RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 DGAT2L7PQ6IED9 249 aa6.49□□□□□ -1.37
CLSTN3-203ENST00000534830 RASL11AQ6T310 242 aa6.49□□□□□ -1.37
CLSTN3-203ENST00000534830 C9orf163Q8N9P6 203 aa6.49□□□□□ -1.37
CLSTN3-203ENST00000534830 LYPD6BQ8NI32 183 aa6.49□□□□□ -1.37
CLSTN3-203ENST00000534830 OCC1Q8TAD7 63 aa6.49□□□□□ -1.37
CLSTN3-203ENST00000534830 NIT2Q9NQR4 276 aa6.49□□□□□ -1.37
CLSTN3-203ENST00000534830 IGLV4-60A0A075B6I1 120 aa6.48□□□□□ -1.37
CLSTN3-203ENST00000534830 A0A1B0GVG6 124 aa6.48□□□□□ -1.37
CLSTN3-203ENST00000534830 NKX2-5P52952 324 aaPredicted RBP6.48□□□□□ -1.37
CLSTN3-203ENST00000534830 REG3AQ06141 175 aa6.48□□□□□ -1.37
CLSTN3-203ENST00000534830 GFRA4Q9GZZ7 299 aa6.48□□□□□ -1.37
CLSTN3-203ENST00000534830 TNXBP22105 4242 aa6.48□□□□□ -1.37
CLSTN3-203ENST00000534830 TRAV8-4A0A0B4J246 113 aa6.47□□□□□ -1.37
CLSTN3-203ENST00000534830 HLA-DQA1P01909 254 aa6.47□□□□□ -1.37
CLSTN3-203ENST00000534830 CLPSL2Q6UWE3 100 aa6.47□□□□□ -1.37
CLSTN3-203ENST00000534830 GATD1Q8NB37 220 aa6.47□□□□□ -1.37
CLSTN3-203ENST00000534830 TMEM243Q9BU79 118 aa6.47□□□□□ -1.37
CLSTN3-203ENST00000534830 RNASE7Q9H1E1 156 aaKnown RBP6.47□□□□□ -1.37
CLSTN3-203ENST00000534830 RPP21Q9H633 154 aaKnown RBP6.47□□□□□ -1.37
CLSTN3-203ENST00000534830 MT1HL1P0DM35 61 aa6.46□□□□□ -1.38
CLSTN3-203ENST00000534830 TWIST1Q15672 202 aa6.46□□□□□ -1.38
CLSTN3-203ENST00000534830 SDIM1Q6ZPB5 146 aa6.46□□□□□ -1.38
CLSTN3-203ENST00000534830 CLRN3Q8NCR9 226 aa6.46□□□□□ -1.38
CLSTN3-203ENST00000534830 GTSF1Q8WW33 167 aa6.46□□□□□ -1.38
CLSTN3-203ENST00000534830 TMEM250H0YL14 139 aa6.45□□□□□ -1.38
CLSTN3-203ENST00000534830 NDUFS6O75380 124 aaKnown RBP6.45□□□□□ -1.38
CLSTN3-203ENST00000534830 SLPIP03973 132 aa6.45□□□□□ -1.38
CLSTN3-203ENST00000534830 FOXA3P55318 350 aaPredicted RBP6.45□□□□□ -1.38
CLSTN3-203ENST00000534830 RPL37AP61513 92 aaKnown RBP6.45□□□□□ -1.38
CLSTN3-203ENST00000534830 CNBPP62633 177 aaKnown RBP6.45□□□□□ -1.38
CLSTN3-203ENST00000534830 FAM231DQ6ZW35 169 aa6.45□□□□□ -1.38
CLSTN3-203ENST00000534830 hCG_2014768A0A024R1R8 64 aa6.44□□□□□ -1.38
CLSTN3-203ENST00000534830 IGLV10-54A0A075B6I4 117 aa6.44□□□□□ -1.38
CLSTN3-203ENST00000534830 TRAV26-2A0A0B4J265 109 aa6.44□□□□□ -1.38
CLSTN3-203ENST00000534830 PANO1I0J062 215 aa6.44□□□□□ -1.38
CLSTN3-203ENST00000534830 HNRNPA3P51991 378 aaKnown RBP6.44□□□□□ -1.38
CLSTN3-203ENST00000534830 BLOC1S1P78537 153 aa6.44□□□□□ -1.38
CLSTN3-203ENST00000534830 CIRBPQ14011 172 aaKnown RBP6.44□□□□□ -1.38
CLSTN3-203ENST00000534830 COTL1Q14019 142 aa6.44□□□□□ -1.38
CLSTN3-203ENST00000534830 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.44□□□□□ -1.38
CLSTN3-203ENST00000534830 AMTP48728 403 aa6.43□□□□□ -1.38
CLSTN3-203ENST00000534830 ALKAL2Q6UX46 152 aa6.43□□□□□ -1.38
CLSTN3-203ENST00000534830 RPL39LQ96EH5 51 aaKnown RBP6.43□□□□□ -1.38
CLSTN3-203ENST00000534830 A8MWL6 223 aa6.42□□□□□ -1.38
CLSTN3-203ENST00000534830 H7C423 109 aa6.42□□□□□ -1.38
CLSTN3-203ENST00000534830 UBE2L6O14933 153 aa6.42□□□□□ -1.38
CLSTN3-203ENST00000534830 GATCO43716 136 aaKnown RBP6.42□□□□□ -1.38
CLSTN3-203ENST00000534830 NCR2O95944 276 aa6.42□□□□□ -1.38
CLSTN3-203ENST00000534830 CT83Q5H943 113 aa6.42□□□□□ -1.38
CLSTN3-203ENST00000534830 AKAP14Q86UN6 197 aa6.42□□□□□ -1.38
CLSTN3-203ENST00000534830 TRBV6-5A0A0K0K1A5 114 aa6.41□□□□□ -1.38
CLSTN3-203ENST00000534830 hDV102S1A0JD36 115 aa6.41□□□□□ -1.38
CLSTN3-203ENST00000534830 FAM231BA6NCW3 169 aa6.41□□□□□ -1.38
CLSTN3-203ENST00000534830 GAS8-AS1O95177 125 aa6.41□□□□□ -1.38
CLSTN3-203ENST00000534830 TEX261Q6UWH6 196 aa6.41□□□□□ -1.38
CLSTN3-203ENST00000534830 C15orf56Q8N910 161 aa6.41□□□□□ -1.38
CLSTN3-203ENST00000534830 SDHAF1A6NFY7 115 aa6.4□□□□□ -1.38
CLSTN3-203ENST00000534830 SMIM15Q7Z3B0 74 aa6.4□□□□□ -1.38
CLSTN3-203ENST00000534830 LINC01551Q86U37 167 aa6.4□□□□□ -1.38
CLSTN3-203ENST00000534830 IGHV3-64A0A075B6Q5 118 aa6.39□□□□□ -1.39
CLSTN3-203ENST00000534830 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.39□□□□□ -1.39
CLSTN3-203ENST00000534830 IGKV2-29A2NJV5 120 aaPredicted RBP6.39□□□□□ -1.39
CLSTN3-203ENST00000534830 GAGE12HA6NDE8 117 aa6.39□□□□□ -1.39
CLSTN3-203ENST00000534830 ESDP10768 282 aa6.39□□□□□ -1.39
CLSTN3-203ENST00000534830 POLR2KP53803 58 aaKnown RBP6.39□□□□□ -1.39
CLSTN3-203ENST00000534830 TSKUQ8WUA8 353 aa6.39□□□□□ -1.39
CLSTN3-203ENST00000534830 RNF185Q96GF1 192 aa6.39□□□□□ -1.39
CLSTN3-203ENST00000534830 FAM210AQ96ND0 272 aa6.39□□□□□ -1.39
CLSTN3-203ENST00000534830 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.38□□□□□ -1.39
CLSTN3-203ENST00000534830 HIGD1CA8MV81 97 aa6.38□□□□□ -1.39
CLSTN3-203ENST00000534830 I3L3M4 83 aa6.38□□□□□ -1.39
CLSTN3-203ENST00000534830 APCSP02743 223 aa6.38□□□□□ -1.39
CLSTN3-203ENST00000534830 SRP19P09132 144 aaKnown RBP6.38□□□□□ -1.39
CLSTN3-203ENST00000534830 FGF6P10767 208 aa6.38□□□□□ -1.39
CLSTN3-203ENST00000534830 ZNF25P17030 456 aaPredicted RBP6.38□□□□□ -1.39
CLSTN3-203ENST00000534830 RAB4AP20338 218 aa6.38□□□□□ -1.39
CLSTN3-203ENST00000534830 CFAP161Q6P656 301 aa6.38□□□□□ -1.39
CLSTN3-203ENST00000534830 SPACA4Q8TDM5 124 aa6.38□□□□□ -1.39
CLSTN3-203ENST00000534830 CHCHD10Q8WYQ3 142 aaPredicted RBP6.38□□□□□ -1.39
CLSTN3-203ENST00000534830 TMEM191AQ9H0A3 160 aa6.38□□□□□ -1.39
CLSTN3-203ENST00000534830 OSTCQ9NRP0 149 aa6.38□□□□□ -1.39
CLSTN3-203ENST00000534830 AP5S1Q9NUS5 200 aa6.38□□□□□ -1.39
CLSTN3-203ENST00000534830 A0A087WYN8 130 aa6.37□□□□□ -1.39
CLSTN3-203ENST00000534830 A0A1B0GUT8 65 aa6.37□□□□□ -1.39
CLSTN3-203ENST00000534830 TSHBP01222 138 aa6.37□□□□□ -1.39
CLSTN3-203ENST00000534830 FOXI1Q12951 378 aa6.37□□□□□ -1.39
CLSTN3-203ENST00000534830 Q6ZRU5 148 aa6.37□□□□□ -1.39
CLSTN3-203ENST00000534830 OR5A1Q8NGJ0 315 aa6.37□□□□□ -1.39
CLSTN3-203ENST00000534830 SMIM7Q9BQ49 75 aa6.37□□□□□ -1.39
CLSTN3-203ENST00000534830 EIF5A2Q9GZV4 153 aaKnown RBP6.37□□□□□ -1.39
CLSTN3-203ENST00000534830 V9GYV3 84 aa6.37□□□□□ -1.39
CLSTN3-203ENST00000534830 GVQW2A0A096LPI5 108 aaPredicted RBP6.36□□□□□ -1.39
CLSTN3-203ENST00000534830 IGKV3OR2-268A0A0C4DH90 116 aa6.36□□□□□ -1.39
CLSTN3-203ENST00000534830 TRBV27A0A0K0K1C4 114 aa6.36□□□□□ -1.39
CLSTN3-203ENST00000534830 ZNF727A8MUV8 499 aa6.36□□□□□ -1.39
CLSTN3-203ENST00000534830 CHTF8P0CG12 524 aa6.36□□□□□ -1.39
CLSTN3-203ENST00000534830 PMCHP20382 165 aa6.36□□□□□ -1.39
CLSTN3-203ENST00000534830 RPS10P46783 165 aaKnown RBP6.36□□□□□ -1.39
CLSTN3-203ENST00000534830 CEBPGP53567 150 aa6.36□□□□□ -1.39
CLSTN3-203ENST00000534830 AMMECR1LQ6DCA0 310 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms