000541982 Q6ZNX1 250 aa9.78□□□□□ -0.84
CD4-210ENST00000541982 FAM231DQ6ZW35 169 aa9.78□□□□□ -0.84
CD4-210ENST00000541982 C15orf56Q8N910 161 aa9.78□□□□□ -0.84
CD4-210ENST00000541982 RPL39LQ96EH5 51 aaKnown RBP9.78□□□□□ -0.84
CD4-210ENST00000541982 GATCO43716 136 aaKnown RBP9.77□□□□□ -0.85
CD4-210ENST00000541982 APCSP02743 223 aa9.77□□□□□ -0.85
CD4-210ENST00000541982 BLOC1S1P78537 153 aa9.77□□□□□ -0.85
CD4-210ENST00000541982 SDHAF1A6NFY7 115 aa9.76□□□□□ -0.85
CD4-210ENST00000541982 A8MWL6 223 aa9.76□□□□□ -0.85
CD4-210ENST00000541982 FOXA3P55318 350 aaPredicted RBP9.76□□□□□ -0.85
CD4-210ENST00000541982 KRTAP10-8P60410 259 aa9.76□□□□□ -0.85
CD4-210ENST00000541982 PRR3P79522 188 aaKnown RBP9.76□□□□□ -0.85
CD4-210ENST00000541982 IGKV3OR2-268A0A0C4DH90 116 aa9.75□□□□□ -0.85
CD4-210ENST00000541982 FGF6P10767 208 aa9.75□□□□□ -0.85
CD4-210ENST00000541982 ZNF25P17030 456 aaPredicted RBP9.75□□□□□ -0.85
CD4-210ENST00000541982 RPS10P46783 165 aaKnown RBP9.75□□□□□ -0.85
CD4-210ENST00000541982 ODF1Q14990 250 aa9.75□□□□□ -0.85
CD4-210ENST00000541982 CT83Q5H943 113 aa9.75□□□□□ -0.85
CD4-210ENST00000541982 RNASEKQ6P5S7 137 aaKnown RBP9.75□□□□□ -0.85
CD4-210ENST00000541982 SPINK6Q6UWN8 80 aa9.75□□□□□ -0.85
CD4-210ENST00000541982 LYPD6BQ8NI32 183 aa9.75□□□□□ -0.85
CD4-210ENST00000541982 CHCHD10Q8WYQ3 142 aaPredicted RBP9.75□□□□□ -0.85
CD4-210ENST00000541982 FAM210AQ96ND0 272 aa9.75□□□□□ -0.85
CD4-210ENST00000541982 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.74□□□□□ -0.85
CD4-210ENST00000541982 TRBV6-5A0A0K0K1A5 114 aa9.74□□□□□ -0.85
CD4-210ENST00000541982 IGKV2-29A2NJV5 120 aaPredicted RBP9.74□□□□□ -0.85
CD4-210ENST00000541982 I3L3M4 83 aa9.74□□□□□ -0.85
CD4-210ENST00000541982 NDUFS6O75380 124 aaKnown RBP9.73□□□□□ -0.85
CD4-210ENST00000541982 PMCHP20382 165 aa9.73□□□□□ -0.85
CD4-210ENST00000541982 COX6A2Q02221 97 aa9.73□□□□□ -0.85
CD4-210ENST00000541982 MAJINQ3KP22 176 aa9.73□□□□□ -0.85
CD4-210ENST00000541982 OR5A1Q8NGJ0 315 aa9.73□□□□□ -0.85
CD4-210ENST00000541982 GVQW2A0A096LPI5 108 aaPredicted RBP9.72□□□□□ -0.85
CD4-210ENST00000541982 FAM231BA6NCW3 169 aa9.72□□□□□ -0.85
CD4-210ENST00000541982 ESDP10768 282 aa9.72□□□□□ -0.85
CD4-210ENST00000541982 BORCS7Q96B45 105 aa9.72□□□□□ -0.85
CD4-210ENST00000541982 FOXI1Q12951 378 aa9.71□□□□□ -0.86
CD4-210ENST00000541982 HIGD2BQ4VC39 106 aa9.71□□□□□ -0.86
CD4-210ENST00000541982 ALKAL2Q6UX46 152 aa9.71□□□□□ -0.86
CD4-210ENST00000541982 STPG4Q8N801 248 aa9.71□□□□□ -0.86
CD4-210ENST00000541982 TMEM101Q96IK0 257 aa9.71□□□□□ -0.86
CD4-210ENST00000541982 BTF3L4Q96K17 158 aa9.71□□□□□ -0.86
CD4-210ENST00000541982 IGKV2-24A0A0C4DH68 120 aa9.7□□□□□ -0.86
CD4-210ENST00000541982 AKAP14Q86UN6 197 aa9.7□□□□□ -0.86
CD4-210ENST00000541982 PRSS3P2Q8NHM4 247 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms