RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 H7C423 109 aa8.37□□□□□ -1.07
CCS-202ENST00000525435 PMCHP20382 165 aa8.37□□□□□ -1.07
CCS-202ENST00000525435 SUMO2P61956 95 aaKnown RBP8.37□□□□□ -1.07
CCS-202ENST00000525435 TMEM136Q6ZRR5 245 aa8.37□□□□□ -1.07
CCS-202ENST00000525435 ORMDL3Q8N138 153 aa8.37□□□□□ -1.07
CCS-202ENST00000525435 TMEM243Q9BU79 118 aa8.37□□□□□ -1.07
CCS-202ENST00000525435 TRAV8-3A0A0A6YYJ7 113 aa8.36□□□□□ -1.07
CCS-202ENST00000525435 A0A1B0GUV1 79 aa8.36□□□□□ -1.07
CCS-202ENST00000525435 RTL8CO15255 209 aa8.36□□□□□ -1.07
CCS-202ENST00000525435 TCAPO15273 167 aa8.36□□□□□ -1.07
CCS-202ENST00000525435 IGHV3-30P01768 117 aa8.36□□□□□ -1.07
CCS-202ENST00000525435 IGHV3-33P01772 117 aa8.36□□□□□ -1.07
CCS-202ENST00000525435 IGHV3-30-3P0DP02 117 aa8.36□□□□□ -1.07
CCS-202ENST00000525435 IGHV3-30-5P0DP03 117 aa8.36□□□□□ -1.07
CCS-202ENST00000525435 GNB1LQ9BYB4 327 aa8.36□□□□□ -1.07
CCS-202ENST00000525435 D6R8Y8 96 aa8.35□□□□□ -1.07
CCS-202ENST00000525435 SMKR1H3BMG3 65 aa8.35□□□□□ -1.07
CCS-202ENST00000525435 TNFRSF6BO95407 300 aa8.35□□□□□ -1.07
CCS-202ENST00000525435 AMTP48728 403 aa8.35□□□□□ -1.07
CCS-202ENST00000525435 KIR2DL4Q99706 377 aa8.35□□□□□ -1.07
CCS-202ENST00000525435 PRSS47A8MTI9 375 aa8.34□□□□□ -1.07
CCS-202ENST00000525435 HLA-DQA1P01909 254 aa8.34□□□□□ -1.07
CCS-202ENST00000525435 ATRAIDQ6UW56 229 aa8.34□□□□□ -1.07
CCS-202ENST00000525435 UBE2L6O14933 153 aa8.33□□□□□ -1.08
CCS-202ENST00000525435 TSHBP01222 138 aa8.33□□□□□ -1.08
CCS-202ENST00000525435 APCSP02743 223 aa8.33□□□□□ -1.08
CCS-202ENST00000525435 MT-ND6P03923 174 aa8.33□□□□□ -1.08
CCS-202ENST00000525435 ESDP10768 282 aa8.33□□□□□ -1.08
CCS-202ENST00000525435 Q0VG73 95 aa8.33□□□□□ -1.08
CCS-202ENST00000525435 PRELID3AQ96N28 172 aa8.33□□□□□ -1.08
CCS-202ENST00000525435 TM2D2Q9BX73 214 aa8.33□□□□□ -1.08
CCS-202ENST00000525435 COX11Q9Y6N1 276 aa8.33□□□□□ -1.08
CCS-202ENST00000525435 EPPK1P58107 5090 aaKnown RBP8.33□□□□□ -1.08
CCS-202ENST00000525435 PRSS29PA6NIE9 313 aa8.32□□□□□ -1.08
CCS-202ENST00000525435 RBX1P62877 108 aa8.32□□□□□ -1.08
CCS-202ENST00000525435 GAGE6Q13070 117 aa8.32□□□□□ -1.08
CCS-202ENST00000525435 MPV17L2Q567V2 206 aa8.32□□□□□ -1.08
CCS-202ENST00000525435 Q6ZRN7 208 aaPredicted RBP8.32□□□□□ -1.08
CCS-202ENST00000525435 RMI2Q96E14 147 aa8.32□□□□□ -1.08
CCS-202ENST00000525435 KLK12Q9UKR0 248 aa8.32□□□□□ -1.08
CCS-202ENST00000525435 NPYP01303 97 aa8.31□□□□□ -1.08
CCS-202ENST00000525435 ZNF25P17030 456 aaPredicted RBP8.31□□□□□ -1.08
CCS-202ENST00000525435 FCER1GP30273 86 aa8.31□□□□□ -1.08
CCS-202ENST00000525435 SMAGPQ0VAQ4 97 aa8.31□□□□□ -1.08
CCS-202ENST00000525435 Q8N3U1 123 aa8.31□□□□□ -1.08
CCS-202ENST00000525435 SMIM2Q9BVW6 85 aa8.31□□□□□ -1.08
CCS-202ENST00000525435 SMCO4Q9NRQ5 59 aa8.31□□□□□ -1.08
CCS-202ENST00000525435 K7EMI3 77 aa8.3□□□□□ -1.08
CCS-202ENST00000525435 ANGP03950 147 aaKnown RBP8.3□□□□□ -1.08
CCS-202ENST00000525435 MAP1LC3AQ9H492 121 aa8.3□□□□□ -1.08
CCS-202ENST00000525435 PRR34Q9NV39 138 aa8.3□□□□□ -1.08
CCS-202ENST00000525435 BIRC6Q9NR09 4857 aa8.29□□□□□ -1.08
CCS-202ENST00000525435 RAB5AP20339 215 aa8.29□□□□□ -1.08
CCS-202ENST00000525435 MIAQ16674 131 aa8.29□□□□□ -1.08
CCS-202ENST00000525435 AMMECR1LQ6DCA0 310 aa8.29□□□□□ -1.08
CCS-202ENST00000525435 MRPL52Q86TS9 123 aaKnown RBP8.29□□□□□ -1.08
CCS-202ENST00000525435 Q8N976 141 aa8.29□□□□□ -1.08
CCS-202ENST00000525435 DEFB104AQ8WTQ1 72 aa8.29□□□□□ -1.08
CCS-202ENST00000525435 TMEM18Q96B42 140 aa8.29□□□□□ -1.08
CCS-202ENST00000525435 CSDC2Q9Y534 153 aaKnown RBP8.29□□□□□ -1.08
CCS-202ENST00000525435 DNAH10Q8IVF4 4471 aa8.28□□□□□ -1.08
CCS-202ENST00000525435 TGIF2-C20orf24A0A0A6YYL0 155 aa8.28□□□□□ -1.08
CCS-202ENST00000525435 CRPP02741 224 aa8.28□□□□□ -1.08
CCS-202ENST00000525435 FGF6P10767 208 aa8.28□□□□□ -1.08
CCS-202ENST00000525435 TNP2Q05952 138 aa8.28□□□□□ -1.08
CCS-202ENST00000525435 ENHOQ6UWT2 76 aa8.28□□□□□ -1.08
CCS-202ENST00000525435 C20orf203Q8NBC4 194 aa8.28□□□□□ -1.08
CCS-202ENST00000525435 UBE2WQ96B02 151 aa8.28□□□□□ -1.08
CCS-202ENST00000525435 YPEL4Q96NS1 127 aa8.28□□□□□ -1.08
CCS-202ENST00000525435 Q9HAA7 133 aa8.28□□□□□ -1.08
CCS-202ENST00000525435 NXT2Q9NPJ8 142 aaKnown RBP8.28□□□□□ -1.08
CCS-202ENST00000525435 DNAH2Q9P225 4427 aa8.28□□□□□ -1.08
CCS-202ENST00000525435 TRAV8-4A0A0B4J246 113 aa8.27□□□□□ -1.09
CCS-202ENST00000525435 EREGO14944 169 aa8.27□□□□□ -1.09
CCS-202ENST00000525435 PSCAO43653 123 aa8.27□□□□□ -1.09
CCS-202ENST00000525435 FABP9Q0Z7S8 132 aa8.27□□□□□ -1.09
CCS-202ENST00000525435 LINC00269Q8N2A0 174 aa8.27□□□□□ -1.09
CCS-202ENST00000525435 Q8N8P6 123 aa8.27□□□□□ -1.09
CCS-202ENST00000525435 TMEM101Q96IK0 257 aa8.27□□□□□ -1.09
CCS-202ENST00000525435 TIMM21Q9BVV7 248 aa8.27□□□□□ -1.09
CCS-202ENST00000525435 MRPL18Q9H0U6 180 aaKnown RBP8.27□□□□□ -1.09
CCS-202ENST00000525435 IGLV4-60A0A075B6I1 120 aa8.26□□□□□ -1.09
CCS-202ENST00000525435 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.26□□□□□ -1.09
CCS-202ENST00000525435 A0A1B0GVY2 172 aa8.26□□□□□ -1.09
CCS-202ENST00000525435 IGKV2-29A2NJV5 120 aaPredicted RBP8.26□□□□□ -1.09
CCS-202ENST00000525435 G0S2P27469 103 aa8.26□□□□□ -1.09
CCS-202ENST00000525435 REG3AQ06141 175 aa8.26□□□□□ -1.09
CCS-202ENST00000525435 KIAA1644Q3SXP7 199 aa8.26□□□□□ -1.09
CCS-202ENST00000525435 RNASEKQ6P5S7 137 aaKnown RBP8.26□□□□□ -1.09
CCS-202ENST00000525435 ALKBH7Q9BT30 221 aaPredicted RBP8.26□□□□□ -1.09
CCS-202ENST00000525435 C1orf43Q9BWL3 253 aa8.26□□□□□ -1.09
CCS-202ENST00000525435 TRAPPC1Q9Y5R8 145 aa8.26□□□□□ -1.09
CCS-202ENST00000525435 FRAS1Q86XX4 4008 aa8.26□□□□□ -1.09
CCS-202ENST00000525435 LOC389332A0A1B0GUA5 103 aa8.25□□□□□ -1.09
CCS-202ENST00000525435 DGAT2L7PQ6IED9 249 aa8.25□□□□□ -1.09
CCS-202ENST00000525435 OR5A1Q8NGJ0 315 aa8.25□□□□□ -1.09
CCS-202ENST00000525435 IGKV2D-24A0A075B6R9 120 aa8.24□□□□□ -1.09
CCS-202ENST00000525435 A0A087WTM6 91 aa8.24□□□□□ -1.09
CCS-202ENST00000525435 ORMDL2Q53FV1 153 aa8.24□□□□□ -1.09
CCS-202ENST00000525435 CDC42SE2Q9NRR3 84 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms