RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 SMDT1Q9H4I9 107 aa12.21□□□□□ -0.45
TSPAN4-215ENST00000525334 NAT8Q9UHE5 227 aa12.21□□□□□ -0.45
TSPAN4-215ENST00000525334 COTL1Q14019 142 aa12.2□□□□□ -0.46
TSPAN4-215ENST00000525334 C1orf43Q9BWL3 253 aa12.2□□□□□ -0.46
TSPAN4-215ENST00000525334 XGP55808 180 aa12.19□□□□□ -0.46
TSPAN4-215ENST00000525334 CLPSL2Q6UWE3 100 aa12.19□□□□□ -0.46
TSPAN4-215ENST00000525334 LINC00269Q8N2A0 174 aa12.19□□□□□ -0.46
TSPAN4-215ENST00000525334 PRR34Q9NV39 138 aa12.19□□□□□ -0.46
TSPAN4-215ENST00000525334 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.18□□□□□ -0.46
TSPAN4-215ENST00000525334 AMTP48728 403 aa12.18□□□□□ -0.46
TSPAN4-215ENST00000525334 MIAQ16674 131 aa12.18□□□□□ -0.46
TSPAN4-215ENST00000525334 NUP35Q8NFH5 326 aa12.18□□□□□ -0.46
TSPAN4-215ENST00000525334 TMEM191AQ9H0A3 160 aa12.18□□□□□ -0.46
TSPAN4-215ENST00000525334 DNAH8Q96JB1 4490 aa12.17□□□□□ -0.46
TSPAN4-215ENST00000525334 GAS8-AS1O95177 125 aa12.16□□□□□ -0.46
TSPAN4-215ENST00000525334 C20orf203Q8NBC4 194 aa12.16□□□□□ -0.46
TSPAN4-215ENST00000525334 RNF185Q96GF1 192 aa12.16□□□□□ -0.46
TSPAN4-215ENST00000525334 IGLV4-60A0A075B6I1 120 aa12.15□□□□□ -0.46
TSPAN4-215ENST00000525334 A0A1B0GUV1 79 aa12.15□□□□□ -0.46
TSPAN4-215ENST00000525334 SDHAF1A6NFY7 115 aa12.15□□□□□ -0.46
TSPAN4-215ENST00000525334 UBE2L6O14933 153 aa12.15□□□□□ -0.46
TSPAN4-215ENST00000525334 RIGQ13278 110 aa12.15□□□□□ -0.46
TSPAN4-215ENST00000525334 AMN1Q8IY45 258 aa12.15□□□□□ -0.46
TSPAN4-215ENST00000525334 NAT8BQ9UHF3 227 aa12.15□□□□□ -0.46
TSPAN4-215ENST00000525334 TRBV6-5A0A0K0K1A5 114 aa12.14□□□□□ -0.47
TSPAN4-215ENST00000525334 HLA-DQA1P01909 254 aa12.14□□□□□ -0.47
TSPAN4-215ENST00000525334 RAB4AP20338 218 aa12.14□□□□□ -0.47
TSPAN4-215ENST00000525334 REG3AQ06141 175 aa12.14□□□□□ -0.47
TSPAN4-215ENST00000525334 TMEM70Q9BUB7 260 aa12.14□□□□□ -0.47
TSPAN4-215ENST00000525334 FAT1Q14517 4588 aa12.14□□□□□ -0.47
TSPAN4-215ENST00000525334 SMIM27A0A1W2PRY6 76 aa12.13□□□□□ -0.47
TSPAN4-215ENST00000525334 NCR2O95944 276 aa12.13□□□□□ -0.47
TSPAN4-215ENST00000525334 KRTAP26-1Q6PEX3 210 aa12.13□□□□□ -0.47
TSPAN4-215ENST00000525334 APCSP02743 223 aa12.12□□□□□ -0.47
TSPAN4-215ENST00000525334 HAMPP81172 84 aa12.12□□□□□ -0.47
TSPAN4-215ENST00000525334 MRAP2Q96G30 205 aa12.12□□□□□ -0.47
TSPAN4-215ENST00000525334 IGLV10-54A0A075B6I4 117 aa12.11□□□□□ -0.47
TSPAN4-215ENST00000525334 RPS10P46783 165 aaKnown RBP12.11□□□□□ -0.47
TSPAN4-215ENST00000525334 RAB14P61106 215 aa12.11□□□□□ -0.47
TSPAN4-215ENST00000525334 ST20Q9HBF5 79 aa12.11□□□□□ -0.47
TSPAN4-215ENST00000525334 FAM30AQ9NZY2 134 aa12.11□□□□□ -0.47
TSPAN4-215ENST00000525334 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.1□□□□□ -0.47
TSPAN4-215ENST00000525334 IGKV2-29A2NJV5 120 aaPredicted RBP12.1□□□□□ -0.47
TSPAN4-215ENST00000525334 USP17L23D6RBM5 183 aa12.1□□□□□ -0.47
TSPAN4-215ENST00000525334 I3L3M4 83 aa12.1□□□□□ -0.47
TSPAN4-215ENST00000525334 PMCHP20382 165 aa12.1□□□□□ -0.47
TSPAN4-215ENST00000525334 LINC01620Q4KN68 170 aa12.1□□□□□ -0.47
TSPAN4-215ENST00000525334 C14orf177Q52M58 125 aa12.1□□□□□ -0.47
TSPAN4-215ENST00000525334 SMKR1H3BMG3 65 aa12.09□□□□□ -0.47
TSPAN4-215ENST00000525334 TRAV8-4A0A0B4J246 113 aa12.08□□□□□ -0.48
TSPAN4-215ENST00000525334 EPM2AB3EWF7 344 aa12.08□□□□□ -0.48
TSPAN4-215ENST00000525334 TSHBP01222 138 aa12.08□□□□□ -0.48
TSPAN4-215ENST00000525334 CAMPP49913 170 aa12.08□□□□□ -0.48
TSPAN4-215ENST00000525334 AMMECR1LQ6DCA0 310 aa12.08□□□□□ -0.48
TSPAN4-215ENST00000525334 TMEM242Q9NWH2 141 aa12.08□□□□□ -0.48
TSPAN4-215ENST00000525334 H7C423 109 aa12.07□□□□□ -0.48
TSPAN4-215ENST00000525334 POLR2KP53803 58 aaKnown RBP12.07□□□□□ -0.48
TSPAN4-215ENST00000525334 FAM104BQ5XKR9 115 aa12.07□□□□□ -0.48
TSPAN4-215ENST00000525334 Q6ZSA8 131 aa12.07□□□□□ -0.48
TSPAN4-215ENST00000525334 TRBV27A0A0K0K1C4 114 aa12.06□□□□□ -0.48
TSPAN4-215ENST00000525334 A0A1B0GW15 77 aa12.06□□□□□ -0.48
TSPAN4-215ENST00000525334 FGF6P10767 208 aa12.06□□□□□ -0.48
TSPAN4-215ENST00000525334 RNASEKQ6P5S7 137 aaKnown RBP12.06□□□□□ -0.48
TSPAN4-215ENST00000525334 NRACQ8N912 160 aa12.06□□□□□ -0.48
TSPAN4-215ENST00000525334 SMR3BP02814 79 aaPredicted RBP12.05□□□□□ -0.48
TSPAN4-215ENST00000525334 PRSS1P07477 247 aa12.05□□□□□ -0.48
TSPAN4-215ENST00000525334 ESDP10768 282 aa12.05□□□□□ -0.48
TSPAN4-215ENST00000525334 MRPL51Q4U2R6 128 aaKnown RBP12.05□□□□□ -0.48
TSPAN4-215ENST00000525334 CLLU1Q5K131 121 aa12.05□□□□□ -0.48
TSPAN4-215ENST00000525334 MRPL54Q6P161 138 aaKnown RBP12.05□□□□□ -0.48
TSPAN4-215ENST00000525334 IGKV3OR2-268A0A0C4DH90 116 aa12.04□□□□□ -0.48
TSPAN4-215ENST00000525334 PPP1R17O96001 155 aa12.04□□□□□ -0.48
TSPAN4-215ENST00000525334 Q5VSD8 79 aa12.04□□□□□ -0.48
TSPAN4-215ENST00000525334 A0A1B0GXF2 115 aa12.03□□□□□ -0.48
TSPAN4-215ENST00000525334 ZNF25P17030 456 aaPredicted RBP12.03□□□□□ -0.48
TSPAN4-215ENST00000525334 SUMO2P61956 95 aaKnown RBP12.03□□□□□ -0.48
TSPAN4-215ENST00000525334 HBBP68871 147 aa12.03□□□□□ -0.48
TSPAN4-215ENST00000525334 VCYO14598 125 aa12.02□□□□□ -0.49
TSPAN4-215ENST00000525334 PPP1R2P9O14990 202 aa12.02□□□□□ -0.49
TSPAN4-215ENST00000525334 IFITM2Q01629 132 aa12.02□□□□□ -0.49
TSPAN4-215ENST00000525334 PNRC1Q12796 327 aaPredicted RBP12.02□□□□□ -0.49
TSPAN4-215ENST00000525334 LINC00862A6NCI5 91 aa12.01□□□□□ -0.49
TSPAN4-215ENST00000525334 S100A8P05109 93 aa12.01□□□□□ -0.49
TSPAN4-215ENST00000525334 TMEM101Q96IK0 257 aa12.01□□□□□ -0.49
TSPAN4-215ENST00000525334 BTF3L4Q96K17 158 aa12.01□□□□□ -0.49
TSPAN4-215ENST00000525334 C7orf77A4D0Y5 90 aa12□□□□□ -0.49
TSPAN4-215ENST00000525334 GAGE12HA6NDE8 117 aa12□□□□□ -0.49
TSPAN4-215ENST00000525334 F8W036 122 aa12□□□□□ -0.49
TSPAN4-215ENST00000525334 FCER1GP30273 86 aa12□□□□□ -0.49
TSPAN4-215ENST00000525334 CKS2P33552 79 aa12□□□□□ -0.49
TSPAN4-215ENST00000525334 CLRN3Q8NCR9 226 aa12□□□□□ -0.49
TSPAN4-215ENST00000525334 VPS13BQ7Z7G8 4022 aa12□□□□□ -0.49
TSPAN4-215ENST00000525334 DGAT2L7PQ6IED9 249 aa11.99□□□□□ -0.49
TSPAN4-215ENST00000525334 MRPL52Q86TS9 123 aaKnown RBP11.99□□□□□ -0.49
TSPAN4-215ENST00000525334 OR5A1Q8NGJ0 315 aa11.99□□□□□ -0.49
TSPAN4-215ENST00000525334 CHCHD10Q8WYQ3 142 aaPredicted RBP11.99□□□□□ -0.49
TSPAN4-215ENST00000525334 TRBV24-1A0A075B6N3 115 aa11.98□□□□□ -0.49
TSPAN4-215ENST00000525334 hDV102S1A0JD36 115 aa11.98□□□□□ -0.49
TSPAN4-215ENST00000525334 D6R8Y8 96 aa11.98□□□□□ -0.49
TSPAN4-215ENST00000525334 MT-ND4LP03901 98 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms