RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 SDIM1Q6ZPB5 146 aa10.81□□□□□ -0.68
CPSF1-207ENST00000531727 SLC51BQ86UW2 128 aa10.81□□□□□ -0.68
CPSF1-207ENST00000531727 CNFNQ9BYD5 112 aa10.81□□□□□ -0.68
CPSF1-207ENST00000531727 GFRA4Q9GZZ7 299 aa10.81□□□□□ -0.68
CPSF1-207ENST00000531727 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.81□□□□□ -0.68
CPSF1-207ENST00000531727 A0A1B0GVG6 124 aa10.8□□□□□ -0.68
CPSF1-207ENST00000531727 UBE2L6O14933 153 aa10.8□□□□□ -0.68
CPSF1-207ENST00000531727 AMTP48728 403 aa10.8□□□□□ -0.68
CPSF1-207ENST00000531727 CNBPP62633 177 aaKnown RBP10.8□□□□□ -0.68
CPSF1-207ENST00000531727 COTL1Q14019 142 aa10.8□□□□□ -0.68
CPSF1-207ENST00000531727 TWIST1Q15672 202 aa10.8□□□□□ -0.68
CPSF1-207ENST00000531727 LRP1Q07954 4544 aaKnown RBP10.79□□□□□ -0.68
CPSF1-207ENST00000531727 FAT3Q8TDW7 4589 aa10.79□□□□□ -0.68
CPSF1-207ENST00000531727 hDV102S1A0JD36 115 aa10.79□□□□□ -0.68
CPSF1-207ENST00000531727 PANO1I0J062 215 aa10.79□□□□□ -0.68
CPSF1-207ENST00000531727 RNASE7Q9H1E1 156 aaKnown RBP10.79□□□□□ -0.68
CPSF1-207ENST00000531727 RPP21Q9H633 154 aaKnown RBP10.79□□□□□ -0.68
CPSF1-207ENST00000531727 hCG_2014768A0A024R1R8 64 aa10.78□□□□□ -0.68
CPSF1-207ENST00000531727 K7EN84 100 aa10.78□□□□□ -0.68
CPSF1-207ENST00000531727 GATD1Q8NB37 220 aa10.78□□□□□ -0.68
CPSF1-207ENST00000531727 CIRBPQ14011 172 aaKnown RBP10.77□□□□□ -0.69
CPSF1-207ENST00000531727 SERTAD4-AS1Q5TG53 156 aa10.77□□□□□ -0.69
CPSF1-207ENST00000531727 OCC1Q8TAD7 63 aa10.77□□□□□ -0.69
CPSF1-207ENST00000531727 AP5S1Q9NUS5 200 aa10.77□□□□□ -0.69
CPSF1-207ENST00000531727 IGHV3-64A0A075B6Q5 118 aa10.76□□□□□ -0.69
CPSF1-207ENST00000531727 TRAV26-2A0A0B4J265 109 aa10.76□□□□□ -0.69
CPSF1-207ENST00000531727 HNRNPA3P51991 378 aaKnown RBP10.76□□□□□ -0.69
CPSF1-207ENST00000531727 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.75□□□□□ -0.69
CPSF1-207ENST00000531727 SLPIP03973 132 aa10.75□□□□□ -0.69
CPSF1-207ENST00000531727 GTSF1Q8WW33 167 aa10.75□□□□□ -0.69
CPSF1-207ENST00000531727 SMIM15Q7Z3B0 74 aa10.74□□□□□ -0.69
CPSF1-207ENST00000531727 NCR2O95944 276 aa10.73□□□□□ -0.69
CPSF1-207ENST00000531727 RPL39LQ96EH5 51 aaKnown RBP10.73□□□□□ -0.69
CPSF1-207ENST00000531727 GAGE12HA6NDE8 117 aa10.72□□□□□ -0.69
CPSF1-207ENST00000531727 TMEM250H0YL14 139 aa10.72□□□□□ -0.69
CPSF1-207ENST00000531727 FOXA3P55318 350 aaPredicted RBP10.72□□□□□ -0.69
CPSF1-207ENST00000531727 TEX261Q6UWH6 196 aa10.72□□□□□ -0.69
CPSF1-207ENST00000531727 C15orf56Q8N910 161 aa10.72□□□□□ -0.69
CPSF1-207ENST00000531727 RNF185Q96GF1 192 aa10.72□□□□□ -0.69
CPSF1-207ENST00000531727 IGKV3OR2-268A0A0C4DH90 116 aa10.71□□□□□ -0.69
CPSF1-207ENST00000531727 H7C423 109 aa10.71□□□□□ -0.69
CPSF1-207ENST00000531727 GATCO43716 136 aaKnown RBP10.71□□□□□ -0.69
CPSF1-207ENST00000531727 AMMECR1LQ6DCA0 310 aa10.71□□□□□ -0.69
CPSF1-207ENST00000531727 CFAP161Q6P656 301 aa10.71□□□□□ -0.69
CPSF1-207ENST00000531727 SPACA4Q8TDM5 124 aa10.71□□□□□ -0.69
CPSF1-207ENST00000531727 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.7□□□□□ -0.7
CPSF1-207ENST00000531727 IGKV2-29A2NJV5 120 aaPredicted RBP10.7□□□□□ -0.7
CPSF1-207ENST00000531727 SDHAF1A6NFY7 115 aa10.7□□□□□ -0.7
CPSF1-207ENST00000531727 A8MWL6 223 aa10.7□□□□□ -0.7
CPSF1-207ENST00000531727 APCSP02743 223 aa10.7□□□□□ -0.7
CPSF1-207ENST00000531727 CHTF8P0CG12 524 aa10.7□□□□□ -0.7
CPSF1-207ENST00000531727 FAM231DQ6ZW35 169 aa10.7□□□□□ -0.7
CPSF1-207ENST00000531727 DPH3Q96FX2 82 aa10.7□□□□□ -0.7
CPSF1-207ENST00000531727 A0A087WYN8 130 aa10.69□□□□□ -0.7
CPSF1-207ENST00000531727 BLOC1S1P78537 153 aa10.69□□□□□ -0.7
CPSF1-207ENST00000531727 RNASEKQ6P5S7 137 aaKnown RBP10.69□□□□□ -0.7
CPSF1-207ENST00000531727 FGF6P10767 208 aa10.68□□□□□ -0.7
CPSF1-207ENST00000531727 CT83Q5H943 113 aa10.68□□□□□ -0.7
CPSF1-207ENST00000531727 ALKAL2Q6UX46 152 aa10.68□□□□□ -0.7
CPSF1-207ENST00000531727 LYPD6BQ8NI32 183 aa10.68□□□□□ -0.7
CPSF1-207ENST00000531727 CHCHD10Q8WYQ3 142 aaPredicted RBP10.68□□□□□ -0.7
CPSF1-207ENST00000531727 HMCN2Q8NDA2 5059 aa10.68□□□□□ -0.7
CPSF1-207ENST00000531727 TRBV6-5A0A0K0K1A5 114 aa10.67□□□□□ -0.7
CPSF1-207ENST00000531727 I3L3M4 83 aa10.67□□□□□ -0.7
CPSF1-207ENST00000531727 RPS10P46783 165 aaKnown RBP10.67□□□□□ -0.7
CPSF1-207ENST00000531727 HIGD2BQ4VC39 106 aa10.67□□□□□ -0.7
CPSF1-207ENST00000531727 AKAP14Q86UN6 197 aa10.67□□□□□ -0.7
CPSF1-207ENST00000531727 PLAC8Q9NZF1 115 aa10.67□□□□□ -0.7
CPSF1-207ENST00000531727 ZNF25P17030 456 aaPredicted RBP10.66□□□□□ -0.7
CPSF1-207ENST00000531727 PMCHP20382 165 aa10.66□□□□□ -0.7
CPSF1-207ENST00000531727 CEBPGP53567 150 aa10.66□□□□□ -0.7
CPSF1-207ENST00000531727 Q6ZRU5 148 aa10.66□□□□□ -0.7
CPSF1-207ENST00000531727 GVQW2A0A096LPI5 108 aaPredicted RBP10.65□□□□□ -0.7
CPSF1-207ENST00000531727 FAM231BA6NCW3 169 aa10.65□□□□□ -0.7
CPSF1-207ENST00000531727 COX6A2Q02221 97 aa10.65□□□□□ -0.7
CPSF1-207ENST00000531727 FOXI1Q12951 378 aa10.65□□□□□ -0.7
CPSF1-207ENST00000531727 OR5A1Q8NGJ0 315 aa10.65□□□□□ -0.7
CPSF1-207ENST00000531727 BORCS7Q96B45 105 aa10.65□□□□□ -0.7
CPSF1-207ENST00000531727 PLA2G2DQ9UNK4 145 aa10.65□□□□□ -0.7
CPSF1-207ENST00000531727 NDUFS6O75380 124 aaKnown RBP10.64□□□□□ -0.71
CPSF1-207ENST00000531727 TMEM101Q96IK0 257 aa10.64□□□□□ -0.71
CPSF1-207ENST00000531727 BTF3L4Q96K17 158 aa10.64□□□□□ -0.71
CPSF1-207ENST00000531727 GAS8-AS1O95177 125 aa10.63□□□□□ -0.71
CPSF1-207ENST00000531727 TSHBP01222 138 aa10.63□□□□□ -0.71
CPSF1-207ENST00000531727 MT1HL1P0DM35 61 aa10.63□□□□□ -0.71
CPSF1-207ENST00000531727 ESDP10768 282 aa10.63□□□□□ -0.71
CPSF1-207ENST00000531727 PRSS3P2Q8NHM4 247 aa10.63□□□□□ -0.71
CPSF1-207ENST00000531727 FAM210AQ96ND0 272 aa10.63□□□□□ -0.71
CPSF1-207ENST00000531727 SMIM7Q9BQ49 75 aa10.63□□□□□ -0.71
CPSF1-207ENST00000531727 ST20Q9HBF5 79 aa10.63□□□□□ -0.71
CPSF1-207ENST00000531727 A0A1B0GUT8 65 aa10.62□□□□□ -0.71
CPSF1-207ENST00000531727 HIGD1CA8MV81 97 aa10.62□□□□□ -0.71
CPSF1-207ENST00000531727 MAJINQ3KP22 176 aa10.62□□□□□ -0.71
CPSF1-207ENST00000531727 LINC01551Q86U37 167 aa10.62□□□□□ -0.71
CPSF1-207ENST00000531727 C7orf33Q8WU49 177 aa10.62□□□□□ -0.71
CPSF1-207ENST00000531727 TSKUQ8WUA8 353 aa10.62□□□□□ -0.71
CPSF1-207ENST00000531727 EIF5A2Q9GZV4 153 aaKnown RBP10.62□□□□□ -0.71
CPSF1-207ENST00000531727 TMEM191AQ9H0A3 160 aa10.62□□□□□ -0.71
CPSF1-207ENST00000531727 TMEM242Q9NWH2 141 aa10.62□□□□□ -0.71
CPSF1-207ENST00000531727 IGKV2-24A0A0C4DH68 120 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms