RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 TMEM243Q9BU79 118 aa11.53□□□□□ -0.56
CLDND1-221ENST00000510541 TRAV26-2A0A0B4J265 109 aa11.52□□□□□ -0.57
CLDND1-221ENST00000510541 I3L3M4 83 aa11.52□□□□□ -0.57
CLDND1-221ENST00000510541 ADCYAP1P18509 176 aa11.52□□□□□ -0.57
CLDND1-221ENST00000510541 AMN1Q8IY45 258 aa11.52□□□□□ -0.57
CLDND1-221ENST00000510541 TMEM70Q9BUB7 260 aa11.52□□□□□ -0.57
CLDND1-221ENST00000510541 TRAV9-1A0A075B6T8 112 aa11.51□□□□□ -0.57
CLDND1-221ENST00000510541 MIAQ16674 131 aa11.51□□□□□ -0.57
CLDND1-221ENST00000510541 MPV17L2Q567V2 206 aa11.51□□□□□ -0.57
CLDND1-221ENST00000510541 Q8N3U1 123 aa11.51□□□□□ -0.57
CLDND1-221ENST00000510541 RPL39LQ96EH5 51 aaKnown RBP11.51□□□□□ -0.57
CLDND1-221ENST00000510541 C20orf78Q9BR46 151 aa11.51□□□□□ -0.57
CLDND1-221ENST00000510541 ST20Q9HBF5 79 aa11.51□□□□□ -0.57
CLDND1-221ENST00000510541 TMEM262E9PQX1 116 aa11.5□□□□□ -0.57
CLDND1-221ENST00000510541 TCAPO15273 167 aa11.5□□□□□ -0.57
CLDND1-221ENST00000510541 RBX1P62877 108 aa11.5□□□□□ -0.57
CLDND1-221ENST00000510541 NRACQ8N912 160 aa11.5□□□□□ -0.57
CLDND1-221ENST00000510541 NTN5Q8WTR8 489 aaPredicted RBP11.5□□□□□ -0.57
CLDND1-221ENST00000510541 KLK12Q9UKR0 248 aa11.5□□□□□ -0.57
CLDND1-221ENST00000510541 CARHSP1Q9Y2V2 147 aaKnown RBP11.5□□□□□ -0.57
CLDND1-221ENST00000510541 PSCAO43653 123 aa11.49□□□□□ -0.57
CLDND1-221ENST00000510541 ESDP10768 282 aa11.49□□□□□ -0.57
CLDND1-221ENST00000510541 AMTP48728 403 aa11.49□□□□□ -0.57
CLDND1-221ENST00000510541 MRPL51Q4U2R6 128 aaKnown RBP11.49□□□□□ -0.57
CLDND1-221ENST00000510541 COMMD7Q86VX2 200 aa11.49□□□□□ -0.57
CLDND1-221ENST00000510541 BTF3L4Q96K17 158 aa11.49□□□□□ -0.57
CLDND1-221ENST00000510541 TRAV8-4A0A0B4J246 113 aa11.48□□□□□ -0.57
CLDND1-221ENST00000510541 VCYO14598 125 aa11.48□□□□□ -0.57
CLDND1-221ENST00000510541 ZNF25P17030 456 aaPredicted RBP11.48□□□□□ -0.57
CLDND1-221ENST00000510541 SUMO2P61956 95 aaKnown RBP11.48□□□□□ -0.57
CLDND1-221ENST00000510541 ENHOQ6UWT2 76 aa11.48□□□□□ -0.57
CLDND1-221ENST00000510541 LAMTOR2Q9Y2Q5 125 aa11.48□□□□□ -0.57
CLDND1-221ENST00000510541 PRSS47A8MTI9 375 aa11.47□□□□□ -0.57
CLDND1-221ENST00000510541 RPS10P46783 165 aaKnown RBP11.47□□□□□ -0.57
CLDND1-221ENST00000510541 SPATA12Q7Z6I5 190 aa11.47□□□□□ -0.57
CLDND1-221ENST00000510541 APCSP02743 223 aa11.46□□□□□ -0.57
CLDND1-221ENST00000510541 ANGP03950 147 aaKnown RBP11.46□□□□□ -0.57
CLDND1-221ENST00000510541 PMCHP20382 165 aa11.46□□□□□ -0.57
CLDND1-221ENST00000510541 CAMPP49913 170 aa11.46□□□□□ -0.57
CLDND1-221ENST00000510541 MRPL52Q86TS9 123 aaKnown RBP11.46□□□□□ -0.57
CLDND1-221ENST00000510541 C20orf203Q8NBC4 194 aa11.46□□□□□ -0.57
CLDND1-221ENST00000510541 Q9HAA7 133 aa11.46□□□□□ -0.57
CLDND1-221ENST00000510541 CSDC2Q9Y534 153 aaKnown RBP11.46□□□□□ -0.57
CLDND1-221ENST00000510541 UBE2L6O14933 153 aa11.45□□□□□ -0.58
CLDND1-221ENST00000510541 GAS8-AS1O95177 125 aa11.45□□□□□ -0.58
CLDND1-221ENST00000510541 CRPP02741 224 aa11.45□□□□□ -0.58
CLDND1-221ENST00000510541 KRTAP10-2P60368 255 aa11.45□□□□□ -0.58
CLDND1-221ENST00000510541 MRPL54Q6P161 138 aaKnown RBP11.45□□□□□ -0.58
CLDND1-221ENST00000510541 Q8N976 141 aa11.45□□□□□ -0.58
CLDND1-221ENST00000510541 UBE2WQ96B02 151 aa11.45□□□□□ -0.58
CLDND1-221ENST00000510541 C1orf43Q9BWL3 253 aa11.45□□□□□ -0.58
CLDND1-221ENST00000510541 C16orf90A8MZG2 172 aa11.44□□□□□ -0.58
CLDND1-221ENST00000510541 CDK2AP2O75956 126 aa11.44□□□□□ -0.58
CLDND1-221ENST00000510541 TSHBP01222 138 aa11.44□□□□□ -0.58
CLDND1-221ENST00000510541 CKS2P33552 79 aa11.44□□□□□ -0.58
CLDND1-221ENST00000510541 SMAGPQ0VAQ4 97 aa11.44□□□□□ -0.58
CLDND1-221ENST00000510541 GAGE6Q13070 117 aa11.44□□□□□ -0.58
CLDND1-221ENST00000510541 RHEBQ15382 184 aa11.44□□□□□ -0.58
CLDND1-221ENST00000510541 KIR2DL4Q99706 377 aa11.44□□□□□ -0.58
CLDND1-221ENST00000510541 DNAH11Q96DT5 4516 aa11.44□□□□□ -0.58
CLDND1-221ENST00000510541 ORMDL3Q8N138 153 aa11.43□□□□□ -0.58
CLDND1-221ENST00000510541 Q8N814 137 aa11.43□□□□□ -0.58
CLDND1-221ENST00000510541 MAPKAPK5-AS1Q8N8E1 139 aa11.43□□□□□ -0.58
CLDND1-221ENST00000510541 TNFRSF6BO95407 300 aa11.42□□□□□ -0.58
CLDND1-221ENST00000510541 REG3AQ06141 175 aa11.42□□□□□ -0.58
CLDND1-221ENST00000510541 COX19Q49B96 90 aa11.42□□□□□ -0.58
CLDND1-221ENST00000510541 KRTAP26-1Q6PEX3 210 aa11.42□□□□□ -0.58
CLDND1-221ENST00000510541 LINC00269Q8N2A0 174 aa11.42□□□□□ -0.58
CLDND1-221ENST00000510541 IGLV4-60A0A075B6I1 120 aa11.41□□□□□ -0.58
CLDND1-221ENST00000510541 IGKV2D-24A0A075B6R9 120 aa11.41□□□□□ -0.58
CLDND1-221ENST00000510541 C14orf177Q52M58 125 aa11.41□□□□□ -0.58
CLDND1-221ENST00000510541 TIMM21Q9BVV7 248 aa11.41□□□□□ -0.58
CLDND1-221ENST00000510541 C7orf77A4D0Y5 90 aa11.4□□□□□ -0.58
CLDND1-221ENST00000510541 D6R8Y8 96 aa11.4□□□□□ -0.58
CLDND1-221ENST00000510541 FGF6P10767 208 aa11.4□□□□□ -0.58
CLDND1-221ENST00000510541 K7EMI3 77 aa11.39□□□□□ -0.59
CLDND1-221ENST00000510541 CCL25O15444 150 aa11.39□□□□□ -0.59
CLDND1-221ENST00000510541 TMEM136Q6ZRR5 245 aa11.39□□□□□ -0.59
CLDND1-221ENST00000510541 TMEM18Q96B42 140 aa11.39□□□□□ -0.59
CLDND1-221ENST00000510541 SMIM2Q9BVW6 85 aa11.39□□□□□ -0.59
CLDND1-221ENST00000510541 SMKR1H3BMG3 65 aa11.38□□□□□ -0.59
CLDND1-221ENST00000510541 S100PP25815 95 aa11.38□□□□□ -0.59
CLDND1-221ENST00000510541 AMMECR1LQ6DCA0 310 aa11.38□□□□□ -0.59
CLDND1-221ENST00000510541 CLRN3Q8NCR9 226 aa11.38□□□□□ -0.59
CLDND1-221ENST00000510541 FCER1GP30273 86 aa11.37□□□□□ -0.59
CLDND1-221ENST00000510541 OR5A1Q8NGJ0 315 aa11.37□□□□□ -0.59
CLDND1-221ENST00000510541 PRELID3AQ96N28 172 aa11.37□□□□□ -0.59
CLDND1-221ENST00000510541 NPYP01303 97 aa11.36□□□□□ -0.59
CLDND1-221ENST00000510541 HLA-DQA1P01909 254 aa11.36□□□□□ -0.59
CLDND1-221ENST00000510541 NDUFA5Q16718 116 aa11.36□□□□□ -0.59
CLDND1-221ENST00000510541 SVBPQ8N300 66 aa11.36□□□□□ -0.59
CLDND1-221ENST00000510541 TMEM101Q96IK0 257 aa11.36□□□□□ -0.59
CLDND1-221ENST00000510541 GNB1LQ9BYB4 327 aa11.36□□□□□ -0.59
CLDND1-221ENST00000510541 CDC42SE2Q9NRR3 84 aa11.36□□□□□ -0.59
CLDND1-221ENST00000510541 DYNC1H1Q14204 4646 aaKnown RBP11.35□□□□□ -0.59
CLDND1-221ENST00000510541 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.34□□□□□ -0.59
CLDND1-221ENST00000510541 IGKV2-29A2NJV5 120 aaPredicted RBP11.34□□□□□ -0.59
CLDND1-221ENST00000510541 SNAPINO95295 136 aa11.34□□□□□ -0.59
CLDND1-221ENST00000510541 MT-ND6P03923 174 aa11.34□□□□□ -0.59
CLDND1-221ENST00000510541 GCSHP23434 173 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms