RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 OR5C1Q8NGR4 320 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 DCANP1Q8TF63 244 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 TMEM147Q9BVK8 224 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 SCRT1Q9BWW7 348 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 GGTLC1Q9BX51 225 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 SEC11CQ9BY50 192 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 SMIM3Q9BZL3 60 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 MED28Q9H204 178 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 SH3BGRL3Q9H299 93 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 NPVFQ9HCQ7 196 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 HUWE1Q7Z6Z7 4374 aaKnown RBP2.23□□□□□ -2.05
CD44-219ENST00000525685 PRKDCP78527 4128 aaKnown RBP2.23□□□□□ -2.05
CD44-219ENST00000525685 WNK1Q9H4A3 2382 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 APCSP02743 223 aa2.22□□□□□ -2.05
CD44-219ENST00000525685 PFN1P07737 140 aaKnown RBP2.22□□□□□ -2.05
CD44-219ENST00000525685 ZNF688P0C7X2 276 aa2.22□□□□□ -2.05
CD44-219ENST00000525685 RPL7P18124 248 aaKnown RBP2.22□□□□□ -2.05
CD44-219ENST00000525685 EMP1P54849 157 aa2.22□□□□□ -2.05
CD44-219ENST00000525685 DEFB131AP59861 70 aa2.22□□□□□ -2.05
CD44-219ENST00000525685 HBG1P69891 147 aa2.22□□□□□ -2.05
CD44-219ENST00000525685 HBG2P69892 147 aa2.22□□□□□ -2.05
CD44-219ENST00000525685 ZNF266Q14584 549 aa2.22□□□□□ -2.05
CD44-219ENST00000525685 MIC13Q5XKP0 118 aa2.22□□□□□ -2.05
CD44-219ENST00000525685 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.22□□□□□ -2.05
CD44-219ENST00000525685 PATE2Q6UY27 113 aa2.22□□□□□ -2.05
CD44-219ENST00000525685 ZNF705AQ6ZN79 300 aaPredicted RBP2.22□□□□□ -2.05
CD44-219ENST00000525685 NEGR1Q7Z3B1 354 aa2.22□□□□□ -2.05
CD44-219ENST00000525685 C5orf17Q8NAS9 161 aa2.22□□□□□ -2.05
CD44-219ENST00000525685 TM2D3Q9BRN9 247 aa2.22□□□□□ -2.05
CD44-219ENST00000525685 ANAPC13Q9BS18 74 aa2.22□□□□□ -2.05
CD44-219ENST00000525685 SHANK2-AS3Q9BTD1 123 aa2.22□□□□□ -2.05
CD44-219ENST00000525685 NPCDR1Q9BY65 106 aa2.22□□□□□ -2.05
CD44-219ENST00000525685 SAMD10Q9BYL1 202 aa2.22□□□□□ -2.05
CD44-219ENST00000525685 WDR61Q9GZS3 305 aaKnown RBP2.22□□□□□ -2.05
CD44-219ENST00000525685 SLC25A31Q9H0C2 315 aa2.22□□□□□ -2.05
CD44-219ENST00000525685 GTSF1LQ9H1H1 148 aa2.22□□□□□ -2.05
CD44-219ENST00000525685 HIGD1AQ9Y241 93 aa2.22□□□□□ -2.05
CD44-219ENST00000525685 PXMP4Q9Y6I8 212 aa2.22□□□□□ -2.05
CD44-219ENST00000525685 VWFP04275 2813 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 FXYD6-FXYD2A0A087WZ82 144 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 LOC102724200A0A096LPH7 203 aaPredicted RBP2.21□□□□□ -2.06
CD44-219ENST00000525685 TRAV8-2A0A0B4J237 113 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 TRAV5A0A0B4J249 113 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 KNCNA6PVL3 124 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.21□□□□□ -2.06
CD44-219ENST00000525685 H7BYZ3 331 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 COX7A2P2O60397 106 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 HYPMO75409 117 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 HBE1P02100 147 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 GALR1P47211 349 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 PSMB3P49720 205 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 CMC4P56277 68 aaPredicted RBP2.21□□□□□ -2.06
CD44-219ENST00000525685 NDUFA6P56556 154 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 DEFB1P60022 68 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 PSG9Q00887 426 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 MEF2BQ02080 365 aaPredicted RBP2.21□□□□□ -2.06
CD44-219ENST00000525685 MOBPQ13875 183 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 LGALSLQ3ZCW2 172 aaPredicted RBP2.21□□□□□ -2.06
CD44-219ENST00000525685 PSMG4Q5JS54 123 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 C10orf113Q5VZT2 155 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 SPATA31B1PQ5VZV4 182 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 IGFL1Q6UW32 110 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 ALKAL2Q6UX46 152 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 FOXI2Q6ZQN5 318 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 FAM231DQ6ZW35 169 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 LINC00305Q7Z4B0 112 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 C1orf158Q8N1D5 194 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 OR2T35Q8NGX2 323 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 BLNKQ8WV28 456 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 MBD3L1Q8WWY6 194 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 RMI2Q96E14 147 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 AQP10Q96PS8 301 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 ZNF471Q9BX82 626 aaPredicted RBP2.21□□□□□ -2.06
CD44-219ENST00000525685 KCNIP2Q9NS61 270 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 SLC39A9Q9NUM3 307 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 ZNF586Q9NXT0 402 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 CYSLTR1Q9Y271 337 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 U3KQK5 164 aa2.21□□□□□ -2.06
CD44-219ENST00000525685 C9JAW5 83 aa2.2□□□□□ -2.06
CD44-219ENST00000525685 C17orf112F2Z3M2 114 aa2.2□□□□□ -2.06
CD44-219ENST00000525685 ISLRO14498 428 aa2.2□□□□□ -2.06
CD44-219ENST00000525685 IGLC2P0DOY2 106 aa2.2□□□□□ -2.06
CD44-219ENST00000525685 PRB4P10163 310 aaPredicted RBP2.2□□□□□ -2.06
CD44-219ENST00000525685 HLA-DRB4P13762 266 aa2.2□□□□□ -2.06
CD44-219ENST00000525685 CXCL2P19875 107 aa2.2□□□□□ -2.06
CD44-219ENST00000525685 HLA-DMBP28068 263 aa2.2□□□□□ -2.06
CD44-219ENST00000525685 GNG5P63218 68 aa2.2□□□□□ -2.06
CD44-219ENST00000525685 DEFB135Q30KP9 77 aa2.2□□□□□ -2.06
CD44-219ENST00000525685 GDF5OSQ5U4N7 250 aa2.2□□□□□ -2.06
CD44-219ENST00000525685 NTM-AS1Q6ZSK4 140 aa2.2□□□□□ -2.06
CD44-219ENST00000525685 GOLT1AQ6ZVE7 132 aa2.2□□□□□ -2.06
CD44-219ENST00000525685 MIR17HGQ75NE6 70 aa2.2□□□□□ -2.06
CD44-219ENST00000525685 SCGB1C1Q8TD33 95 aa2.2□□□□□ -2.06
CD44-219ENST00000525685 BORCS7Q96B45 105 aa2.2□□□□□ -2.06
CD44-219ENST00000525685 FAM167A-AS1Q96KT0 104 aa2.2□□□□□ -2.06
CD44-219ENST00000525685 HIST1H2BLQ99880 126 aa2.2□□□□□ -2.06
CD44-219ENST00000525685 SLC50A1Q9BRV3 221 aa2.2□□□□□ -2.06
CD44-219ENST00000525685 DERL1Q9BUN8 251 aa2.2□□□□□ -2.06
CD44-219ENST00000525685 MRPL32Q9BYC8 188 aaKnown RBP2.2□□□□□ -2.06
CD44-219ENST00000525685 VAX2Q9UIW0 290 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms