RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 GFRA4Q9GZZ7 299 aa11.16□□□□□ -0.62
CCS-203ENST00000526058 PRR34Q9NV39 138 aa11.16□□□□□ -0.62
CCS-203ENST00000526058 FAM30AQ9NZY2 134 aa11.16□□□□□ -0.62
CCS-203ENST00000526058 V9GYV3 84 aa11.16□□□□□ -0.62
CCS-203ENST00000526058 A0A1B0GUT8 65 aa11.15□□□□□ -0.62
CCS-203ENST00000526058 RPL23P62829 140 aaKnown RBP11.15□□□□□ -0.62
CCS-203ENST00000526058 COTL1Q14019 142 aa11.15□□□□□ -0.62
CCS-203ENST00000526058 LINC01620Q4KN68 170 aa11.15□□□□□ -0.62
CCS-203ENST00000526058 C20orf203Q8NBC4 194 aa11.15□□□□□ -0.62
CCS-203ENST00000526058 BORCS7Q96B45 105 aa11.15□□□□□ -0.62
CCS-203ENST00000526058 TMEM70Q9BUB7 260 aa11.15□□□□□ -0.62
CCS-203ENST00000526058 VPS13BQ7Z7G8 4022 aa11.15□□□□□ -0.62
CCS-203ENST00000526058 FAM231BA6NCW3 169 aa11.14□□□□□ -0.63
CCS-203ENST00000526058 SMR3BP02814 79 aaPredicted RBP11.14□□□□□ -0.63
CCS-203ENST00000526058 PEA15Q15121 130 aa11.14□□□□□ -0.63
CCS-203ENST00000526058 FAM74A3Q4VXF1 159 aa11.14□□□□□ -0.63
CCS-203ENST00000526058 SRRM2Q9UQ35 2752 aaKnown RBP11.14□□□□□ -0.63
CCS-203ENST00000526058 IGLV4-60A0A075B6I1 120 aa11.13□□□□□ -0.63
CCS-203ENST00000526058 EPM2AB3EWF7 344 aa11.13□□□□□ -0.63
CCS-203ENST00000526058 GAS8-AS1O95177 125 aa11.13□□□□□ -0.63
CCS-203ENST00000526058 HLA-DQA1P01909 254 aa11.13□□□□□ -0.63
CCS-203ENST00000526058 AMTP48728 403 aa11.13□□□□□ -0.63
CCS-203ENST00000526058 ADIRFQ15847 76 aa11.13□□□□□ -0.63
CCS-203ENST00000526058 KRTAP26-1Q6PEX3 210 aa11.13□□□□□ -0.63
CCS-203ENST00000526058 A0A1B0GUV1 79 aa11.12□□□□□ -0.63
CCS-203ENST00000526058 UBE2L6O14933 153 aa11.12□□□□□ -0.63
CCS-203ENST00000526058 REG3AQ06141 175 aa11.12□□□□□ -0.63
CCS-203ENST00000526058 NUP35Q8NFH5 326 aa11.12□□□□□ -0.63
CCS-203ENST00000526058 TMEM191AQ9H0A3 160 aa11.12□□□□□ -0.63
CCS-203ENST00000526058 NAT8Q9UHE5 227 aa11.12□□□□□ -0.63
CCS-203ENST00000526058 IGLV10-54A0A075B6I4 117 aa11.11□□□□□ -0.63
CCS-203ENST00000526058 SDHAF1A6NFY7 115 aa11.11□□□□□ -0.63
CCS-203ENST00000526058 RNF185Q96GF1 192 aa11.11□□□□□ -0.63
CCS-203ENST00000526058 USP17L23D6RBM5 183 aa11.1□□□□□ -0.63
CCS-203ENST00000526058 Q5VSD8 79 aa11.1□□□□□ -0.63
CCS-203ENST00000526058 SMDT1Q9H4I9 107 aa11.1□□□□□ -0.63
CCS-203ENST00000526058 RAB4AP20338 218 aa11.09□□□□□ -0.63
CCS-203ENST00000526058 Q6ZSA8 131 aa11.09□□□□□ -0.63
CCS-203ENST00000526058 AMN1Q8IY45 258 aa11.09□□□□□ -0.63
CCS-203ENST00000526058 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.08□□□□□ -0.64
CCS-203ENST00000526058 TRBV6-5A0A0K0K1A5 114 aa11.08□□□□□ -0.64
CCS-203ENST00000526058 IGKV2-29A2NJV5 120 aaPredicted RBP11.08□□□□□ -0.64
CCS-203ENST00000526058 NCR2O95944 276 aa11.08□□□□□ -0.64
CCS-203ENST00000526058 RPS10P46783 165 aaKnown RBP11.08□□□□□ -0.64
CCS-203ENST00000526058 RIGQ13278 110 aa11.08□□□□□ -0.64
CCS-203ENST00000526058 C14orf177Q52M58 125 aa11.08□□□□□ -0.64
CCS-203ENST00000526058 NAT8BQ9UHF3 227 aa11.08□□□□□ -0.64
CCS-203ENST00000526058 I3L3M4 83 aa11.07□□□□□ -0.64
CCS-203ENST00000526058 APCSP02743 223 aa11.07□□□□□ -0.64
CCS-203ENST00000526058 PRSS1P07477 247 aa11.07□□□□□ -0.64
CCS-203ENST00000526058 PMCHP20382 165 aa11.07□□□□□ -0.64
CCS-203ENST00000526058 TRAV8-4A0A0B4J246 113 aa11.06□□□□□ -0.64
CCS-203ENST00000526058 SMIM27A0A1W2PRY6 76 aa11.06□□□□□ -0.64
CCS-203ENST00000526058 SMKR1H3BMG3 65 aa11.06□□□□□ -0.64
CCS-203ENST00000526058 ST20Q9HBF5 79 aa11.06□□□□□ -0.64
CCS-203ENST00000526058 POLR2KP53803 58 aaKnown RBP11.05□□□□□ -0.64
CCS-203ENST00000526058 AMMECR1LQ6DCA0 310 aa11.05□□□□□ -0.64
CCS-203ENST00000526058 MRAP2Q96G30 205 aa11.05□□□□□ -0.64
CCS-203ENST00000526058 IGKV3OR2-268A0A0C4DH90 116 aa11.04□□□□□ -0.64
CCS-203ENST00000526058 TSHBP01222 138 aa11.04□□□□□ -0.64
CCS-203ENST00000526058 FGF6P10767 208 aa11.04□□□□□ -0.64
CCS-203ENST00000526058 RNASEKQ6P5S7 137 aaKnown RBP11.04□□□□□ -0.64
CCS-203ENST00000526058 TMEM242Q9NWH2 141 aa11.04□□□□□ -0.64
CCS-203ENST00000526058 H7C423 109 aa11.03□□□□□ -0.64
CCS-203ENST00000526058 CAMPP49913 170 aa11.03□□□□□ -0.64
CCS-203ENST00000526058 FAM229AH3BQW9 127 aa11.02□□□□□ -0.65
CCS-203ENST00000526058 INAFM2P0DMQ5 153 aa11.02□□□□□ -0.65
CCS-203ENST00000526058 ESDP10768 282 aa11.02□□□□□ -0.65
CCS-203ENST00000526058 FAM104BQ5XKR9 115 aa11.02□□□□□ -0.65
CCS-203ENST00000526058 NRACQ8N912 160 aa11.02□□□□□ -0.65
CCS-203ENST00000526058 MYCBP2O75592 4640 aa11.02□□□□□ -0.65
CCS-203ENST00000526058 TRBV27A0A0K0K1C4 114 aa11.01□□□□□ -0.65
CCS-203ENST00000526058 MRPL51Q4U2R6 128 aaKnown RBP11.01□□□□□ -0.65
CCS-203ENST00000526058 SCXQ7RTU7 201 aa11.01□□□□□ -0.65
CCS-203ENST00000526058 RAB14P61106 215 aa11□□□□□ -0.65
CCS-203ENST00000526058 DGAT2L7PQ6IED9 249 aa11□□□□□ -0.65
CCS-203ENST00000526058 FLG2Q5D862 2391 aaPredicted RBP11□□□□□ -0.65
CCS-203ENST00000526058 GAGE12HA6NDE8 117 aa10.99□□□□□ -0.65
CCS-203ENST00000526058 MRPL54Q6P161 138 aaKnown RBP10.99□□□□□ -0.65
CCS-203ENST00000526058 CLRN3Q8NCR9 226 aa10.99□□□□□ -0.65
CCS-203ENST00000526058 CHAC1Q9BUX1 264 aa10.99□□□□□ -0.65
CCS-203ENST00000526058 A0A1B0GW15 77 aa10.98□□□□□ -0.65
CCS-203ENST00000526058 hDV102S1A0JD36 115 aa10.98□□□□□ -0.65
CCS-203ENST00000526058 VCYO14598 125 aa10.98□□□□□ -0.65
CCS-203ENST00000526058 ZNF25P17030 456 aaPredicted RBP10.98□□□□□ -0.65
CCS-203ENST00000526058 SUMO2P61956 95 aaKnown RBP10.98□□□□□ -0.65
CCS-203ENST00000526058 C9orf163Q8N9P6 203 aa10.98□□□□□ -0.65
CCS-203ENST00000526058 CIRBP-AS1Q8TBR5 109 aa10.98□□□□□ -0.65
CCS-203ENST00000526058 CHCHD10Q8WYQ3 142 aaPredicted RBP10.98□□□□□ -0.65
CCS-203ENST00000526058 A0A1B0GXF2 115 aa10.97□□□□□ -0.65
CCS-203ENST00000526058 PPP1R17O96001 155 aa10.97□□□□□ -0.65
CCS-203ENST00000526058 LINC00528Q8N1L1 170 aa10.97□□□□□ -0.65
CCS-203ENST00000526058 TMEM101Q96IK0 257 aa10.97□□□□□ -0.65
CCS-203ENST00000526058 BTF3L4Q96K17 158 aa10.97□□□□□ -0.65
CCS-203ENST00000526058 C7orf77A4D0Y5 90 aa10.96□□□□□ -0.65
CCS-203ENST00000526058 SLPIP03973 132 aa10.96□□□□□ -0.65
CCS-203ENST00000526058 FCER1GP30273 86 aa10.96□□□□□ -0.65
CCS-203ENST00000526058 CKS2P33552 79 aa10.96□□□□□ -0.65
CCS-203ENST00000526058 HBBP68871 147 aa10.96□□□□□ -0.65
CCS-203ENST00000526058 C15orf56Q8N910 161 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms