RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 IBA57-AS1B1ANH7 110 aa6.21□□□□□ -1.42
NUP54-207ENST00000508583 TMEM262E9PQX1 116 aa6.21□□□□□ -1.42
NUP54-207ENST00000508583 I3L3M4 83 aa6.21□□□□□ -1.42
NUP54-207ENST00000508583 UBE2L6O14933 153 aa6.21□□□□□ -1.42
NUP54-207ENST00000508583 TCAPO15273 167 aa6.21□□□□□ -1.42
NUP54-207ENST00000508583 CKS2P33552 79 aa6.21□□□□□ -1.42
NUP54-207ENST00000508583 CLRN3Q8NCR9 226 aa6.21□□□□□ -1.42
NUP54-207ENST00000508583 RMI2Q96E14 147 aa6.21□□□□□ -1.42
NUP54-207ENST00000508583 RNF185Q96GF1 192 aa6.21□□□□□ -1.42
NUP54-207ENST00000508583 COX11Q9Y6N1 276 aa6.21□□□□□ -1.42
NUP54-207ENST00000508583 C7orf77A4D0Y5 90 aa6.2□□□□□ -1.42
NUP54-207ENST00000508583 PRSS29PA6NIE9 313 aa6.2□□□□□ -1.42
NUP54-207ENST00000508583 PHOX2AO14813 284 aa6.2□□□□□ -1.42
NUP54-207ENST00000508583 IGHV3-30P01768 117 aa6.2□□□□□ -1.42
NUP54-207ENST00000508583 IGHV3-33P01772 117 aa6.2□□□□□ -1.42
NUP54-207ENST00000508583 APOC3P02656 99 aa6.2□□□□□ -1.42
NUP54-207ENST00000508583 APCSP02743 223 aa6.2□□□□□ -1.42
NUP54-207ENST00000508583 IGHV3-30-3P0DP02 117 aa6.2□□□□□ -1.42
NUP54-207ENST00000508583 IGHV3-30-5P0DP03 117 aa6.2□□□□□ -1.42
NUP54-207ENST00000508583 PMCHP20382 165 aa6.2□□□□□ -1.42
NUP54-207ENST00000508583 AMTP48728 403 aa6.2□□□□□ -1.42
NUP54-207ENST00000508583 SMAGPQ0VAQ4 97 aa6.2□□□□□ -1.42
NUP54-207ENST00000508583 Q0VG73 95 aa6.2□□□□□ -1.42
NUP54-207ENST00000508583 COX19Q49B96 90 aa6.2□□□□□ -1.42
NUP54-207ENST00000508583 MRPL51Q4U2R6 128 aaKnown RBP6.2□□□□□ -1.42
NUP54-207ENST00000508583 ORMDL3Q8N138 153 aa6.2□□□□□ -1.42
NUP54-207ENST00000508583 RPL39LQ96EH5 51 aaKnown RBP6.2□□□□□ -1.42
NUP54-207ENST00000508583 KIR2DL4Q99706 377 aa6.2□□□□□ -1.42
NUP54-207ENST00000508583 C20orf78Q9BR46 151 aa6.2□□□□□ -1.42
NUP54-207ENST00000508583 TM2D2Q9BX73 214 aa6.2□□□□□ -1.42
NUP54-207ENST00000508583 KRTAP1-5Q9BYS1 174 aa6.2□□□□□ -1.42
NUP54-207ENST00000508583 RPS10P5Q9NQ39 176 aa6.2□□□□□ -1.42
NUP54-207ENST00000508583 LAMTOR2Q9Y2Q5 125 aa6.2□□□□□ -1.42
NUP54-207ENST00000508583 TRBV27A0A0K0K1C4 114 aa6.19□□□□□ -1.42
NUP54-207ENST00000508583 H7C423 109 aa6.19□□□□□ -1.42
NUP54-207ENST00000508583 VCYO14598 125 aa6.19□□□□□ -1.42
NUP54-207ENST00000508583 EREGO14944 169 aa6.19□□□□□ -1.42
NUP54-207ENST00000508583 CRPP02741 224 aa6.19□□□□□ -1.42
NUP54-207ENST00000508583 SUMO2P61956 95 aaKnown RBP6.19□□□□□ -1.42
NUP54-207ENST00000508583 TMEM70Q9BUB7 260 aa6.19□□□□□ -1.42
NUP54-207ENST00000508583 DNAH6Q9C0G6 4158 aa6.19□□□□□ -1.42
NUP54-207ENST00000508583 DNAH2Q9P225 4427 aa6.18□□□□□ -1.42
NUP54-207ENST00000508583 TRBV24-1A0A075B6N3 115 aa6.18□□□□□ -1.42
NUP54-207ENST00000508583 D6R8Y8 96 aa6.18□□□□□ -1.42
NUP54-207ENST00000508583 RTL8CO15255 209 aa6.18□□□□□ -1.42
NUP54-207ENST00000508583 PSCAO43653 123 aa6.18□□□□□ -1.42
NUP54-207ENST00000508583 HLA-DQA1P01909 254 aa6.18□□□□□ -1.42
NUP54-207ENST00000508583 ANGP03950 147 aaKnown RBP6.18□□□□□ -1.42
NUP54-207ENST00000508583 FCER1GP30273 86 aa6.18□□□□□ -1.42
NUP54-207ENST00000508583 RPL32P62910 135 aaKnown RBP6.18□□□□□ -1.42
NUP54-207ENST00000508583 NTM-AS1Q6ZSK4 140 aa6.18□□□□□ -1.42
NUP54-207ENST00000508583 EPPK1P58107 5090 aaKnown RBP6.18□□□□□ -1.42
NUP54-207ENST00000508583 A0A1B0GUV1 79 aa6.17□□□□□ -1.42
NUP54-207ENST00000508583 TNFRSF6BO95407 300 aa6.17□□□□□ -1.42
NUP54-207ENST00000508583 MT-ND6P03923 174 aa6.17□□□□□ -1.42
NUP54-207ENST00000508583 ZNF25P17030 456 aaPredicted RBP6.17□□□□□ -1.42
NUP54-207ENST00000508583 RPS10P46783 165 aaKnown RBP6.17□□□□□ -1.42
NUP54-207ENST00000508583 POLR2KP53803 58 aaKnown RBP6.17□□□□□ -1.42
NUP54-207ENST00000508583 GAGE6Q13070 117 aa6.17□□□□□ -1.42
NUP54-207ENST00000508583 AMMECR1LQ6DCA0 310 aa6.17□□□□□ -1.42
NUP54-207ENST00000508583 TMEM136Q6ZRR5 245 aa6.17□□□□□ -1.42
NUP54-207ENST00000508583 NRACQ8N912 160 aa6.17□□□□□ -1.42
NUP54-207ENST00000508583 TMEM18Q96B42 140 aa6.17□□□□□ -1.42
NUP54-207ENST00000508583 Q9HAA7 133 aa6.17□□□□□ -1.42
NUP54-207ENST00000508583 KLK12Q9UKR0 248 aa6.17□□□□□ -1.42
NUP54-207ENST00000508583 FRAS1Q86XX4 4008 aa6.17□□□□□ -1.42
NUP54-207ENST00000508583 SMKR1H3BMG3 65 aa6.16□□□□□ -1.42
NUP54-207ENST00000508583 RBX1P62877 108 aa6.16□□□□□ -1.42
NUP54-207ENST00000508583 MIAQ16674 131 aa6.16□□□□□ -1.42
NUP54-207ENST00000508583 MPV17L2Q567V2 206 aa6.16□□□□□ -1.42
NUP54-207ENST00000508583 ATRAIDQ6UW56 229 aa6.16□□□□□ -1.42
NUP54-207ENST00000508583 UBE2WQ96B02 151 aa6.16□□□□□ -1.42
NUP54-207ENST00000508583 TMEM101Q96IK0 257 aa6.16□□□□□ -1.42
NUP54-207ENST00000508583 PRELID3AQ96N28 172 aa6.16□□□□□ -1.42
NUP54-207ENST00000508583 GNB1LQ9BYB4 327 aa6.16□□□□□ -1.42
NUP54-207ENST00000508583 DNAH10Q8IVF4 4471 aa6.16□□□□□ -1.42
NUP54-207ENST00000508583 RAB5AP20339 215 aa6.15□□□□□ -1.42
NUP54-207ENST00000508583 SMIM2Q9BVW6 85 aa6.15□□□□□ -1.42
NUP54-207ENST00000508583 C1orf43Q9BWL3 253 aa6.15□□□□□ -1.42
NUP54-207ENST00000508583 MAP1LC3AQ9H492 121 aa6.15□□□□□ -1.42
NUP54-207ENST00000508583 TRAV8-4A0A0B4J246 113 aa6.14□□□□□ -1.43
NUP54-207ENST00000508583 K7EMI3 77 aa6.14□□□□□ -1.43
NUP54-207ENST00000508583 GAS8-AS1O95177 125 aa6.14□□□□□ -1.43
NUP54-207ENST00000508583 TSHBP01222 138 aa6.14□□□□□ -1.43
NUP54-207ENST00000508583 TNP2Q05952 138 aa6.14□□□□□ -1.43
NUP54-207ENST00000508583 RNASEKQ6P5S7 137 aaKnown RBP6.14□□□□□ -1.43
NUP54-207ENST00000508583 Q6ZRN7 208 aaPredicted RBP6.14□□□□□ -1.43
NUP54-207ENST00000508583 Q8N976 141 aa6.14□□□□□ -1.43
NUP54-207ENST00000508583 IGKV2D-24A0A075B6R9 120 aa6.13□□□□□ -1.43
NUP54-207ENST00000508583 PRSS47A8MTI9 375 aa6.13□□□□□ -1.43
NUP54-207ENST00000508583 NPYP01303 97 aa6.13□□□□□ -1.43
NUP54-207ENST00000508583 FGF6P10767 208 aa6.13□□□□□ -1.43
NUP54-207ENST00000508583 ESDP10768 282 aa6.13□□□□□ -1.43
NUP54-207ENST00000508583 G0S2P27469 103 aa6.13□□□□□ -1.43
NUP54-207ENST00000508583 DGAT2L7PQ6IED9 249 aa6.13□□□□□ -1.43
NUP54-207ENST00000508583 LINC00269Q8N2A0 174 aa6.13□□□□□ -1.43
NUP54-207ENST00000508583 OR5A1Q8NGJ0 315 aa6.13□□□□□ -1.43
NUP54-207ENST00000508583 NXT2Q9NPJ8 142 aaKnown RBP6.13□□□□□ -1.43
NUP54-207ENST00000508583 PRR34Q9NV39 138 aa6.13□□□□□ -1.43
NUP54-207ENST00000508583 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms