RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 V9GYV3 84 aa7.65□□□□□ -1.18
SH3RF1-205ENST00000511421 FAT1Q14517 4588 aa7.65□□□□□ -1.18
SH3RF1-205ENST00000511421 HIGD1CA8MV81 97 aa7.64□□□□□ -1.19
SH3RF1-205ENST00000511421 RPL23P62829 140 aaKnown RBP7.64□□□□□ -1.19
SH3RF1-205ENST00000511421 SMIM15Q7Z3B0 74 aa7.64□□□□□ -1.19
SH3RF1-205ENST00000511421 DEFB104AQ8WTQ1 72 aa7.64□□□□□ -1.19
SH3RF1-205ENST00000511421 ISOC2Q96AB3 205 aa7.64□□□□□ -1.19
SH3RF1-205ENST00000511421 PRR34Q9NV39 138 aa7.64□□□□□ -1.19
SH3RF1-205ENST00000511421 A0A1B0GUT8 65 aa7.63□□□□□ -1.19
SH3RF1-205ENST00000511421 LOC105371267A0A1B0GV96 52 aa7.63□□□□□ -1.19
SH3RF1-205ENST00000511421 CRPP02741 224 aa7.63□□□□□ -1.19
SH3RF1-205ENST00000511421 PEA15Q15121 130 aa7.63□□□□□ -1.19
SH3RF1-205ENST00000511421 RPL39LQ96EH5 51 aaKnown RBP7.63□□□□□ -1.19
SH3RF1-205ENST00000511421 TMEM243Q9BU79 118 aa7.63□□□□□ -1.19
SH3RF1-205ENST00000511421 C1orf43Q9BWL3 253 aa7.63□□□□□ -1.19
SH3RF1-205ENST00000511421 SMDT1Q9H4I9 107 aa7.63□□□□□ -1.19
SH3RF1-205ENST00000511421 COTL1Q14019 142 aa7.63□□□□□ -1.19
SH3RF1-205ENST00000511421 MIAQ16674 131 aa7.63□□□□□ -1.19
SH3RF1-205ENST00000511421 LINC00269Q8N2A0 174 aa7.63□□□□□ -1.19
SH3RF1-205ENST00000511421 C20orf203Q8NBC4 194 aa7.63□□□□□ -1.19
SH3RF1-205ENST00000511421 NAT8Q9UHE5 227 aa7.63□□□□□ -1.19
SH3RF1-205ENST00000511421 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.62□□□□□ -1.19
SH3RF1-205ENST00000511421 A0A1B0GUV1 79 aa7.62□□□□□ -1.19
SH3RF1-205ENST00000511421 GAS8-AS1O95177 125 aa7.62□□□□□ -1.19
SH3RF1-205ENST00000511421 KRTAP26-1Q6PEX3 210 aa7.62□□□□□ -1.19
SH3RF1-205ENST00000511421 NUP35Q8NFH5 326 aa7.62□□□□□ -1.19
SH3RF1-205ENST00000511421 BORCS7Q96B45 105 aa7.62□□□□□ -1.19
SH3RF1-205ENST00000511421 TMEM70Q9BUB7 260 aa7.62□□□□□ -1.19
SH3RF1-205ENST00000511421 TMEM191AQ9H0A3 160 aa7.62□□□□□ -1.19
SH3RF1-205ENST00000511421 IGLV4-60A0A075B6I1 120 aa7.61□□□□□ -1.19
SH3RF1-205ENST00000511421 AMTP48728 403 aa7.61□□□□□ -1.19
SH3RF1-205ENST00000511421 ADIRFQ15847 76 aa7.61□□□□□ -1.19
SH3RF1-205ENST00000511421 CLPSL2Q6UWE3 100 aa7.61□□□□□ -1.19
SH3RF1-205ENST00000511421 RNF185Q96GF1 192 aa7.61□□□□□ -1.19
SH3RF1-205ENST00000511421 FAM30AQ9NZY2 134 aa7.61□□□□□ -1.19
SH3RF1-205ENST00000511421 TRBV6-5A0A0K0K1A5 114 aa7.6□□□□□ -1.19
SH3RF1-205ENST00000511421 SDHAF1A6NFY7 115 aa7.6□□□□□ -1.19
SH3RF1-205ENST00000511421 RAB4AP20338 218 aa7.6□□□□□ -1.19
SH3RF1-205ENST00000511421 HAMPP81172 84 aa7.6□□□□□ -1.19
SH3RF1-205ENST00000511421 REG3AQ06141 175 aa7.6□□□□□ -1.19
SH3RF1-205ENST00000511421 SMIM27A0A1W2PRY6 76 aa7.59□□□□□ -1.19
SH3RF1-205ENST00000511421 UBE2L6O14933 153 aa7.59□□□□□ -1.19
SH3RF1-205ENST00000511421 NCR2O95944 276 aa7.59□□□□□ -1.19
SH3RF1-205ENST00000511421 RIGQ13278 110 aa7.59□□□□□ -1.19
SH3RF1-205ENST00000511421 Q6ZSA8 131 aa7.59□□□□□ -1.19
SH3RF1-205ENST00000511421 AMN1Q8IY45 258 aa7.59□□□□□ -1.19
SH3RF1-205ENST00000511421 NAT8BQ9UHF3 227 aa7.59□□□□□ -1.19
SH3RF1-205ENST00000511421 RPS10P46783 165 aaKnown RBP7.58□□□□□ -1.2
SH3RF1-205ENST00000511421 LINC01620Q4KN68 170 aa7.58□□□□□ -1.2
SH3RF1-205ENST00000511421 EPM2AB3EWF7 344 aa7.57□□□□□ -1.2
SH3RF1-205ENST00000511421 USP17L23D6RBM5 183 aa7.57□□□□□ -1.2
SH3RF1-205ENST00000511421 I3L3M4 83 aa7.57□□□□□ -1.2
SH3RF1-205ENST00000511421 HLA-DQA1P01909 254 aa7.57□□□□□ -1.2
SH3RF1-205ENST00000511421 POLR2KP53803 58 aaKnown RBP7.57□□□□□ -1.2
SH3RF1-205ENST00000511421 C14orf177Q52M58 125 aa7.57□□□□□ -1.2
SH3RF1-205ENST00000511421 MRAP2Q96G30 205 aa7.57□□□□□ -1.2
SH3RF1-205ENST00000511421 VPS13BQ7Z7G8 4022 aa7.57□□□□□ -1.2
SH3RF1-205ENST00000511421 IGLV10-54A0A075B6I4 117 aa7.57□□□□□ -1.2
SH3RF1-205ENST00000511421 TRAV8-4A0A0B4J246 113 aa7.57□□□□□ -1.2
SH3RF1-205ENST00000511421 H7C423 109 aa7.57□□□□□ -1.2
SH3RF1-205ENST00000511421 APCSP02743 223 aa7.57□□□□□ -1.2
SH3RF1-205ENST00000511421 SMR3BP02814 79 aaPredicted RBP7.57□□□□□ -1.2
SH3RF1-205ENST00000511421 PMCHP20382 165 aa7.57□□□□□ -1.2
SH3RF1-205ENST00000511421 ST20Q9HBF5 79 aa7.57□□□□□ -1.2
SH3RF1-205ENST00000511421 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.56□□□□□ -1.2
SH3RF1-205ENST00000511421 IGKV2-29A2NJV5 120 aaPredicted RBP7.56□□□□□ -1.2
SH3RF1-205ENST00000511421 TSHBP01222 138 aa7.56□□□□□ -1.2
SH3RF1-205ENST00000511421 PRSS1P07477 247 aa7.56□□□□□ -1.2
SH3RF1-205ENST00000511421 TRBV27A0A0K0K1C4 114 aa7.55□□□□□ -1.2
SH3RF1-205ENST00000511421 SMKR1H3BMG3 65 aa7.55□□□□□ -1.2
SH3RF1-205ENST00000511421 ESDP10768 282 aa7.55□□□□□ -1.2
SH3RF1-205ENST00000511421 Q5VSD8 79 aa7.55□□□□□ -1.2
SH3RF1-205ENST00000511421 FAM104BQ5XKR9 115 aa7.55□□□□□ -1.2
SH3RF1-205ENST00000511421 NRACQ8N912 160 aa7.55□□□□□ -1.2
SH3RF1-205ENST00000511421 TMEM242Q9NWH2 141 aa7.55□□□□□ -1.2
SH3RF1-205ENST00000511421 FGF6P10767 208 aa7.54□□□□□ -1.2
SH3RF1-205ENST00000511421 MRPL51Q4U2R6 128 aaKnown RBP7.54□□□□□ -1.2
SH3RF1-205ENST00000511421 ANKRD39Q53RE8 183 aa7.54□□□□□ -1.2
SH3RF1-205ENST00000511421 AMMECR1LQ6DCA0 310 aa7.54□□□□□ -1.2
SH3RF1-205ENST00000511421 A0A1B0GW15 77 aa7.54□□□□□ -1.2
SH3RF1-205ENST00000511421 CAMPP49913 170 aa7.54□□□□□ -1.2
SH3RF1-205ENST00000511421 RAB14P61106 215 aa7.54□□□□□ -1.2
SH3RF1-205ENST00000511421 RNASEKQ6P5S7 137 aaKnown RBP7.54□□□□□ -1.2
SH3RF1-205ENST00000511421 A0A1B0GXF2 115 aa7.53□□□□□ -1.2
SH3RF1-205ENST00000511421 VCYO14598 125 aa7.52□□□□□ -1.21
SH3RF1-205ENST00000511421 PPP1R17O96001 155 aa7.52□□□□□ -1.21
SH3RF1-205ENST00000511421 ZNF25P17030 456 aaPredicted RBP7.52□□□□□ -1.21
SH3RF1-205ENST00000511421 SUMO2P61956 95 aaKnown RBP7.52□□□□□ -1.21
SH3RF1-205ENST00000511421 CLLU1Q5K131 121 aa7.52□□□□□ -1.21
SH3RF1-205ENST00000511421 DGAT2L7PQ6IED9 249 aa7.52□□□□□ -1.21
SH3RF1-205ENST00000511421 MRPL54Q6P161 138 aaKnown RBP7.52□□□□□ -1.21
SH3RF1-205ENST00000511421 CLRN3Q8NCR9 226 aa7.52□□□□□ -1.21
SH3RF1-205ENST00000511421 IGKV3OR2-268A0A0C4DH90 116 aa7.51□□□□□ -1.21
SH3RF1-205ENST00000511421 LINC00862A6NCI5 91 aa7.51□□□□□ -1.21
SH3RF1-205ENST00000511421 HBBP68871 147 aa7.51□□□□□ -1.21
SH3RF1-205ENST00000511421 TRBV24-1A0A075B6N3 115 aa7.51□□□□□ -1.21
SH3RF1-205ENST00000511421 GAGE12HA6NDE8 117 aa7.51□□□□□ -1.21
SH3RF1-205ENST00000511421 FAM229AH3BQW9 127 aa7.51□□□□□ -1.21
SH3RF1-205ENST00000511421 IFITM2Q01629 132 aa7.51□□□□□ -1.21
SH3RF1-205ENST00000511421 SCXQ7RTU7 201 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms