RNA–Protein interactions for RNA: ENST00000532872.5

RPS3-218, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-218ENST00000532872 REG3AQ06141 175 aa8.3□□□□□ -1.08
RPS3-218ENST00000532872 WDR73Q6P4I2 378 aa8.3□□□□□ -1.08
RPS3-218ENST00000532872 KRTAP26-1Q6PEX3 210 aa8.3□□□□□ -1.08
RPS3-218ENST00000532872 NUDT10Q8NFP7 164 aa8.3□□□□□ -1.08
RPS3-218ENST00000532872 NUDT11Q96G61 164 aa8.3□□□□□ -1.08
RPS3-218ENST00000532872 PGLYRP4Q96LB8 373 aa8.3□□□□□ -1.08
RPS3-218ENST00000532872 TMEM243Q9BU79 118 aa8.3□□□□□ -1.08
RPS3-218ENST00000532872 NIT2Q9NQR4 276 aa8.3□□□□□ -1.08
RPS3-218ENST00000532872 KRTAP10-4P60372 401 aaPredicted RBP8.29□□□□□ -1.08
RPS3-218ENST00000532872 PEA15Q15121 130 aa8.29□□□□□ -1.08
RPS3-218ENST00000532872 C9orf163Q8N9P6 203 aa8.29□□□□□ -1.08
RPS3-218ENST00000532872 C20orf203Q8NBC4 194 aa8.29□□□□□ -1.08
RPS3-218ENST00000532872 CNFNQ9BYD5 112 aa8.29□□□□□ -1.08
RPS3-218ENST00000532872 IGLV10-54A0A075B6I4 117 aa8.28□□□□□ -1.08
RPS3-218ENST00000532872 TRAV8-4A0A0B4J246 113 aa8.28□□□□□ -1.08
RPS3-218ENST00000532872 TWIST1Q15672 202 aa8.28□□□□□ -1.08
RPS3-218ENST00000532872 FAM74A3Q4VXF1 159 aa8.28□□□□□ -1.08
RPS3-218ENST00000532872 CLRN3Q8NCR9 226 aa8.28□□□□□ -1.08
RPS3-218ENST00000532872 RPP21Q9H633 154 aaKnown RBP8.28□□□□□ -1.08
RPS3-218ENST00000532872 IGLV4-60A0A075B6I1 120 aa8.27□□□□□ -1.09
RPS3-218ENST00000532872 UBE2L6O14933 153 aa8.27□□□□□ -1.09
RPS3-218ENST00000532872 COTL1Q14019 142 aa8.27□□□□□ -1.09
RPS3-218ENST00000532872 RNASE7Q9H1E1 156 aaKnown RBP8.27□□□□□ -1.09
RPS3-218ENST00000532872 K7EN84 100 aa8.26□□□□□ -1.09
RPS3-218ENST00000532872 AMTP48728 403 aa8.26□□□□□ -1.09
RPS3-218ENST00000532872 OCC1Q8TAD7 63 aa8.26□□□□□ -1.09
RPS3-218ENST00000532872 SMIM7Q9BQ49 75 aa8.26□□□□□ -1.09
RPS3-218ENST00000532872 GFRA4Q9GZZ7 299 aa8.26□□□□□ -1.09
RPS3-218ENST00000532872 ZNF727A8MUV8 499 aa8.25□□□□□ -1.09
RPS3-218ENST00000532872 SRP19P09132 144 aaKnown RBP8.25□□□□□ -1.09
RPS3-218ENST00000532872 FAM231DQ6ZW35 169 aa8.25□□□□□ -1.09
RPS3-218ENST00000532872 GATD1Q8NB37 220 aa8.25□□□□□ -1.09
RPS3-218ENST00000532872 TRAV26-2A0A0B4J265 109 aa8.24□□□□□ -1.09
RPS3-218ENST00000532872 hDV102S1A0JD36 115 aa8.24□□□□□ -1.09
RPS3-218ENST00000532872 CEBPGP53567 150 aa8.24□□□□□ -1.09
RPS3-218ENST00000532872 RPL37AP61513 92 aaKnown RBP8.24□□□□□ -1.09
RPS3-218ENST00000532872 CNBPP62633 177 aaKnown RBP8.24□□□□□ -1.09
RPS3-218ENST00000532872 SDIM1Q6ZPB5 146 aa8.24□□□□□ -1.09
RPS3-218ENST00000532872 SMIM15Q7Z3B0 74 aa8.24□□□□□ -1.09
RPS3-218ENST00000532872 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.24□□□□□ -1.09
RPS3-218ENST00000532872 A8MWL6 223 aa8.23□□□□□ -1.09
RPS3-218ENST00000532872 TMEM241Q24JQ0 296 aa8.23□□□□□ -1.09
RPS3-218ENST00000532872 CT83Q5H943 113 aa8.23□□□□□ -1.09
RPS3-218ENST00000532872 GTSF1Q8WW33 167 aa8.23□□□□□ -1.09
RPS3-218ENST00000532872 AP5S1Q9NUS5 200 aa8.23□□□□□ -1.09
RPS3-218ENST00000532872 LRP1Q07954 4544 aaKnown RBP8.22□□□□□ -1.09
RPS3-218ENST00000532872 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.22□□□□□ -1.09
RPS3-218ENST00000532872 FAM231BA6NCW3 169 aa8.22□□□□□ -1.09
RPS3-218ENST00000532872 GATCO43716 136 aaKnown RBP8.22□□□□□ -1.09
RPS3-218ENST00000532872 NCR2O95944 276 aa8.22□□□□□ -1.09
RPS3-218ENST00000532872 OXTP01178 125 aa8.22□□□□□ -1.09
RPS3-218ENST00000532872 CLLU1Q5K131 121 aa8.22□□□□□ -1.09
RPS3-218ENST00000532872 RPL39LQ96EH5 51 aaKnown RBP8.22□□□□□ -1.09
RPS3-218ENST00000532872 PANO1I0J062 215 aa8.21□□□□□ -1.1
RPS3-218ENST00000532872 CIRBPQ14011 172 aaKnown RBP8.21□□□□□ -1.1
RPS3-218ENST00000532872 AMMECR1LQ6DCA0 310 aa8.21□□□□□ -1.1
RPS3-218ENST00000532872 LINC01551Q86U37 167 aa8.21□□□□□ -1.1
RPS3-218ENST00000532872 OSTCQ9NRP0 149 aa8.21□□□□□ -1.1
RPS3-218ENST00000532872 NAT8Q9UHE5 227 aa8.21□□□□□ -1.1
RPS3-218ENST00000532872 IGHV3-64A0A075B6Q5 118 aa8.2□□□□□ -1.1
RPS3-218ENST00000532872 H7C423 109 aa8.2□□□□□ -1.1
RPS3-218ENST00000532872 APCSP02743 223 aa8.2□□□□□ -1.1
RPS3-218ENST00000532872 FOXA3P55318 350 aaPredicted RBP8.2□□□□□ -1.1
RPS3-218ENST00000532872 CFAP161Q6P656 301 aa8.2□□□□□ -1.1
RPS3-218ENST00000532872 IGKV3OR2-268A0A0C4DH90 116 aa8.19□□□□□ -1.1
RPS3-218ENST00000532872 GAGE12HA6NDE8 117 aa8.19□□□□□ -1.1
RPS3-218ENST00000532872 SDHAF1A6NFY7 115 aa8.19□□□□□ -1.1
RPS3-218ENST00000532872 SLPIP03973 132 aa8.19□□□□□ -1.1
RPS3-218ENST00000532872 RNASEKQ6P5S7 137 aaKnown RBP8.19□□□□□ -1.1
RPS3-218ENST00000532872 BORCS7Q96B45 105 aa8.19□□□□□ -1.1
RPS3-218ENST00000532872 FAT3Q8TDW7 4589 aa8.19□□□□□ -1.1
RPS3-218ENST00000532872 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.18□□□□□ -1.1
RPS3-218ENST00000532872 IGKV2-29A2NJV5 120 aaPredicted RBP8.18□□□□□ -1.1
RPS3-218ENST00000532872 FGF6P10767 208 aa8.18□□□□□ -1.1
RPS3-218ENST00000532872 SERTAD4-AS1Q5TG53 156 aa8.18□□□□□ -1.1
RPS3-218ENST00000532872 C15orf56Q8N910 161 aa8.18□□□□□ -1.1
RPS3-218ENST00000532872 RNF185Q96GF1 192 aa8.18□□□□□ -1.1
RPS3-218ENST00000532872 TRBV6-5A0A0K0K1A5 114 aa8.17□□□□□ -1.1
RPS3-218ENST00000532872 I3L3M4 83 aa8.17□□□□□ -1.1
RPS3-218ENST00000532872 ZNF25P17030 456 aaPredicted RBP8.17□□□□□ -1.1
RPS3-218ENST00000532872 PMCHP20382 165 aa8.17□□□□□ -1.1
RPS3-218ENST00000532872 HNRNPA3P51991 378 aaKnown RBP8.17□□□□□ -1.1
RPS3-218ENST00000532872 UQCC3Q6UW78 93 aa8.17□□□□□ -1.1
RPS3-218ENST00000532872 TSKUQ8WUA8 353 aa8.17□□□□□ -1.1
RPS3-218ENST00000532872 CHCHD10Q8WYQ3 142 aaPredicted RBP8.17□□□□□ -1.1
RPS3-218ENST00000532872 ISOC2Q96AB3 205 aa8.17□□□□□ -1.1
RPS3-218ENST00000532872 DPH3Q96FX2 82 aa8.17□□□□□ -1.1
RPS3-218ENST00000532872 PKHD1L1Q86WI1 4243 aa8.17□□□□□ -1.1
RPS3-218ENST00000532872 HIGD1CA8MV81 97 aa8.16□□□□□ -1.1
RPS3-218ENST00000532872 C9JQL5 133 aa8.16□□□□□ -1.1
RPS3-218ENST00000532872 RPL23P62829 140 aaKnown RBP8.16□□□□□ -1.1
RPS3-218ENST00000532872 SRSF3P84103 164 aaKnown RBP8.16□□□□□ -1.1
RPS3-218ENST00000532872 PNRC1Q12796 327 aaPredicted RBP8.16□□□□□ -1.1
RPS3-218ENST00000532872 SPACA4Q8TDM5 124 aa8.16□□□□□ -1.1
RPS3-218ENST00000532872 A0A087WYN8 130 aa8.15□□□□□ -1.1
RPS3-218ENST00000532872 A0A1B0GUT8 65 aa8.15□□□□□ -1.1
RPS3-218ENST00000532872 CHTF8P0CG12 524 aa8.15□□□□□ -1.1
RPS3-218ENST00000532872 RPS10P46783 165 aaKnown RBP8.15□□□□□ -1.1
RPS3-218ENST00000532872 IFITM2Q01629 132 aa8.15□□□□□ -1.1
RPS3-218ENST00000532872 ADIRFQ15847 76 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms