RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 TRIAP1O43715 76 aa9.93□□□□□ -0.82
TCOF1-213ENST00000514442 C9orf66Q5T8R8 295 aa9.93□□□□□ -0.82
TCOF1-213ENST00000514442 HIST2H2BDQ6DRA6 164 aa9.93□□□□□ -0.82
TCOF1-213ENST00000514442 TMEM61Q8N0U2 210 aa9.93□□□□□ -0.82
TCOF1-213ENST00000514442 Q6ZQT7 251 aa9.92□□□□□ -0.82
TCOF1-213ENST00000514442 TINCRA0A1B0GVN0 87 aa9.92□□□□□ -0.82
TCOF1-213ENST00000514442 ZNF561-AS1K7EIQ3 104 aa9.92□□□□□ -0.82
TCOF1-213ENST00000514442 GHRHP01286 108 aa9.92□□□□□ -0.82
TCOF1-213ENST00000514442 C4orf3Q8WVX3 66 aa9.92□□□□□ -0.82
TCOF1-213ENST00000514442 LAMTOR3Q9UHA4 124 aa9.92□□□□□ -0.82
TCOF1-213ENST00000514442 UBE2D1P51668 147 aa9.91□□□□□ -0.82
TCOF1-213ENST00000514442 MED14OSP0DP75 135 aa9.91□□□□□ -0.82
TCOF1-213ENST00000514442 RBM3P98179 157 aaKnown RBP9.91□□□□□ -0.82
TCOF1-213ENST00000514442 A0A0J9YXY3 114 aa9.91□□□□□ -0.82
TCOF1-213ENST00000514442 LY6LH3BQJ8 138 aa9.91□□□□□ -0.82
TCOF1-213ENST00000514442 CEP350Q5VT06 3117 aa9.91□□□□□ -0.82
TCOF1-213ENST00000514442 hADV29S1A0JD25 119 aa9.9□□□□□ -0.82
TCOF1-213ENST00000514442 C10orf99Q6UWK7 81 aa9.9□□□□□ -0.82
TCOF1-213ENST00000514442 Q9H8V8 135 aa9.9□□□□□ -0.82
TCOF1-213ENST00000514442 DEFB4AO15263 64 aa9.9□□□□□ -0.83
TCOF1-213ENST00000514442 TMEM258P61165 79 aa9.9□□□□□ -0.83
TCOF1-213ENST00000514442 TANC2Q9HCD6 1990 aa9.89□□□□□ -0.83
TCOF1-213ENST00000514442 GAS8-AS1O95177 125 aa9.89□□□□□ -0.83
TCOF1-213ENST00000514442 XCL1P47992 114 aa9.89□□□□□ -0.83
TCOF1-213ENST00000514442 NRACQ8N912 160 aa9.89□□□□□ -0.83
TCOF1-213ENST00000514442 PRO0461Q9UI25 63 aa9.89□□□□□ -0.83
TCOF1-213ENST00000514442 COX7CP15954 63 aa9.89□□□□□ -0.83
TCOF1-213ENST00000514442 MIAQ16674 131 aa9.89□□□□□ -0.83
TCOF1-213ENST00000514442 ARHGAP32A7KAX9 2087 aa9.89□□□□□ -0.83
TCOF1-213ENST00000514442 CSDC2Q9Y534 153 aaKnown RBP9.89□□□□□ -0.83
TCOF1-213ENST00000514442 CLPSL1A2RUU4 121 aa9.89□□□□□ -0.83
TCOF1-213ENST00000514442 ABCA2Q9BZC7 2435 aa9.88□□□□□ -0.83
TCOF1-213ENST00000514442 NDUFC2O95298 119 aa9.88□□□□□ -0.83
TCOF1-213ENST00000514442 MDFICQ9P1T7 246 aa9.88□□□□□ -0.83
TCOF1-213ENST00000514442 TNRC6BQ9UPQ9 1833 aaKnown RBP9.88□□□□□ -0.83
TCOF1-213ENST00000514442 TMEM89A2RUT3 159 aa9.88□□□□□ -0.83
TCOF1-213ENST00000514442 IGHV3-30-3P0DP02 117 aa9.88□□□□□ -0.83
TCOF1-213ENST00000514442 TMEM263Q8WUH6 116 aaKnown RBP9.88□□□□□ -0.83
TCOF1-213ENST00000514442 C16orf74Q96GX8 76 aa9.88□□□□□ -0.83
TCOF1-213ENST00000514442 DAND5Q8N907 189 aa9.87□□□□□ -0.83
TCOF1-213ENST00000514442 FAM240AA0A1B0GVK7 77 aa9.87□□□□□ -0.83
TCOF1-213ENST00000514442 FSTL3O95633 263 aa9.87□□□□□ -0.83
TCOF1-213ENST00000514442 GYPEP15421 78 aa9.87□□□□□ -0.83
TCOF1-213ENST00000514442 Q6YL49 198 aa9.87□□□□□ -0.83
TCOF1-213ENST00000514442 IGHV1-58A0A0C4DH39 117 aa9.87□□□□□ -0.83
TCOF1-213ENST00000514442 TMEM223A0PJW6 202 aa9.87□□□□□ -0.83
TCOF1-213ENST00000514442 PPDPFQ9H3Y8 114 aa9.87□□□□□ -0.83
TCOF1-213ENST00000514442 A0A0J9YX75 114 aa9.87□□□□□ -0.83
TCOF1-213ENST00000514442 CRLF1O75462 422 aa9.86□□□□□ -0.83
TCOF1-213ENST00000514442 DEFB135Q30KP9 77 aa9.86□□□□□ -0.83
TCOF1-213ENST00000514442 K7EQD1 137 aa9.86□□□□□ -0.83
TCOF1-213ENST00000514442 Q6ZS46 218 aa9.86□□□□□ -0.83
TCOF1-213ENST00000514442 IGF1P05019 195 aa9.86□□□□□ -0.83
TCOF1-213ENST00000514442 ORMDL1Q9P0S3 153 aa9.86□□□□□ -0.83
TCOF1-213ENST00000514442 COX7A2LO14548 114 aa9.86□□□□□ -0.83
TCOF1-213ENST00000514442 HAMPP81172 84 aa9.86□□□□□ -0.83
TCOF1-213ENST00000514442 OPRPNQ99935 248 aaPredicted RBP9.86□□□□□ -0.83
TCOF1-213ENST00000514442 MYO18BQ8IUG5 2567 aa9.85□□□□□ -0.83
TCOF1-213ENST00000514442 DAZ2Q13117 558 aaKnown RBP9.85□□□□□ -0.83
TCOF1-213ENST00000514442 DAZ4Q86SG3 579 aaKnown RBP9.85□□□□□ -0.83
TCOF1-213ENST00000514442 CNFNQ9BYD5 112 aa9.85□□□□□ -0.83
TCOF1-213ENST00000514442 DAZ3Q9NR90 486 aaKnown RBP9.85□□□□□ -0.83
TCOF1-213ENST00000514442 H7C423 109 aa9.85□□□□□ -0.83
TCOF1-213ENST00000514442 CRIP2P52943 208 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-213ENST00000514442 RNF152Q8N8N0 203 aa9.85□□□□□ -0.83
TCOF1-213ENST00000514442 SMCPP49901 116 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-213ENST00000514442 C5orf38Q86SI9 138 aa9.85□□□□□ -0.83
TCOF1-213ENST00000514442 LINC00526Q96FQ7 95 aa9.85□□□□□ -0.83
TCOF1-213ENST00000514442 HCFC1P51610 2035 aa9.85□□□□□ -0.83
TCOF1-213ENST00000514442 EBI3Q14213 229 aa9.85□□□□□ -0.83
TCOF1-213ENST00000514442 SDIM1Q6ZPB5 146 aa9.85□□□□□ -0.83
TCOF1-213ENST00000514442 MAP6D1Q9H9H5 199 aa9.85□□□□□ -0.83
TCOF1-213ENST00000514442 NAV3Q8IVL0 2385 aa9.84□□□□□ -0.83
TCOF1-213ENST00000514442 IGLV10-54A0A075B6I4 117 aa9.84□□□□□ -0.83
TCOF1-213ENST00000514442 H0YGX0 51 aa9.84□□□□□ -0.83
TCOF1-213ENST00000514442 Q9HAA7 133 aa9.84□□□□□ -0.83
TCOF1-213ENST00000514442 FAM19A5Q7Z5A7 132 aaPredicted RBP9.84□□□□□ -0.83
TCOF1-213ENST00000514442 ANKRD11Q6UB99 2663 aaPredicted RBP9.84□□□□□ -0.83
TCOF1-213ENST00000514442 INAFM1C9JVW0 142 aa9.84□□□□□ -0.83
TCOF1-213ENST00000514442 C20orf173Q96LM9 149 aa9.84□□□□□ -0.83
TCOF1-213ENST00000514442 PSMB8P28062 276 aa9.83□□□□□ -0.84
TCOF1-213ENST00000514442 LST1O00453 97 aa9.83□□□□□ -0.84
TCOF1-213ENST00000514442 CXCL5P42830 114 aa9.83□□□□□ -0.84
TCOF1-213ENST00000514442 IGKV2D-24A0A075B6R9 120 aa9.83□□□□□ -0.84
TCOF1-213ENST00000514442 C20orf203Q8NBC4 194 aa9.83□□□□□ -0.84
TCOF1-213ENST00000514442 ZNF22P17026 224 aaPredicted RBP9.82□□□□□ -0.84
TCOF1-213ENST00000514442 TRAV25A0A0B4J276 109 aa9.82□□□□□ -0.84
TCOF1-213ENST00000514442 SERP2Q8N6R1 65 aa9.82□□□□□ -0.84
TCOF1-213ENST00000514442 SPART-AS1P0CW21 52 aa9.82□□□□□ -0.84
TCOF1-213ENST00000514442 ZFAND3Q9H8U3 227 aa9.82□□□□□ -0.84
TCOF1-213ENST00000514442 FAM236DA0A1B0GTK5 79 aa9.81□□□□□ -0.84
TCOF1-213ENST00000514442 FAM236CP0DP71 79 aa9.81□□□□□ -0.84
TCOF1-213ENST00000514442 RPL18AQ02543 176 aaKnown RBP9.81□□□□□ -0.84
TCOF1-213ENST00000514442 PRRC2AP48634 2157 aaKnown RBP9.8□□□□□ -0.84
TCOF1-213ENST00000514442 Q6ZSV7 163 aa9.8□□□□□ -0.84
TCOF1-213ENST00000514442 C14orf132Q9NPU4 83 aa9.8□□□□□ -0.84
TCOF1-213ENST00000514442 SMAD5-AS1Q9Y6J3 95 aa9.8□□□□□ -0.84
TCOF1-213ENST00000514442 NKAPP1Q8N9T2 125 aa9.8□□□□□ -0.84
TCOF1-213ENST00000514442 LOC107984640A0A0U1RRK4 108 aa9.79□□□□□ -0.84
TCOF1-213ENST00000514442 BRK1Q8WUW1 75 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms