RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 C1orf43Q9BWL3 253 aa7.33□□□□□ -1.24
SF3B2-208ENST00000529994 IGHV1-24A0A0C4DH33 117 aa7.32□□□□□ -1.24
SF3B2-208ENST00000529994 HLA-DQA1P01909 254 aa7.32□□□□□ -1.24
SF3B2-208ENST00000529994 TMEM97Q5BJF2 176 aa7.32□□□□□ -1.24
SF3B2-208ENST00000529994 LYPD6BQ8NI32 183 aa7.32□□□□□ -1.24
SF3B2-208ENST00000529994 GTSF1Q8WW33 167 aa7.32□□□□□ -1.24
SF3B2-208ENST00000529994 TNXBP22105 4242 aa7.32□□□□□ -1.24
SF3B2-208ENST00000529994 ZNF727A8MUV8 499 aa7.31□□□□□ -1.24
SF3B2-208ENST00000529994 FOXA3P55318 350 aaPredicted RBP7.31□□□□□ -1.24
SF3B2-208ENST00000529994 PKIAP61925 76 aa7.31□□□□□ -1.24
SF3B2-208ENST00000529994 RBX1P62877 108 aa7.31□□□□□ -1.24
SF3B2-208ENST00000529994 Q0VG73 95 aa7.31□□□□□ -1.24
SF3B2-208ENST00000529994 ENHOQ6UWT2 76 aa7.31□□□□□ -1.24
SF3B2-208ENST00000529994 SMIM15Q7Z3B0 74 aa7.31□□□□□ -1.24
SF3B2-208ENST00000529994 FAM210AQ96ND0 272 aa7.31□□□□□ -1.24
SF3B2-208ENST00000529994 SRP19P09132 144 aaKnown RBP7.3□□□□□ -1.24
SF3B2-208ENST00000529994 BORCS7Q96B45 105 aa7.3□□□□□ -1.24
SF3B2-208ENST00000529994 RPL39LQ96EH5 51 aaKnown RBP7.3□□□□□ -1.24
SF3B2-208ENST00000529994 TMEM243Q9BU79 118 aa7.3□□□□□ -1.24
SF3B2-208ENST00000529994 NIT2Q9NQR4 276 aa7.3□□□□□ -1.24
SF3B2-208ENST00000529994 A8MWL6 223 aa7.29□□□□□ -1.24
SF3B2-208ENST00000529994 UBE2L6O14933 153 aa7.29□□□□□ -1.24
SF3B2-208ENST00000529994 AMTP48728 403 aa7.29□□□□□ -1.24
SF3B2-208ENST00000529994 COTL1Q14019 142 aa7.29□□□□□ -1.24
SF3B2-208ENST00000529994 IQCJQ1A5X6 159 aa7.29□□□□□ -1.24
SF3B2-208ENST00000529994 WDR73Q6P4I2 378 aa7.29□□□□□ -1.24
SF3B2-208ENST00000529994 FAM231DQ6ZW35 169 aa7.29□□□□□ -1.24
SF3B2-208ENST00000529994 LINC01551Q86U37 167 aa7.29□□□□□ -1.24
SF3B2-208ENST00000529994 LINC00269Q8N2A0 174 aa7.29□□□□□ -1.24
SF3B2-208ENST00000529994 GATD1Q8NB37 220 aa7.29□□□□□ -1.24
SF3B2-208ENST00000529994 IGLV10-54A0A075B6I4 117 aa7.28□□□□□ -1.24
SF3B2-208ENST00000529994 CNFNQ9BYD5 112 aa7.28□□□□□ -1.24
SF3B2-208ENST00000529994 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.28□□□□□ -1.24
SF3B2-208ENST00000529994 IGKV3OR2-268A0A0C4DH90 116 aa7.27□□□□□ -1.25
SF3B2-208ENST00000529994 USP17L23D6RBM5 183 aa7.27□□□□□ -1.25
SF3B2-208ENST00000529994 PANO1I0J062 215 aa7.27□□□□□ -1.25
SF3B2-208ENST00000529994 ODF1Q14990 250 aa7.27□□□□□ -1.25
SF3B2-208ENST00000529994 MIAQ16674 131 aa7.27□□□□□ -1.25
SF3B2-208ENST00000529994 C14orf177Q52M58 125 aa7.27□□□□□ -1.25
SF3B2-208ENST00000529994 Q6ZRU5 148 aa7.27□□□□□ -1.25
SF3B2-208ENST00000529994 IGLV4-60A0A075B6I1 120 aa7.26□□□□□ -1.25
SF3B2-208ENST00000529994 HIGD1CA8MV81 97 aa7.26□□□□□ -1.25
SF3B2-208ENST00000529994 REG3AQ06141 175 aa7.26□□□□□ -1.25
SF3B2-208ENST00000529994 ADIRFQ15847 76 aa7.26□□□□□ -1.25
SF3B2-208ENST00000529994 CT83Q5H943 113 aa7.26□□□□□ -1.25
SF3B2-208ENST00000529994 TSKUQ8WUA8 353 aa7.26□□□□□ -1.25
SF3B2-208ENST00000529994 GFRA4Q9GZZ7 299 aa7.26□□□□□ -1.25
SF3B2-208ENST00000529994 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.25□□□□□ -1.25
SF3B2-208ENST00000529994 A0A1B0GUT8 65 aa7.25□□□□□ -1.25
SF3B2-208ENST00000529994 IGKV2-29A2NJV5 120 aaPredicted RBP7.25□□□□□ -1.25
SF3B2-208ENST00000529994 SRSF3P84103 164 aaKnown RBP7.25□□□□□ -1.25
SF3B2-208ENST00000529994 TMEM241Q24JQ0 296 aa7.25□□□□□ -1.25
SF3B2-208ENST00000529994 C20orf203Q8NBC4 194 aa7.25□□□□□ -1.25
SF3B2-208ENST00000529994 OSTCQ9NRP0 149 aa7.25□□□□□ -1.25
SF3B2-208ENST00000529994 SDHAF1A6NFY7 115 aa7.24□□□□□ -1.25
SF3B2-208ENST00000529994 C9JQL5 133 aa7.24□□□□□ -1.25
SF3B2-208ENST00000529994 GAS8-AS1O95177 125 aa7.24□□□□□ -1.25
SF3B2-208ENST00000529994 APCSP02743 223 aa7.24□□□□□ -1.25
SF3B2-208ENST00000529994 PRSS1P07477 247 aa7.24□□□□□ -1.25
SF3B2-208ENST00000529994 RPL23P62829 140 aaKnown RBP7.24□□□□□ -1.25
SF3B2-208ENST00000529994 AMMECR1LQ6DCA0 310 aa7.24□□□□□ -1.25
SF3B2-208ENST00000529994 RNASEKQ6P5S7 137 aaKnown RBP7.24□□□□□ -1.25
SF3B2-208ENST00000529994 TEX261Q6UWH6 196 aa7.24□□□□□ -1.25
SF3B2-208ENST00000529994 ISOC2Q96AB3 205 aa7.24□□□□□ -1.25
SF3B2-208ENST00000529994 PRR34Q9NV39 138 aa7.24□□□□□ -1.25
SF3B2-208ENST00000529994 SMKR1H3BMG3 65 aa7.23□□□□□ -1.25
SF3B2-208ENST00000529994 NDUFS6O75380 124 aaKnown RBP7.23□□□□□ -1.25
SF3B2-208ENST00000529994 NCR2O95944 276 aa7.23□□□□□ -1.25
SF3B2-208ENST00000529994 PMCHP20382 165 aa7.23□□□□□ -1.25
SF3B2-208ENST00000529994 PEA15Q15121 130 aa7.23□□□□□ -1.25
SF3B2-208ENST00000529994 AMN1Q8IY45 258 aa7.23□□□□□ -1.25
SF3B2-208ENST00000529994 TMEM242Q9NWH2 141 aa7.23□□□□□ -1.25
SF3B2-208ENST00000529994 NAT8Q9UHE5 227 aa7.23□□□□□ -1.25
SF3B2-208ENST00000529994 V9GYV3 84 aa7.23□□□□□ -1.25
SF3B2-208ENST00000529994 RIGQ13278 110 aa7.22□□□□□ -1.25
SF3B2-208ENST00000529994 FAM74A3Q4VXF1 159 aa7.22□□□□□ -1.25
SF3B2-208ENST00000529994 C9orf163Q8N9P6 203 aa7.22□□□□□ -1.25
SF3B2-208ENST00000529994 NUP35Q8NFH5 326 aa7.22□□□□□ -1.25
SF3B2-208ENST00000529994 ST20Q9HBF5 79 aa7.22□□□□□ -1.25
SF3B2-208ENST00000529994 A0A1B0GUV1 79 aa7.21□□□□□ -1.26
SF3B2-208ENST00000529994 RPS10P46783 165 aaKnown RBP7.21□□□□□ -1.26
SF3B2-208ENST00000529994 DGAT2L7PQ6IED9 249 aa7.21□□□□□ -1.26
SF3B2-208ENST00000529994 KRTAP26-1Q6PEX3 210 aa7.21□□□□□ -1.26
SF3B2-208ENST00000529994 SDIM1Q6ZPB5 146 aa7.21□□□□□ -1.26
SF3B2-208ENST00000529994 DPH3Q96FX2 82 aa7.21□□□□□ -1.26
SF3B2-208ENST00000529994 RNF185Q96GF1 192 aa7.21□□□□□ -1.26
SF3B2-208ENST00000529994 TMEM191AQ9H0A3 160 aa7.21□□□□□ -1.26
SF3B2-208ENST00000529994 hDV102S1A0JD36 115 aa7.2□□□□□ -1.26
SF3B2-208ENST00000529994 GAGE12HA6NDE8 117 aa7.2□□□□□ -1.26
SF3B2-208ENST00000529994 I3L3M4 83 aa7.2□□□□□ -1.26
SF3B2-208ENST00000529994 FGF6P10767 208 aa7.2□□□□□ -1.26
SF3B2-208ENST00000529994 RAB4AP20338 218 aa7.2□□□□□ -1.26
SF3B2-208ENST00000529994 CAMPP49913 170 aa7.2□□□□□ -1.26
SF3B2-208ENST00000529994 NAT8BQ9UHF3 227 aa7.2□□□□□ -1.26
SF3B2-208ENST00000529994 TRAV8-4A0A0B4J246 113 aa7.19□□□□□ -1.26
SF3B2-208ENST00000529994 FAM231BA6NCW3 169 aa7.19□□□□□ -1.26
SF3B2-208ENST00000529994 TSHBP01222 138 aa7.19□□□□□ -1.26
SF3B2-208ENST00000529994 CHTF8P0CG12 524 aa7.19□□□□□ -1.26
SF3B2-208ENST00000529994 MRAP2Q96G30 205 aa7.19□□□□□ -1.26
SF3B2-208ENST00000529994 BTF3L4Q96K17 158 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms