RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 BDP1A6H8Y1 2624 aa4.41□□□□□ -1.7
USP38-203ENST00000511739 TRBV6-1A0A0K0K1D8 114 aa4.4□□□□□ -1.7
USP38-203ENST00000511739 TEX49A0A1B0GTD5 131 aa4.4□□□□□ -1.7
USP38-203ENST00000511739 HRCT1Q6UXD1 115 aa4.4□□□□□ -1.7
USP38-203ENST00000511739 PRORYQ9H606 182 aa4.4□□□□□ -1.7
USP38-203ENST00000511739 EML6Q6ZMW3 1958 aa4.4□□□□□ -1.7
USP38-203ENST00000511739 SPRNQ5BIV9 151 aa4.4□□□□□ -1.7
USP38-203ENST00000511739 ZNF747Q9BV97 191 aa4.4□□□□□ -1.7
USP38-203ENST00000511739 PPDPFQ9H3Y8 114 aa4.4□□□□□ -1.7
USP38-203ENST00000511739 CCDC168Q8NDH2 2452 aa4.4□□□□□ -1.7
USP38-203ENST00000511739 CACNA1AO00555 2505 aa4.4□□□□□ -1.7
USP38-203ENST00000511739 A0A0J9YX75 114 aa4.4□□□□□ -1.71
USP38-203ENST00000511739 SYCNQ0VAF6 134 aa4.4□□□□□ -1.71
USP38-203ENST00000511739 C11orf53Q8IXP5 236 aa4.4□□□□□ -1.71
USP38-203ENST00000511739 ZFHX2Q9C0A1 2572 aaPredicted RBP4.4□□□□□ -1.71
USP38-203ENST00000511739 COL5A1P20908 1838 aaPredicted RBP4.4□□□□□ -1.71
USP38-203ENST00000511739 FAM236DA0A1B0GTK5 79 aa4.4□□□□□ -1.71
USP38-203ENST00000511739 FAM236CP0DP71 79 aa4.4□□□□□ -1.71
USP38-203ENST00000511739 ZNF726P1Q15940 193 aa4.4□□□□□ -1.71
USP38-203ENST00000511739 Q6ZTI0 123 aa4.4□□□□□ -1.71
USP38-203ENST00000511739 WFDC10BQ8IUB3 73 aa4.4□□□□□ -1.71
USP38-203ENST00000511739 RITA1Q96K30 269 aa4.4□□□□□ -1.71
USP38-203ENST00000511739 SPG11Q96JI7 2443 aa4.39□□□□□ -1.71
USP38-203ENST00000511739 LGALS9O00182 355 aa4.39□□□□□ -1.71
USP38-203ENST00000511739 DEFB1P60022 68 aa4.39□□□□□ -1.71
USP38-203ENST00000511739 FOXI1Q12951 378 aa4.39□□□□□ -1.71
USP38-203ENST00000511739 ZFAND2AQ8N6M9 145 aa4.39□□□□□ -1.71
USP38-203ENST00000511739 MSRB1Q9NZV6 116 aa4.39□□□□□ -1.71
USP38-203ENST00000511739 MDFICQ9P1T7 246 aa4.39□□□□□ -1.71
USP38-203ENST00000511739 LY6LH3BQJ8 138 aa4.39□□□□□ -1.71
USP38-203ENST00000511739 TAX1BP3O14907 124 aa4.39□□□□□ -1.71
USP38-203ENST00000511739 FREM1Q5H8C1 2179 aa4.39□□□□□ -1.71
USP38-203ENST00000511739 PRAC2D3DTV9 90 aa4.39□□□□□ -1.71
USP38-203ENST00000511739 Q6YL49 198 aa4.39□□□□□ -1.71
USP38-203ENST00000511739 RETNQ9HD89 108 aa4.39□□□□□ -1.71
USP38-203ENST00000511739 WI2-2373I1.2A0A1W2PRP0 233 aa4.39□□□□□ -1.71
USP38-203ENST00000511739 ZNF843Q8N446 348 aa4.39□□□□□ -1.71
USP38-203ENST00000511739 A0A1W2PNU3 283 aaPredicted RBP4.39□□□□□ -1.71
USP38-203ENST00000511739 TCL1BO95988 128 aa4.39□□□□□ -1.71
USP38-203ENST00000511739 Q8N7P7 452 aa4.39□□□□□ -1.71
USP38-203ENST00000511739 CSPG4Q6UVK1 2322 aa4.38□□□□□ -1.71
USP38-203ENST00000511739 MYO18BQ8IUG5 2567 aa4.38□□□□□ -1.71
USP38-203ENST00000511739 PRYO14603 147 aa4.38□□□□□ -1.71
USP38-203ENST00000511739 UNQ9165/PRO28630Q6UXU0 137 aa4.38□□□□□ -1.71
USP38-203ENST00000511739 A0A0J9YWU9 116 aa4.38□□□□□ -1.71
USP38-203ENST00000511739 Q6ZUT4 128 aa4.38□□□□□ -1.71
USP38-203ENST00000511739 SPATA12Q7Z6I5 190 aa4.38□□□□□ -1.71
USP38-203ENST00000511739 IGLV9-49A0A0B4J1Y8 123 aa4.37□□□□□ -1.71
USP38-203ENST00000511739 FAM236AA0A1B0GUQ0 79 aa4.37□□□□□ -1.71
USP38-203ENST00000511739 FAM236BA0A1B0GV22 79 aa4.37□□□□□ -1.71
USP38-203ENST00000511739 DEFB114Q30KQ6 69 aa4.37□□□□□ -1.71
USP38-203ENST00000511739 FBXL19-AS1Q494R0 122 aa4.37□□□□□ -1.71
USP38-203ENST00000511739 XAGE1AQ9HD64 81 aa4.37□□□□□ -1.71
USP38-203ENST00000511739 LINC00474Q9P2X8 69 aa4.37□□□□□ -1.71
USP38-203ENST00000511739 CRYGBP07316 175 aa4.37□□□□□ -1.71
USP38-203ENST00000511739 CLEC2BQ92478 149 aa4.37□□□□□ -1.71
USP38-203ENST00000511739 K7EN84 100 aa4.37□□□□□ -1.71
USP38-203ENST00000511739 MIAQ16674 131 aa4.37□□□□□ -1.71
USP38-203ENST00000511739 Q6ZSV7 163 aa4.37□□□□□ -1.71
USP38-203ENST00000511739 Q6ZVQ6 151 aa4.37□□□□□ -1.71
USP38-203ENST00000511739 C20orf203Q8NBC4 194 aa4.37□□□□□ -1.71
USP38-203ENST00000511739 TOMM6Q96B49 74 aa4.37□□□□□ -1.71
USP38-203ENST00000511739 C11orf86A6NJI1 115 aa4.36□□□□□ -1.71
USP38-203ENST00000511739 C19orf84I3L1E1 186 aa4.36□□□□□ -1.71
USP38-203ENST00000511739 KPRPQ5T749 579 aaPredicted RBP4.36□□□□□ -1.71
USP38-203ENST00000511739 C1orf158Q8N1D5 194 aa4.36□□□□□ -1.71
USP38-203ENST00000511739 CEMP1Q6PRD7 247 aaPredicted RBP4.36□□□□□ -1.71
USP38-203ENST00000511739 Q8N9L7 120 aa4.36□□□□□ -1.71
USP38-203ENST00000511739 PLAC8L1A1L4L8 177 aa4.36□□□□□ -1.71
USP38-203ENST00000511739 IGKV2-28A0A075B6P5 120 aa4.36□□□□□ -1.71
USP38-203ENST00000511739 B5MCH6 92 aa4.36□□□□□ -1.71
USP38-203ENST00000511739 IGKV2D-28P01615 120 aa4.36□□□□□ -1.71
USP38-203ENST00000511739 LOC107984640A0A0U1RRK4 108 aa4.36□□□□□ -1.71
USP38-203ENST00000511739 CRIP3Q6Q6R5 217 aa4.35□□□□□ -1.71
USP38-203ENST00000511739 Q8N976 141 aa4.35□□□□□ -1.71
USP38-203ENST00000511739 C11orf1Q9H5F2 150 aa4.35□□□□□ -1.71
USP38-203ENST00000511739 IGLV1-47P01700 117 aa4.35□□□□□ -1.71
USP38-203ENST00000511739 IGHV4-30-4P0DP06 118 aa4.35□□□□□ -1.71
USP38-203ENST00000511739 TRAV23DV6A0A075B6W5 121 aa4.35□□□□□ -1.71
USP38-203ENST00000511739 H7C423 109 aa4.35□□□□□ -1.71
USP38-203ENST00000511739 LMO4P61968 165 aa4.35□□□□□ -1.71
USP38-203ENST00000511739 SCXQ7RTU7 201 aa4.35□□□□□ -1.71
USP38-203ENST00000511739 COL4A2P08572 1712 aa4.35□□□□□ -1.71
USP38-203ENST00000511739 MED12LQ86YW9 2145 aa4.35□□□□□ -1.71
USP38-203ENST00000511739 E9PLD3 99 aa4.35□□□□□ -1.71
USP38-203ENST00000511739 BRK1Q8WUW1 75 aa4.35□□□□□ -1.71
USP38-203ENST00000511739 X6R8D5 127 aa4.35□□□□□ -1.71
USP38-203ENST00000511739 LINC00574Q9H8X3 128 aa4.34□□□□□ -1.71
USP38-203ENST00000511739 NCKAP5O14513 1909 aa4.34□□□□□ -1.71
USP38-203ENST00000511739 IGLV4-69A0A075B6H9 119 aa4.34□□□□□ -1.71
USP38-203ENST00000511739 HIST2H2BDQ6DRA6 164 aa4.34□□□□□ -1.71
USP38-203ENST00000511739 PATE2Q6UY27 113 aa4.34□□□□□ -1.71
USP38-203ENST00000511739 TEN1Q86WV5 123 aa4.34□□□□□ -1.71
USP38-203ENST00000511739 Q8NA96 180 aa4.34□□□□□ -1.71
USP38-203ENST00000511739 IGLV5-52A0A0A0MRZ9 124 aa4.34□□□□□ -1.71
USP38-203ENST00000511739 H3BT86 120 aa4.34□□□□□ -1.71
USP38-203ENST00000511739 FSTL3O95633 263 aa4.34□□□□□ -1.71
USP38-203ENST00000511739 BBC3Q96PG8 261 aaPredicted RBP4.34□□□□□ -1.71
USP38-203ENST00000511739 TRBV6-8A0A0A6YYG3 113 aa4.34□□□□□ -1.71
USP38-203ENST00000511739 SERP2Q8N6R1 65 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms