RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 GAGE6Q13070 117 aa6.64□□□□□ -1.35
DDX41-211ENST00000510171 CLPSL2Q6UWE3 100 aa6.64□□□□□ -1.35
DDX41-211ENST00000510171 Q6ZNX1 250 aa6.64□□□□□ -1.35
DDX41-211ENST00000510171 NUDT10Q8NFP7 164 aa6.64□□□□□ -1.35
DDX41-211ENST00000510171 NUDT11Q96G61 164 aa6.64□□□□□ -1.35
DDX41-211ENST00000510171 CNFNQ9BYD5 112 aa6.64□□□□□ -1.35
DDX41-211ENST00000510171 RPP21Q9H633 154 aaKnown RBP6.64□□□□□ -1.35
DDX41-211ENST00000510171 NIT2Q9NQR4 276 aa6.64□□□□□ -1.35
DDX41-211ENST00000510171 IGHV3-64A0A075B6Q5 118 aa6.63□□□□□ -1.35
DDX41-211ENST00000510171 hDV102S1A0JD36 115 aa6.63□□□□□ -1.35
DDX41-211ENST00000510171 TMEM250H0YL14 139 aa6.63□□□□□ -1.35
DDX41-211ENST00000510171 NKX2-5P52952 324 aaPredicted RBP6.63□□□□□ -1.35
DDX41-211ENST00000510171 CNBPP62633 177 aaKnown RBP6.63□□□□□ -1.35
DDX41-211ENST00000510171 BLOC1S1P78537 153 aa6.63□□□□□ -1.35
DDX41-211ENST00000510171 CIRBPQ14011 172 aaKnown RBP6.63□□□□□ -1.35
DDX41-211ENST00000510171 RNF185Q96GF1 192 aa6.63□□□□□ -1.35
DDX41-211ENST00000510171 PGLYRP4Q96LB8 373 aa6.63□□□□□ -1.35
DDX41-211ENST00000510171 TMEM243Q9BU79 118 aa6.63□□□□□ -1.35
DDX41-211ENST00000510171 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.62□□□□□ -1.35
DDX41-211ENST00000510171 A0A1B0GUV1 79 aa6.62□□□□□ -1.35
DDX41-211ENST00000510171 REG3AQ06141 175 aa6.62□□□□□ -1.35
DDX41-211ENST00000510171 TWIST1Q15672 202 aa6.62□□□□□ -1.35
DDX41-211ENST00000510171 SMIM15Q7Z3B0 74 aa6.62□□□□□ -1.35
DDX41-211ENST00000510171 OCC1Q8TAD7 63 aa6.62□□□□□ -1.35
DDX41-211ENST00000510171 AP5S1Q9NUS5 200 aa6.62□□□□□ -1.35
DDX41-211ENST00000510171 IGLV10-54A0A075B6I4 117 aa6.61□□□□□ -1.35
DDX41-211ENST00000510171 A0A087WYN8 130 aa6.61□□□□□ -1.35
DDX41-211ENST00000510171 TRAV8-4A0A0B4J246 113 aa6.61□□□□□ -1.35
DDX41-211ENST00000510171 K7EN84 100 aa6.61□□□□□ -1.35
DDX41-211ENST00000510171 UBE2L6O14933 153 aa6.61□□□□□ -1.35
DDX41-211ENST00000510171 COTL1Q14019 142 aa6.61□□□□□ -1.35
DDX41-211ENST00000510171 RNASE7Q9H1E1 156 aaKnown RBP6.61□□□□□ -1.35
DDX41-211ENST00000510171 SLPIP03973 132 aa6.6□□□□□ -1.35
DDX41-211ENST00000510171 CHTF8P0CG12 524 aa6.6□□□□□ -1.35
DDX41-211ENST00000510171 TEX261Q6UWH6 196 aa6.6□□□□□ -1.35
DDX41-211ENST00000510171 ALKAL2Q6UX46 152 aa6.6□□□□□ -1.35
DDX41-211ENST00000510171 LYPD6BQ8NI32 183 aa6.6□□□□□ -1.35
DDX41-211ENST00000510171 SPACA4Q8TDM5 124 aa6.6□□□□□ -1.35
DDX41-211ENST00000510171 C7orf33Q8WU49 177 aa6.6□□□□□ -1.35
DDX41-211ENST00000510171 A8MWL6 223 aa6.59□□□□□ -1.35
DDX41-211ENST00000510171 AMTP48728 403 aa6.59□□□□□ -1.35
DDX41-211ENST00000510171 CT83Q5H943 113 aa6.59□□□□□ -1.35
DDX41-211ENST00000510171 FAM231DQ6ZW35 169 aa6.59□□□□□ -1.35
DDX41-211ENST00000510171 C20orf203Q8NBC4 194 aa6.59□□□□□ -1.35
DDX41-211ENST00000510171 GTSF1Q8WW33 167 aa6.59□□□□□ -1.35
DDX41-211ENST00000510171 PLAC8Q9NZF1 115 aa6.59□□□□□ -1.35
DDX41-211ENST00000510171 hCG_2014768A0A024R1R8 64 aa6.58□□□□□ -1.36
DDX41-211ENST00000510171 PHOX2AO14813 284 aa6.58□□□□□ -1.36
DDX41-211ENST00000510171 GATCO43716 136 aaKnown RBP6.58□□□□□ -1.36
DDX41-211ENST00000510171 NDUFS6O75380 124 aaKnown RBP6.58□□□□□ -1.36
DDX41-211ENST00000510171 NCR2O95944 276 aa6.58□□□□□ -1.36
DDX41-211ENST00000510171 GATD1Q8NB37 220 aa6.58□□□□□ -1.36
DDX41-211ENST00000510171 LINC01600Q96MT4 127 aa6.58□□□□□ -1.36
DDX41-211ENST00000510171 IGLV4-60A0A075B6I1 120 aa6.57□□□□□ -1.36
DDX41-211ENST00000510171 TRAV26-2A0A0B4J265 109 aa6.57□□□□□ -1.36
DDX41-211ENST00000510171 H7C423 109 aa6.57□□□□□ -1.36
DDX41-211ENST00000510171 CFAP161Q6P656 301 aa6.57□□□□□ -1.36
DDX41-211ENST00000510171 BORCS7Q96B45 105 aa6.57□□□□□ -1.36
DDX41-211ENST00000510171 SMIM7Q9BQ49 75 aa6.57□□□□□ -1.36
DDX41-211ENST00000510171 EIF5A2Q9GZV4 153 aaKnown RBP6.57□□□□□ -1.36
DDX41-211ENST00000510171 CEBPGP53567 150 aa6.56□□□□□ -1.36
DDX41-211ENST00000510171 FOXA3P55318 350 aaPredicted RBP6.56□□□□□ -1.36
DDX41-211ENST00000510171 AMMECR1LQ6DCA0 310 aa6.56□□□□□ -1.36
DDX41-211ENST00000510171 FAM210AQ96ND0 272 aa6.56□□□□□ -1.36
DDX41-211ENST00000510171 GFRA4Q9GZZ7 299 aa6.56□□□□□ -1.36
DDX41-211ENST00000510171 FAM231BA6NCW3 169 aa6.55□□□□□ -1.36
DDX41-211ENST00000510171 SDHAF1A6NFY7 115 aa6.55□□□□□ -1.36
DDX41-211ENST00000510171 APCSP02743 223 aa6.55□□□□□ -1.36
DDX41-211ENST00000510171 RPS10P46783 165 aaKnown RBP6.55□□□□□ -1.36
DDX41-211ENST00000510171 COX6A2Q02221 97 aa6.55□□□□□ -1.36
DDX41-211ENST00000510171 MAJINQ3KP22 176 aa6.55□□□□□ -1.36
DDX41-211ENST00000510171 LINC01551Q86U37 167 aa6.55□□□□□ -1.36
DDX41-211ENST00000510171 TSKUQ8WUA8 353 aa6.55□□□□□ -1.36
DDX41-211ENST00000510171 RPL39LQ96EH5 51 aaKnown RBP6.55□□□□□ -1.36
DDX41-211ENST00000510171 PKHD1L1Q86WI1 4243 aa6.54□□□□□ -1.36
DDX41-211ENST00000510171 RNF213Q63HN8 5207 aa6.54□□□□□ -1.36
DDX41-211ENST00000510171 TRBV6-5A0A0K0K1A5 114 aa6.54□□□□□ -1.36
DDX41-211ENST00000510171 A0A1B0GUT8 65 aa6.54□□□□□ -1.36
DDX41-211ENST00000510171 GAGE12HA6NDE8 117 aa6.54□□□□□ -1.36
DDX41-211ENST00000510171 ZNF727A8MUV8 499 aa6.54□□□□□ -1.36
DDX41-211ENST00000510171 HIGD1CA8MV81 97 aa6.54□□□□□ -1.36
DDX41-211ENST00000510171 I3L3M4 83 aa6.54□□□□□ -1.36
DDX41-211ENST00000510171 ZNF25P17030 456 aaPredicted RBP6.54□□□□□ -1.36
DDX41-211ENST00000510171 PRSS3P2Q8NHM4 247 aa6.54□□□□□ -1.36
DDX41-211ENST00000510171 OSTCQ9NRP0 149 aa6.54□□□□□ -1.36
DDX41-211ENST00000510171 IGKV2-24A0A0C4DH68 120 aa6.53□□□□□ -1.36
DDX41-211ENST00000510171 A0A0J9YXV3 536 aa6.53□□□□□ -1.36
DDX41-211ENST00000510171 PMCHP20382 165 aa6.53□□□□□ -1.36
DDX41-211ENST00000510171 PRR3P79522 188 aaKnown RBP6.53□□□□□ -1.36
DDX41-211ENST00000510171 ODF1Q14990 250 aa6.53□□□□□ -1.36
DDX41-211ENST00000510171 RNASEKQ6P5S7 137 aaKnown RBP6.53□□□□□ -1.36
DDX41-211ENST00000510171 STPG4Q8N801 248 aa6.53□□□□□ -1.36
DDX41-211ENST00000510171 C15orf56Q8N910 161 aa6.53□□□□□ -1.36
DDX41-211ENST00000510171 TMEM191AQ9H0A3 160 aa6.53□□□□□ -1.36
DDX41-211ENST00000510171 ST20Q9HBF5 79 aa6.53□□□□□ -1.36
DDX41-211ENST00000510171 FGF6P10767 208 aa6.52□□□□□ -1.37
DDX41-211ENST00000510171 KRTAP10-8P60410 259 aa6.52□□□□□ -1.37
DDX41-211ENST00000510171 HIGD2BQ4VC39 106 aa6.52□□□□□ -1.37
DDX41-211ENST00000510171 FAM74A3Q4VXF1 159 aa6.52□□□□□ -1.37
DDX41-211ENST00000510171 REG3GQ6UW15 175 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms