RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 V9GYV3 84 aa11.74□□□□□ -0.53
TRAPPC9-211ENST00000521700 A0A1B0GUT8 65 aa11.73□□□□□ -0.53
TRAPPC9-211ENST00000521700 FAM231BA6NCW3 169 aa11.73□□□□□ -0.53
TRAPPC9-211ENST00000521700 RPL23P62829 140 aaKnown RBP11.73□□□□□ -0.53
TRAPPC9-211ENST00000521700 COTL1Q14019 142 aa11.73□□□□□ -0.53
TRAPPC9-211ENST00000521700 PEA15Q15121 130 aa11.73□□□□□ -0.53
TRAPPC9-211ENST00000521700 CLPSL2Q6UWE3 100 aa11.73□□□□□ -0.53
TRAPPC9-211ENST00000521700 BORCS7Q96B45 105 aa11.73□□□□□ -0.53
TRAPPC9-211ENST00000521700 FAM30AQ9NZY2 134 aa11.73□□□□□ -0.53
TRAPPC9-211ENST00000521700 DNAH8Q96JB1 4490 aa11.72□□□□□ -0.53
TRAPPC9-211ENST00000521700 A0A1B0GUV1 79 aa11.72□□□□□ -0.53
TRAPPC9-211ENST00000521700 HAMPP81172 84 aa11.72□□□□□ -0.53
TRAPPC9-211ENST00000521700 C20orf203Q8NBC4 194 aa11.72□□□□□ -0.53
TRAPPC9-211ENST00000521700 IGLV4-60A0A075B6I1 120 aa11.71□□□□□ -0.53
TRAPPC9-211ENST00000521700 AMTP48728 403 aa11.71□□□□□ -0.53
TRAPPC9-211ENST00000521700 KRTAP26-1Q6PEX3 210 aa11.71□□□□□ -0.53
TRAPPC9-211ENST00000521700 SMDT1Q9H4I9 107 aa11.71□□□□□ -0.53
TRAPPC9-211ENST00000521700 NAT8Q9UHE5 227 aa11.71□□□□□ -0.53
TRAPPC9-211ENST00000521700 EPM2AB3EWF7 344 aa11.7□□□□□ -0.54
TRAPPC9-211ENST00000521700 GAS8-AS1O95177 125 aa11.7□□□□□ -0.54
TRAPPC9-211ENST00000521700 REG3AQ06141 175 aa11.7□□□□□ -0.54
TRAPPC9-211ENST00000521700 ADIRFQ15847 76 aa11.7□□□□□ -0.54
TRAPPC9-211ENST00000521700 TMEM191AQ9H0A3 160 aa11.7□□□□□ -0.54
TRAPPC9-211ENST00000521700 FAT1Q14517 4588 aa11.7□□□□□ -0.54
TRAPPC9-211ENST00000521700 SDHAF1A6NFY7 115 aa11.69□□□□□ -0.54
TRAPPC9-211ENST00000521700 UBE2L6O14933 153 aa11.69□□□□□ -0.54
TRAPPC9-211ENST00000521700 SMR3BP02814 79 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC9-211ENST00000521700 LINC01620Q4KN68 170 aa11.69□□□□□ -0.54
TRAPPC9-211ENST00000521700 NUP35Q8NFH5 326 aa11.69□□□□□ -0.54
TRAPPC9-211ENST00000521700 RNF185Q96GF1 192 aa11.69□□□□□ -0.54
TRAPPC9-211ENST00000521700 TRBV6-5A0A0K0K1A5 114 aa11.68□□□□□ -0.54
TRAPPC9-211ENST00000521700 HLA-DQA1P01909 254 aa11.68□□□□□ -0.54
TRAPPC9-211ENST00000521700 RAB4AP20338 218 aa11.68□□□□□ -0.54
TRAPPC9-211ENST00000521700 USP17L23D6RBM5 183 aa11.67□□□□□ -0.54
TRAPPC9-211ENST00000521700 NCR2O95944 276 aa11.67□□□□□ -0.54
TRAPPC9-211ENST00000521700 RIGQ13278 110 aa11.67□□□□□ -0.54
TRAPPC9-211ENST00000521700 C14orf177Q52M58 125 aa11.67□□□□□ -0.54
TRAPPC9-211ENST00000521700 Q6ZSA8 131 aa11.67□□□□□ -0.54
TRAPPC9-211ENST00000521700 IGLV10-54A0A075B6I4 117 aa11.66□□□□□ -0.54
TRAPPC9-211ENST00000521700 AMN1Q8IY45 258 aa11.66□□□□□ -0.54
TRAPPC9-211ENST00000521700 NAT8BQ9UHF3 227 aa11.66□□□□□ -0.54
TRAPPC9-211ENST00000521700 TRAV8-4A0A0B4J246 113 aa11.65□□□□□ -0.54
TRAPPC9-211ENST00000521700 I3L3M4 83 aa11.65□□□□□ -0.54
TRAPPC9-211ENST00000521700 PMCHP20382 165 aa11.65□□□□□ -0.54
TRAPPC9-211ENST00000521700 Q5VSD8 79 aa11.65□□□□□ -0.54
TRAPPC9-211ENST00000521700 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC9-211ENST00000521700 SMIM27A0A1W2PRY6 76 aa11.64□□□□□ -0.55
TRAPPC9-211ENST00000521700 IGKV2-29A2NJV5 120 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC9-211ENST00000521700 APCSP02743 223 aa11.64□□□□□ -0.55
TRAPPC9-211ENST00000521700 PRSS1P07477 247 aa11.64□□□□□ -0.55
TRAPPC9-211ENST00000521700 RPS10P46783 165 aaKnown RBP11.64□□□□□ -0.55
TRAPPC9-211ENST00000521700 MRAP2Q96G30 205 aa11.64□□□□□ -0.55
TRAPPC9-211ENST00000521700 ST20Q9HBF5 79 aa11.64□□□□□ -0.55
TRAPPC9-211ENST00000521700 H7C423 109 aa11.63□□□□□ -0.55
TRAPPC9-211ENST00000521700 POLR2KP53803 58 aaKnown RBP11.63□□□□□ -0.55
TRAPPC9-211ENST00000521700 SMKR1H3BMG3 65 aa11.62□□□□□ -0.55
TRAPPC9-211ENST00000521700 TSHBP01222 138 aa11.62□□□□□ -0.55
TRAPPC9-211ENST00000521700 FGF6P10767 208 aa11.61□□□□□ -0.55
TRAPPC9-211ENST00000521700 ESDP10768 282 aa11.61□□□□□ -0.55
TRAPPC9-211ENST00000521700 AMMECR1LQ6DCA0 310 aa11.61□□□□□ -0.55
TRAPPC9-211ENST00000521700 RNASEKQ6P5S7 137 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-211ENST00000521700 FAM229AH3BQW9 127 aa11.6□□□□□ -0.55
TRAPPC9-211ENST00000521700 DGAT2L7PQ6IED9 249 aa11.6□□□□□ -0.55
TRAPPC9-211ENST00000521700 TMEM242Q9NWH2 141 aa11.6□□□□□ -0.55
TRAPPC9-211ENST00000521700 TRBV27A0A0K0K1C4 114 aa11.59□□□□□ -0.55
TRAPPC9-211ENST00000521700 INAFM2P0DMQ5 153 aa11.59□□□□□ -0.55
TRAPPC9-211ENST00000521700 CAMPP49913 170 aa11.59□□□□□ -0.55
TRAPPC9-211ENST00000521700 FAM104BQ5XKR9 115 aa11.59□□□□□ -0.55
TRAPPC9-211ENST00000521700 NRACQ8N912 160 aa11.59□□□□□ -0.55
TRAPPC9-211ENST00000521700 IGKV3OR2-268A0A0C4DH90 116 aa11.58□□□□□ -0.56
TRAPPC9-211ENST00000521700 RAB14P61106 215 aa11.58□□□□□ -0.56
TRAPPC9-211ENST00000521700 MRPL51Q4U2R6 128 aaKnown RBP11.58□□□□□ -0.56
TRAPPC9-211ENST00000521700 CLRN3Q8NCR9 226 aa11.58□□□□□ -0.56
TRAPPC9-211ENST00000521700 A0A1B0GW15 77 aa11.57□□□□□ -0.56
TRAPPC9-211ENST00000521700 VCYO14598 125 aa11.57□□□□□ -0.56
TRAPPC9-211ENST00000521700 PPP1R17O96001 155 aa11.57□□□□□ -0.56
TRAPPC9-211ENST00000521700 SCXQ7RTU7 201 aa11.57□□□□□ -0.56
TRAPPC9-211ENST00000521700 CHAC1Q9BUX1 264 aa11.57□□□□□ -0.56
TRAPPC9-211ENST00000521700 VPS13BQ7Z7G8 4022 aa11.56□□□□□ -0.56
TRAPPC9-211ENST00000521700 GAGE12HA6NDE8 117 aa11.56□□□□□ -0.56
TRAPPC9-211ENST00000521700 ZNF25P17030 456 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC9-211ENST00000521700 C9orf163Q8N9P6 203 aa11.56□□□□□ -0.56
TRAPPC9-211ENST00000521700 hDV102S1A0JD36 115 aa11.55□□□□□ -0.56
TRAPPC9-211ENST00000521700 SUMO2P61956 95 aaKnown RBP11.55□□□□□ -0.56
TRAPPC9-211ENST00000521700 MRPL54Q6P161 138 aaKnown RBP11.55□□□□□ -0.56
TRAPPC9-211ENST00000521700 TMEM101Q96IK0 257 aa11.55□□□□□ -0.56
TRAPPC9-211ENST00000521700 BTF3L4Q96K17 158 aa11.55□□□□□ -0.56
TRAPPC9-211ENST00000521700 A0A1B0GXF2 115 aa11.54□□□□□ -0.56
TRAPPC9-211ENST00000521700 LINC00862A6NCI5 91 aa11.54□□□□□ -0.56
TRAPPC9-211ENST00000521700 OR5A1Q8NGJ0 315 aa11.54□□□□□ -0.56
TRAPPC9-211ENST00000521700 CIRBP-AS1Q8TBR5 109 aa11.54□□□□□ -0.56
TRAPPC9-211ENST00000521700 CHCHD10Q8WYQ3 142 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC9-211ENST00000521700 C7orf77A4D0Y5 90 aa11.53□□□□□ -0.56
TRAPPC9-211ENST00000521700 SLPIP03973 132 aa11.53□□□□□ -0.56
TRAPPC9-211ENST00000521700 FCER1GP30273 86 aa11.53□□□□□ -0.56
TRAPPC9-211ENST00000521700 CKS2P33552 79 aa11.53□□□□□ -0.56
TRAPPC9-211ENST00000521700 HBBP68871 147 aa11.53□□□□□ -0.56
TRAPPC9-211ENST00000521700 MRPL52Q86TS9 123 aaKnown RBP11.53□□□□□ -0.56
TRAPPC9-211ENST00000521700 LINC00528Q8N1L1 170 aa11.53□□□□□ -0.56
TRAPPC9-211ENST00000521700 TRBV24-1A0A075B6N3 115 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms