RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 PSCAO43653 123 aa6.39□□□□□ -1.39
RNF4-221ENST00000513643 POLR2KP53803 58 aaKnown RBP6.39□□□□□ -1.39
RNF4-221ENST00000513643 CLLU1Q5K131 121 aa6.39□□□□□ -1.39
RNF4-221ENST00000513643 C20orf203Q8NBC4 194 aa6.39□□□□□ -1.39
RNF4-221ENST00000513643 UBE2WQ96B02 151 aa6.39□□□□□ -1.39
RNF4-221ENST00000513643 RPL39LQ96EH5 51 aaKnown RBP6.39□□□□□ -1.39
RNF4-221ENST00000513643 CHCHD5Q9BSY4 110 aa6.39□□□□□ -1.39
RNF4-221ENST00000513643 KRTAP4-5Q9BYR2 181 aa6.39□□□□□ -1.39
RNF4-221ENST00000513643 NCR2O95944 276 aa6.38□□□□□ -1.39
RNF4-221ENST00000513643 GCSHP23434 173 aa6.38□□□□□ -1.39
RNF4-221ENST00000513643 GAGE6Q13070 117 aa6.38□□□□□ -1.39
RNF4-221ENST00000513643 ADIRFQ15847 76 aa6.38□□□□□ -1.39
RNF4-221ENST00000513643 KCNIP4Q6PIL6 250 aa6.38□□□□□ -1.39
RNF4-221ENST00000513643 SMIM15Q7Z3B0 74 aa6.38□□□□□ -1.39
RNF4-221ENST00000513643 RMI2Q96E14 147 aa6.38□□□□□ -1.39
RNF4-221ENST00000513643 TMEM243Q9BU79 118 aa6.38□□□□□ -1.39
RNF4-221ENST00000513643 NAT8BQ9UHF3 227 aa6.38□□□□□ -1.39
RNF4-221ENST00000513643 IGLV4-60A0A075B6I1 120 aa6.37□□□□□ -1.39
RNF4-221ENST00000513643 TRBV27A0A0K0K1C4 114 aa6.37□□□□□ -1.39
RNF4-221ENST00000513643 A0A1B0GXF2 115 aa6.37□□□□□ -1.39
RNF4-221ENST00000513643 SDHAF1A6NFY7 115 aa6.37□□□□□ -1.39
RNF4-221ENST00000513643 ANGP03950 147 aaKnown RBP6.37□□□□□ -1.39
RNF4-221ENST00000513643 ESDP10768 282 aa6.37□□□□□ -1.39
RNF4-221ENST00000513643 RPS10P46783 165 aaKnown RBP6.37□□□□□ -1.39
RNF4-221ENST00000513643 RIGQ13278 110 aa6.37□□□□□ -1.39
RNF4-221ENST00000513643 MIAQ16674 131 aa6.37□□□□□ -1.39
RNF4-221ENST00000513643 AMN1Q8IY45 258 aa6.37□□□□□ -1.39
RNF4-221ENST00000513643 LINC00269Q8N2A0 174 aa6.37□□□□□ -1.39
RNF4-221ENST00000513643 BAALCQ8WXS3 180 aa6.37□□□□□ -1.39
RNF4-221ENST00000513643 MRAP2Q96G30 205 aa6.37□□□□□ -1.39
RNF4-221ENST00000513643 IGKV2D-24A0A075B6R9 120 aa6.36□□□□□ -1.39
RNF4-221ENST00000513643 IGLV5-52A0A0A0MRZ9 124 aa6.36□□□□□ -1.39
RNF4-221ENST00000513643 A0A1B0GW15 77 aa6.36□□□□□ -1.39
RNF4-221ENST00000513643 H7C423 109 aa6.36□□□□□ -1.39
RNF4-221ENST00000513643 COTL1Q14019 142 aa6.36□□□□□ -1.39
RNF4-221ENST00000513643 FAM104BQ5XKR9 115 aa6.36□□□□□ -1.39
RNF4-221ENST00000513643 Q6ZSA8 131 aa6.36□□□□□ -1.39
RNF4-221ENST00000513643 Q8N1X5 172 aa6.36□□□□□ -1.39
RNF4-221ENST00000513643 NRACQ8N912 160 aa6.36□□□□□ -1.39
RNF4-221ENST00000513643 BORCS7Q96B45 105 aa6.36□□□□□ -1.39
RNF4-221ENST00000513643 TMEM70Q9BUB7 260 aa6.36□□□□□ -1.39
RNF4-221ENST00000513643 SRRM2Q9UQ35 2752 aaKnown RBP6.36□□□□□ -1.39
RNF4-221ENST00000513643 TRBV24-1A0A075B6N3 115 aa6.35□□□□□ -1.39
RNF4-221ENST00000513643 I3L3M4 83 aa6.35□□□□□ -1.39
RNF4-221ENST00000513643 TSHBP01222 138 aa6.35□□□□□ -1.39
RNF4-221ENST00000513643 RAB14P61106 215 aa6.35□□□□□ -1.39
RNF4-221ENST00000513643 DEFB104AQ8WTQ1 72 aa6.35□□□□□ -1.39
RNF4-221ENST00000513643 TRAV8-4A0A0B4J246 113 aa6.34□□□□□ -1.39
RNF4-221ENST00000513643 LINC00862A6NCI5 91 aa6.34□□□□□ -1.39
RNF4-221ENST00000513643 LECT2O14960 151 aa6.34□□□□□ -1.39
RNF4-221ENST00000513643 AMTP48728 403 aa6.34□□□□□ -1.39
RNF4-221ENST00000513643 RPL32P62910 135 aaKnown RBP6.34□□□□□ -1.39
RNF4-221ENST00000513643 REG3AQ06141 175 aa6.34□□□□□ -1.39
RNF4-221ENST00000513643 PNRC1Q12796 327 aaPredicted RBP6.34□□□□□ -1.39
RNF4-221ENST00000513643 C1orf43Q9BWL3 253 aa6.34□□□□□ -1.39
RNF4-221ENST00000513643 ST20Q9HBF5 79 aa6.34□□□□□ -1.39
RNF4-221ENST00000513643 FAM30AQ9NZY2 134 aa6.34□□□□□ -1.39
RNF4-221ENST00000513643 PPP1R2P9O14990 202 aa6.33□□□□□ -1.4
RNF4-221ENST00000513643 PPP1R17O96001 155 aa6.33□□□□□ -1.4
RNF4-221ENST00000513643 CRPP02741 224 aa6.33□□□□□ -1.4
RNF4-221ENST00000513643 MRPL51Q4U2R6 128 aaKnown RBP6.33□□□□□ -1.4
RNF4-221ENST00000513643 UQCC3Q6UW78 93 aa6.33□□□□□ -1.4
RNF4-221ENST00000513643 MRPL52Q86TS9 123 aaKnown RBP6.33□□□□□ -1.4
RNF4-221ENST00000513643 MYCBP2O75592 4640 aa6.33□□□□□ -1.4
RNF4-221ENST00000513643 SMKR1H3BMG3 65 aa6.32□□□□□ -1.4
RNF4-221ENST00000513643 VCYO14598 125 aa6.32□□□□□ -1.4
RNF4-221ENST00000513643 ADCYAP1P18509 176 aa6.32□□□□□ -1.4
RNF4-221ENST00000513643 PMCHP20382 165 aa6.32□□□□□ -1.4
RNF4-221ENST00000513643 SUMO2P61956 95 aaKnown RBP6.32□□□□□ -1.4
RNF4-221ENST00000513643 HBBP68871 147 aa6.32□□□□□ -1.4
RNF4-221ENST00000513643 ATP5L2Q7Z4Y8 100 aa6.32□□□□□ -1.4
RNF4-221ENST00000513643 C20orf78Q9BR46 151 aa6.32□□□□□ -1.4
RNF4-221ENST00000513643 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.31□□□□□ -1.4
RNF4-221ENST00000513643 IGKV2-29A2NJV5 120 aaPredicted RBP6.31□□□□□ -1.4
RNF4-221ENST00000513643 TMEM218A2RU14 115 aa6.31□□□□□ -1.4
RNF4-221ENST00000513643 USP17L23D6RBM5 183 aa6.31□□□□□ -1.4
RNF4-221ENST00000513643 APCSP02743 223 aa6.31□□□□□ -1.4
RNF4-221ENST00000513643 PRSS1P07477 247 aa6.31□□□□□ -1.4
RNF4-221ENST00000513643 FGF6P10767 208 aa6.31□□□□□ -1.4
RNF4-221ENST00000513643 ZNF25P17030 456 aaPredicted RBP6.31□□□□□ -1.4
RNF4-221ENST00000513643 CAMPP49913 170 aa6.31□□□□□ -1.4
RNF4-221ENST00000513643 CLPSL2Q6UWE3 100 aa6.31□□□□□ -1.4
RNF4-221ENST00000513643 ANAPC16Q96DE5 110 aa6.31□□□□□ -1.4
RNF4-221ENST00000513643 CSDC2Q9Y534 153 aaKnown RBP6.31□□□□□ -1.4
RNF4-221ENST00000513643 PRSS47A8MTI9 375 aa6.3□□□□□ -1.4
RNF4-221ENST00000513643 PHOX2AO14813 284 aa6.3□□□□□ -1.4
RNF4-221ENST00000513643 UBE2L6O14933 153 aa6.3□□□□□ -1.4
RNF4-221ENST00000513643 MT-ND4LP03901 98 aa6.3□□□□□ -1.4
RNF4-221ENST00000513643 S100A8P05109 93 aa6.3□□□□□ -1.4
RNF4-221ENST00000513643 C14orf177Q52M58 125 aa6.3□□□□□ -1.4
RNF4-221ENST00000513643 DGAT2L7PQ6IED9 249 aa6.3□□□□□ -1.4
RNF4-221ENST00000513643 MRPL54Q6P161 138 aaKnown RBP6.3□□□□□ -1.4
RNF4-221ENST00000513643 CDC42SE2Q9NRR3 84 aa6.3□□□□□ -1.4
RNF4-221ENST00000513643 TMEM242Q9NWH2 141 aa6.3□□□□□ -1.4
RNF4-221ENST00000513643 HERC1Q15751 4861 aa6.29□□□□□ -1.4
RNF4-221ENST00000513643 IGLV10-54A0A075B6I4 117 aa6.29□□□□□ -1.4
RNF4-221ENST00000513643 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.29□□□□□ -1.4
RNF4-221ENST00000513643 F8W036 122 aa6.29□□□□□ -1.4
RNF4-221ENST00000513643 TNFRSF6BO95407 300 aa6.29□□□□□ -1.4
RNF4-221ENST00000513643 PPBPP02775 128 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms