RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 RPS10P46783 165 aaKnown RBP9.61□□□□□ -0.87
NUP54-216ENST00000514901 AMTP48728 403 aa9.61□□□□□ -0.87
NUP54-216ENST00000514901 POLR2KP53803 58 aaKnown RBP9.61□□□□□ -0.87
NUP54-216ENST00000514901 NRACQ8N912 160 aa9.61□□□□□ -0.87
NUP54-216ENST00000514901 C20orf78Q9BR46 151 aa9.61□□□□□ -0.87
NUP54-216ENST00000514901 TMEM70Q9BUB7 260 aa9.61□□□□□ -0.87
NUP54-216ENST00000514901 RPS10P5Q9NQ39 176 aa9.61□□□□□ -0.87
NUP54-216ENST00000514901 TRBV27A0A0K0K1C4 114 aa9.6□□□□□ -0.87
NUP54-216ENST00000514901 SMKR1H3BMG3 65 aa9.6□□□□□ -0.87
NUP54-216ENST00000514901 PHOX2AO14813 284 aa9.6□□□□□ -0.87
NUP54-216ENST00000514901 UBE2L6O14933 153 aa9.6□□□□□ -0.87
NUP54-216ENST00000514901 SNAPINO95295 136 aa9.6□□□□□ -0.87
NUP54-216ENST00000514901 APOC3P02656 99 aa9.6□□□□□ -0.87
NUP54-216ENST00000514901 SUMO2P61956 95 aaKnown RBP9.6□□□□□ -0.87
NUP54-216ENST00000514901 GAGE6Q13070 117 aa9.6□□□□□ -0.87
NUP54-216ENST00000514901 ATRAIDQ6UW56 229 aa9.6□□□□□ -0.87
NUP54-216ENST00000514901 Q6ZRN7 208 aaPredicted RBP9.6□□□□□ -0.87
NUP54-216ENST00000514901 Q8N3U1 123 aa9.6□□□□□ -0.87
NUP54-216ENST00000514901 TM2D2Q9BX73 214 aa9.6□□□□□ -0.87
NUP54-216ENST00000514901 A0A1B0GUV1 79 aa9.59□□□□□ -0.87
NUP54-216ENST00000514901 H7C423 109 aa9.59□□□□□ -0.87
NUP54-216ENST00000514901 APCSP02743 223 aa9.59□□□□□ -0.87
NUP54-216ENST00000514901 RPL32P62910 135 aaKnown RBP9.59□□□□□ -0.87
NUP54-216ENST00000514901 Q0VG73 95 aa9.59□□□□□ -0.87
NUP54-216ENST00000514901 MPV17L2Q567V2 206 aa9.59□□□□□ -0.87
NUP54-216ENST00000514901 ORMDL3Q8N138 153 aa9.59□□□□□ -0.87
NUP54-216ENST00000514901 RMI2Q96E14 147 aa9.59□□□□□ -0.87
NUP54-216ENST00000514901 KLK12Q9UKR0 248 aa9.59□□□□□ -0.87
NUP54-216ENST00000514901 D6R8Y8 96 aa9.58□□□□□ -0.88
NUP54-216ENST00000514901 TCAPO15273 167 aa9.58□□□□□ -0.88
NUP54-216ENST00000514901 TNFRSF6BO95407 300 aa9.58□□□□□ -0.88
NUP54-216ENST00000514901 RBX1P62877 108 aa9.58□□□□□ -0.88
NUP54-216ENST00000514901 TNP2Q05952 138 aa9.58□□□□□ -0.88
NUP54-216ENST00000514901 COX19Q49B96 90 aa9.58□□□□□ -0.88
NUP54-216ENST00000514901 TMEM136Q6ZRR5 245 aa9.58□□□□□ -0.88
NUP54-216ENST00000514901 KIR2DL4Q99706 377 aa9.58□□□□□ -0.88
NUP54-216ENST00000514901 LAMTOR2Q9Y2Q5 125 aa9.58□□□□□ -0.88
NUP54-216ENST00000514901 COX11Q9Y6N1 276 aa9.58□□□□□ -0.88
NUP54-216ENST00000514901 HECTD4Q9Y4D8 3996 aa9.57□□□□□ -0.88
NUP54-216ENST00000514901 ANGP03950 147 aaKnown RBP9.57□□□□□ -0.88
NUP54-216ENST00000514901 Q9HAA7 133 aa9.57□□□□□ -0.88
NUP54-216ENST00000514901 A0A1B0GVY2 172 aa9.56□□□□□ -0.88
NUP54-216ENST00000514901 EREGO14944 169 aa9.56□□□□□ -0.88
NUP54-216ENST00000514901 PSCAO43653 123 aa9.56□□□□□ -0.88
NUP54-216ENST00000514901 TSHBP01222 138 aa9.56□□□□□ -0.88
NUP54-216ENST00000514901 DEFB104AQ8WTQ1 72 aa9.56□□□□□ -0.88
NUP54-216ENST00000514901 UBE2WQ96B02 151 aa9.56□□□□□ -0.88
NUP54-216ENST00000514901 PRELID3AQ96N28 172 aa9.56□□□□□ -0.88
NUP54-216ENST00000514901 CRPP02741 224 aa9.55□□□□□ -0.88
NUP54-216ENST00000514901 ESDP10768 282 aa9.55□□□□□ -0.88
NUP54-216ENST00000514901 FCER1GP30273 86 aa9.55□□□□□ -0.88
NUP54-216ENST00000514901 Q8N976 141 aa9.55□□□□□ -0.88
NUP54-216ENST00000514901 GNB1LQ9BYB4 327 aa9.55□□□□□ -0.88
NUP54-216ENST00000514901 NPYP01303 97 aa9.54□□□□□ -0.88
NUP54-216ENST00000514901 HLA-DQA1P01909 254 aa9.54□□□□□ -0.88
NUP54-216ENST00000514901 SMAGPQ0VAQ4 97 aa9.54□□□□□ -0.88
NUP54-216ENST00000514901 MIAQ16674 131 aa9.54□□□□□ -0.88
NUP54-216ENST00000514901 AMMECR1LQ6DCA0 310 aa9.54□□□□□ -0.88
NUP54-216ENST00000514901 SLC7A5P1Q8MH63 180 aa9.54□□□□□ -0.88
NUP54-216ENST00000514901 PRR34Q9NV39 138 aa9.54□□□□□ -0.88
NUP54-216ENST00000514901 PKD1P98161 4303 aa9.54□□□□□ -0.88
NUP54-216ENST00000514901 PRSS47A8MTI9 375 aa9.53□□□□□ -0.88
NUP54-216ENST00000514901 ZNF25P17030 456 aaPredicted RBP9.53□□□□□ -0.88
NUP54-216ENST00000514901 ENHOQ6UWT2 76 aa9.53□□□□□ -0.88
NUP54-216ENST00000514901 LINC00269Q8N2A0 174 aa9.53□□□□□ -0.88
NUP54-216ENST00000514901 C20orf203Q8NBC4 194 aa9.53□□□□□ -0.88
NUP54-216ENST00000514901 SMIM2Q9BVW6 85 aa9.53□□□□□ -0.88
NUP54-216ENST00000514901 PKHD1P08F94 4074 aa9.52□□□□□ -0.89
NUP54-216ENST00000514901 IGKV2D-24A0A075B6R9 120 aa9.52□□□□□ -0.89
NUP54-216ENST00000514901 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.52□□□□□ -0.89
NUP54-216ENST00000514901 IGKV2-29A2NJV5 120 aaPredicted RBP9.52□□□□□ -0.89
NUP54-216ENST00000514901 MT-ND6P03923 174 aa9.52□□□□□ -0.89
NUP54-216ENST00000514901 FGF6P10767 208 aa9.52□□□□□ -0.89
NUP54-216ENST00000514901 TMEM18Q96B42 140 aa9.52□□□□□ -0.89
NUP54-216ENST00000514901 TMEM101Q96IK0 257 aa9.52□□□□□ -0.89
NUP54-216ENST00000514901 C1orf43Q9BWL3 253 aa9.52□□□□□ -0.89
NUP54-216ENST00000514901 MAP1LC3AQ9H492 121 aa9.52□□□□□ -0.89
NUP54-216ENST00000514901 DNAH11Q96DT5 4516 aa9.52□□□□□ -0.89
NUP54-216ENST00000514901 IGLV4-60A0A075B6I1 120 aa9.51□□□□□ -0.89
NUP54-216ENST00000514901 A0A087WTM6 91 aa9.51□□□□□ -0.89
NUP54-216ENST00000514901 TRAV8-4A0A0B4J246 113 aa9.51□□□□□ -0.89
NUP54-216ENST00000514901 RNASEKQ6P5S7 137 aaKnown RBP9.51□□□□□ -0.89
NUP54-216ENST00000514901 EPPK1P58107 5090 aaKnown RBP9.51□□□□□ -0.89
NUP54-216ENST00000514901 RAB5AP20339 215 aa9.5□□□□□ -0.89
NUP54-216ENST00000514901 REG3AQ06141 175 aa9.5□□□□□ -0.89
NUP54-216ENST00000514901 MRPL52Q86TS9 123 aaKnown RBP9.5□□□□□ -0.89
NUP54-216ENST00000514901 LRCOL1A6NCL2 159 aa9.49□□□□□ -0.89
NUP54-216ENST00000514901 OR5A1Q8NGJ0 315 aa9.49□□□□□ -0.89
NUP54-216ENST00000514901 PGPEP1Q9NXJ5 209 aa9.49□□□□□ -0.89
NUP54-216ENST00000514901 CSDC2Q9Y534 153 aaKnown RBP9.49□□□□□ -0.89
NUP54-216ENST00000514901 K7EMI3 77 aa9.48□□□□□ -0.89
NUP54-216ENST00000514901 DGAT2L7PQ6IED9 249 aa9.48□□□□□ -0.89
NUP54-216ENST00000514901 SPATA12Q7Z6I5 190 aa9.48□□□□□ -0.89
NUP54-216ENST00000514901 Q8N8P6 123 aa9.48□□□□□ -0.89
NUP54-216ENST00000514901 TGIF2-C20orf24A0A0A6YYL0 155 aa9.47□□□□□ -0.89
NUP54-216ENST00000514901 LOC389332A0A1B0GUA5 103 aa9.47□□□□□ -0.89
NUP54-216ENST00000514901 FABP9Q0Z7S8 132 aa9.47□□□□□ -0.89
NUP54-216ENST00000514901 KIAA1644Q3SXP7 199 aa9.47□□□□□ -0.89
NUP54-216ENST00000514901 CLPSL2Q6UWE3 100 aa9.47□□□□□ -0.89
NUP54-216ENST00000514901 TIMM21Q9BVV7 248 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 356.5 ms