RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 RPP21Q9H633 154 aaKnown RBP5.94□□□□□ -1.46
PDLIM5-209ENST00000506632 FLG2Q5D862 2391 aaPredicted RBP5.93□□□□□ -1.46
PDLIM5-209ENST00000506632 NDUFS6O75380 124 aaKnown RBP5.93□□□□□ -1.46
PDLIM5-209ENST00000506632 ANGP03950 147 aaKnown RBP5.93□□□□□ -1.46
PDLIM5-209ENST00000506632 RBX1P62877 108 aa5.93□□□□□ -1.46
PDLIM5-209ENST00000506632 MIAQ16674 131 aa5.93□□□□□ -1.46
PDLIM5-209ENST00000506632 KRTAP26-1Q6PEX3 210 aa5.93□□□□□ -1.46
PDLIM5-209ENST00000506632 RASL11AQ6T310 242 aa5.93□□□□□ -1.46
PDLIM5-209ENST00000506632 NIT2Q9NQR4 276 aa5.93□□□□□ -1.46
PDLIM5-209ENST00000506632 SRRM2Q9UQ35 2752 aaKnown RBP5.93□□□□□ -1.46
PDLIM5-209ENST00000506632 DMBT1Q9UGM3 2413 aaPredicted RBP5.93□□□□□ -1.46
PDLIM5-209ENST00000506632 IGHV1-24A0A0C4DH33 117 aa5.92□□□□□ -1.46
PDLIM5-209ENST00000506632 CRPP02741 224 aa5.92□□□□□ -1.46
PDLIM5-209ENST00000506632 INAFM2P0DMQ5 153 aa5.92□□□□□ -1.46
PDLIM5-209ENST00000506632 NKX2-5P52952 324 aaPredicted RBP5.92□□□□□ -1.46
PDLIM5-209ENST00000506632 GAGE6Q13070 117 aa5.92□□□□□ -1.46
PDLIM5-209ENST00000506632 LINC01620Q4KN68 170 aa5.92□□□□□ -1.46
PDLIM5-209ENST00000506632 FAM231DQ6ZW35 169 aa5.92□□□□□ -1.46
PDLIM5-209ENST00000506632 GTSF1Q8WW33 167 aa5.92□□□□□ -1.46
PDLIM5-209ENST00000506632 PGLYRP4Q96LB8 373 aa5.92□□□□□ -1.46
PDLIM5-209ENST00000506632 A0A1B0GUV1 79 aa5.91□□□□□ -1.46
PDLIM5-209ENST00000506632 TWIST1Q15672 202 aa5.91□□□□□ -1.46
PDLIM5-209ENST00000506632 C14orf177Q52M58 125 aa5.91□□□□□ -1.46
PDLIM5-209ENST00000506632 LINC00269Q8N2A0 174 aa5.91□□□□□ -1.46
PDLIM5-209ENST00000506632 GATD1Q8NB37 220 aa5.91□□□□□ -1.46
PDLIM5-209ENST00000506632 C20orf203Q8NBC4 194 aa5.91□□□□□ -1.46
PDLIM5-209ENST00000506632 A0A1B0GVG6 124 aa5.9□□□□□ -1.46
PDLIM5-209ENST00000506632 USP17L23D6RBM5 183 aa5.9□□□□□ -1.46
PDLIM5-209ENST00000506632 GATCO43716 136 aaKnown RBP5.9□□□□□ -1.46
PDLIM5-209ENST00000506632 FOXA3P55318 350 aaPredicted RBP5.9□□□□□ -1.46
PDLIM5-209ENST00000506632 FAM210AQ96ND0 272 aa5.9□□□□□ -1.46
PDLIM5-209ENST00000506632 TMEM243Q9BU79 118 aa5.9□□□□□ -1.46
PDLIM5-209ENST00000506632 IGLV4-60A0A075B6I1 120 aa5.89□□□□□ -1.47
PDLIM5-209ENST00000506632 TRAV26-2A0A0B4J265 109 aa5.89□□□□□ -1.47
PDLIM5-209ENST00000506632 A8MWL6 223 aa5.89□□□□□ -1.47
PDLIM5-209ENST00000506632 SCGB1D1O95968 90 aa5.89□□□□□ -1.47
PDLIM5-209ENST00000506632 HLA-DQA1P01909 254 aa5.89□□□□□ -1.47
PDLIM5-209ENST00000506632 PRSS1P07477 247 aa5.89□□□□□ -1.47
PDLIM5-209ENST00000506632 REG3AQ06141 175 aa5.89□□□□□ -1.47
PDLIM5-209ENST00000506632 CLPSL2Q6UWE3 100 aa5.89□□□□□ -1.47
PDLIM5-209ENST00000506632 SCXQ7RTU7 201 aa5.89□□□□□ -1.47
PDLIM5-209ENST00000506632 LINC01551Q86U37 167 aa5.89□□□□□ -1.47
PDLIM5-209ENST00000506632 SMIM7Q9BQ49 75 aa5.89□□□□□ -1.47
PDLIM5-209ENST00000506632 GFRA4Q9GZZ7 299 aa5.89□□□□□ -1.47
PDLIM5-209ENST00000506632 MYCBP2O75592 4640 aa5.88□□□□□ -1.47
PDLIM5-209ENST00000506632 SRP19P09132 144 aaKnown RBP5.88□□□□□ -1.47
PDLIM5-209ENST00000506632 AMTP48728 403 aa5.88□□□□□ -1.47
PDLIM5-209ENST00000506632 SRSF3P84103 164 aaKnown RBP5.88□□□□□ -1.47
PDLIM5-209ENST00000506632 COTL1Q14019 142 aa5.88□□□□□ -1.47
PDLIM5-209ENST00000506632 RPL39LQ96EH5 51 aaKnown RBP5.88□□□□□ -1.47
PDLIM5-209ENST00000506632 CHAC1Q9BUX1 264 aa5.88□□□□□ -1.47
PDLIM5-209ENST00000506632 EIF5A2Q9GZV4 153 aaKnown RBP5.88□□□□□ -1.47
PDLIM5-209ENST00000506632 TRAV8-4A0A0B4J246 113 aa5.87□□□□□ -1.47
PDLIM5-209ENST00000506632 FAM231BA6NCW3 169 aa5.87□□□□□ -1.47
PDLIM5-209ENST00000506632 B5MCH6 92 aa5.87□□□□□ -1.47
PDLIM5-209ENST00000506632 NCR2O95944 276 aa5.87□□□□□ -1.47
PDLIM5-209ENST00000506632 CEBPGP53567 150 aa5.87□□□□□ -1.47
PDLIM5-209ENST00000506632 DGAT2L7PQ6IED9 249 aa5.87□□□□□ -1.47
PDLIM5-209ENST00000506632 TEX261Q6UWH6 196 aa5.87□□□□□ -1.47
PDLIM5-209ENST00000506632 SMIM15Q7Z3B0 74 aa5.87□□□□□ -1.47
PDLIM5-209ENST00000506632 DEFB104AQ8WTQ1 72 aa5.87□□□□□ -1.47
PDLIM5-209ENST00000506632 TSKUQ8WUA8 353 aa5.87□□□□□ -1.47
PDLIM5-209ENST00000506632 OSTCQ9NRP0 149 aa5.87□□□□□ -1.47
PDLIM5-209ENST00000506632 IGLV10-54A0A075B6I4 117 aa5.86□□□□□ -1.47
PDLIM5-209ENST00000506632 TRBV6-5A0A0K0K1A5 114 aa5.86□□□□□ -1.47
PDLIM5-209ENST00000506632 SDHAF1A6NFY7 115 aa5.86□□□□□ -1.47
PDLIM5-209ENST00000506632 ZNF727A8MUV8 499 aa5.86□□□□□ -1.47
PDLIM5-209ENST00000506632 PLA2G1BP04054 148 aaKnown RBP5.86□□□□□ -1.47
PDLIM5-209ENST00000506632 KRTAP10-4P60372 401 aaPredicted RBP5.86□□□□□ -1.47
PDLIM5-209ENST00000506632 C9orf163Q8N9P6 203 aa5.86□□□□□ -1.47
PDLIM5-209ENST00000506632 CIRBP-AS1Q8TBR5 109 aa5.86□□□□□ -1.47
PDLIM5-209ENST00000506632 A0A1B0GUT8 65 aa5.85□□□□□ -1.47
PDLIM5-209ENST00000506632 HIGD1CA8MV81 97 aa5.85□□□□□ -1.47
PDLIM5-209ENST00000506632 H7C423 109 aa5.85□□□□□ -1.47
PDLIM5-209ENST00000506632 UBE2L6O14933 153 aa5.85□□□□□ -1.47
PDLIM5-209ENST00000506632 GAS8-AS1O95177 125 aa5.85□□□□□ -1.47
PDLIM5-209ENST00000506632 RNF185Q96GF1 192 aa5.85□□□□□ -1.47
PDLIM5-209ENST00000506632 TMEM191AQ9H0A3 160 aa5.85□□□□□ -1.47
PDLIM5-209ENST00000506632 V9GYV3 84 aa5.85□□□□□ -1.47
PDLIM5-209ENST00000506632 C9JQL5 133 aa5.84□□□□□ -1.47
PDLIM5-209ENST00000506632 CNBPP62633 177 aaKnown RBP5.84□□□□□ -1.47
PDLIM5-209ENST00000506632 ISOC2Q96AB3 205 aa5.84□□□□□ -1.47
PDLIM5-209ENST00000506632 BORCS7Q96B45 105 aa5.84□□□□□ -1.47
PDLIM5-209ENST00000506632 HERC1Q15751 4861 aa5.83□□□□□ -1.48
PDLIM5-209ENST00000506632 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.83□□□□□ -1.48
PDLIM5-209ENST00000506632 IGKV2-29A2NJV5 120 aaPredicted RBP5.83□□□□□ -1.48
PDLIM5-209ENST00000506632 I3L3M4 83 aa5.83□□□□□ -1.48
PDLIM5-209ENST00000506632 APCSP02743 223 aa5.83□□□□□ -1.48
PDLIM5-209ENST00000506632 SLPIP03973 132 aa5.83□□□□□ -1.48
PDLIM5-209ENST00000506632 ESDP10768 282 aa5.83□□□□□ -1.48
PDLIM5-209ENST00000506632 RAB4AP20338 218 aa5.83□□□□□ -1.48
PDLIM5-209ENST00000506632 RPS10P46783 165 aaKnown RBP5.83□□□□□ -1.48
PDLIM5-209ENST00000506632 POLR2KP53803 58 aaKnown RBP5.83□□□□□ -1.48
PDLIM5-209ENST00000506632 RPL23P62829 140 aaKnown RBP5.83□□□□□ -1.48
PDLIM5-209ENST00000506632 TMEM241Q24JQ0 296 aa5.83□□□□□ -1.48
PDLIM5-209ENST00000506632 FAM74A3Q4VXF1 159 aa5.83□□□□□ -1.48
PDLIM5-209ENST00000506632 SDIM1Q6ZPB5 146 aa5.83□□□□□ -1.48
PDLIM5-209ENST00000506632 TRBV27A0A0K0K1C4 114 aa5.82□□□□□ -1.48
PDLIM5-209ENST00000506632 hDV102S1A0JD36 115 aa5.82□□□□□ -1.48
PDLIM5-209ENST00000506632 PANO1I0J062 215 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms