RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 SLPIP03973 132 aa8.22□□□□□ -1.09
RNF4-206ENST00000504782 TRGC1P0CF51 173 aa8.22□□□□□ -1.09
RNF4-206ENST00000504782 CTRLP40313 264 aa8.22□□□□□ -1.09
RNF4-206ENST00000504782 TWIST1Q15672 202 aa8.22□□□□□ -1.09
RNF4-206ENST00000504782 C9orf163Q8N9P6 203 aa8.22□□□□□ -1.09
RNF4-206ENST00000504782 GATD1Q8NB37 220 aa8.22□□□□□ -1.09
RNF4-206ENST00000504782 GTSF1Q8WW33 167 aa8.22□□□□□ -1.09
RNF4-206ENST00000504782 TMEM243Q9BU79 118 aa8.22□□□□□ -1.09
RNF4-206ENST00000504782 HNRNPA3P51991 378 aaKnown RBP8.21□□□□□ -1.1
RNF4-206ENST00000504782 DGAT2L7PQ6IED9 249 aa8.21□□□□□ -1.1
RNF4-206ENST00000504782 Q6ZNX1 250 aa8.21□□□□□ -1.1
RNF4-206ENST00000504782 SDIM1Q6ZPB5 146 aa8.21□□□□□ -1.1
RNF4-206ENST00000504782 RPL39LQ96EH5 51 aaKnown RBP8.21□□□□□ -1.1
RNF4-206ENST00000504782 RPP21Q9H633 154 aaKnown RBP8.21□□□□□ -1.1
RNF4-206ENST00000504782 A0A1B0GUV1 79 aa8.2□□□□□ -1.1
RNF4-206ENST00000504782 WDR73Q6P4I2 378 aa8.2□□□□□ -1.1
RNF4-206ENST00000504782 ALKAL2Q6UX46 152 aa8.2□□□□□ -1.1
RNF4-206ENST00000504782 PGLYRP4Q96LB8 373 aa8.2□□□□□ -1.1
RNF4-206ENST00000504782 CNFNQ9BYD5 112 aa8.2□□□□□ -1.1
RNF4-206ENST00000504782 BIN3Q9NQY0 253 aa8.2□□□□□ -1.1
RNF4-206ENST00000504782 hCG_2014768A0A024R1R8 64 aa8.18□□□□□ -1.1
RNF4-206ENST00000504782 hDV102S1A0JD36 115 aa8.18□□□□□ -1.1
RNF4-206ENST00000504782 GAS8-AS1O95177 125 aa8.18□□□□□ -1.1
RNF4-206ENST00000504782 AMTP48728 403 aa8.18□□□□□ -1.1
RNF4-206ENST00000504782 COTL1Q14019 142 aa8.18□□□□□ -1.1
RNF4-206ENST00000504782 TRAV8-4A0A0B4J246 113 aa8.17□□□□□ -1.1
RNF4-206ENST00000504782 IGKV3OR2-268A0A0C4DH90 116 aa8.17□□□□□ -1.1
RNF4-206ENST00000504782 UBE2L6O14933 153 aa8.17□□□□□ -1.1
RNF4-206ENST00000504782 CHTF8P0CG12 524 aa8.17□□□□□ -1.1
RNF4-206ENST00000504782 RPL37AP61513 92 aaKnown RBP8.17□□□□□ -1.1
RNF4-206ENST00000504782 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.16□□□□□ -1.1
RNF4-206ENST00000504782 IGKV2-29A2NJV5 120 aaPredicted RBP8.16□□□□□ -1.1
RNF4-206ENST00000504782 GATCO43716 136 aaKnown RBP8.16□□□□□ -1.1
RNF4-206ENST00000504782 TAGLN2P37802 199 aaKnown RBP8.16□□□□□ -1.1
RNF4-206ENST00000504782 CEBPGP53567 150 aa8.16□□□□□ -1.1
RNF4-206ENST00000504782 CNBPP62633 177 aaKnown RBP8.16□□□□□ -1.1
RNF4-206ENST00000504782 C15orf56Q8N910 161 aa8.16□□□□□ -1.1
RNF4-206ENST00000504782 CLRN3Q8NCR9 226 aa8.16□□□□□ -1.1
RNF4-206ENST00000504782 LYPD6BQ8NI32 183 aa8.16□□□□□ -1.1
RNF4-206ENST00000504782 GAGE12HA6NDE8 117 aa8.15□□□□□ -1.1
RNF4-206ENST00000504782 AKAP14Q86UN6 197 aa8.15□□□□□ -1.1
RNF4-206ENST00000504782 FAM231BA6NCW3 169 aa8.14□□□□□ -1.11
RNF4-206ENST00000504782 TMEM250H0YL14 139 aa8.14□□□□□ -1.11
RNF4-206ENST00000504782 BLOC1S1P78537 153 aa8.14□□□□□ -1.11
RNF4-206ENST00000504782 CIRBPQ14011 172 aaKnown RBP8.14□□□□□ -1.11
RNF4-206ENST00000504782 SDHAF1A6NFY7 115 aa8.13□□□□□ -1.11
RNF4-206ENST00000504782 HIGD2BQ4VC39 106 aa8.13□□□□□ -1.11
RNF4-206ENST00000504782 FAM231DQ6ZW35 169 aa8.13□□□□□ -1.11
RNF4-206ENST00000504782 IGHV3-64A0A075B6Q5 118 aa8.12□□□□□ -1.11
RNF4-206ENST00000504782 A8MWL6 223 aa8.12□□□□□ -1.11
RNF4-206ENST00000504782 OXTP01178 125 aa8.12□□□□□ -1.11
RNF4-206ENST00000504782 FGF6P10767 208 aa8.12□□□□□ -1.11
RNF4-206ENST00000504782 RNASEKQ6P5S7 137 aaKnown RBP8.12□□□□□ -1.11
RNF4-206ENST00000504782 CHCHD10Q8WYQ3 142 aaPredicted RBP8.12□□□□□ -1.11
RNF4-206ENST00000504782 A0A087WYN8 130 aa8.11□□□□□ -1.11
RNF4-206ENST00000504782 TSHBP01222 138 aa8.11□□□□□ -1.11
RNF4-206ENST00000504782 APCSP02743 223 aa8.11□□□□□ -1.11
RNF4-206ENST00000504782 RPS10P46783 165 aaKnown RBP8.11□□□□□ -1.11
RNF4-206ENST00000504782 AMMECR1LQ6DCA0 310 aa8.11□□□□□ -1.11
RNF4-206ENST00000504782 LINC01551Q86U37 167 aa8.11□□□□□ -1.11
RNF4-206ENST00000504782 SPACA4Q8TDM5 124 aa8.11□□□□□ -1.11
RNF4-206ENST00000504782 RNF185Q96GF1 192 aa8.11□□□□□ -1.11
RNF4-206ENST00000504782 AP5S1Q9NUS5 200 aa8.11□□□□□ -1.11
RNF4-206ENST00000504782 NCR2O95944 276 aa8.1□□□□□ -1.11
RNF4-206ENST00000504782 SRP19P09132 144 aaKnown RBP8.1□□□□□ -1.11
RNF4-206ENST00000504782 PMCHP20382 165 aa8.1□□□□□ -1.11
RNF4-206ENST00000504782 COX6A2Q02221 97 aa8.1□□□□□ -1.11
RNF4-206ENST00000504782 FOXI1Q12951 378 aa8.1□□□□□ -1.11
RNF4-206ENST00000504782 SMIM15Q7Z3B0 74 aa8.1□□□□□ -1.11
RNF4-206ENST00000504782 PRSS3P2Q8NHM4 247 aa8.1□□□□□ -1.11
RNF4-206ENST00000504782 DPH3Q96FX2 82 aa8.1□□□□□ -1.11
RNF4-206ENST00000504782 EIF5A2Q9GZV4 153 aaKnown RBP8.1□□□□□ -1.11
RNF4-206ENST00000504782 TMEM242Q9NWH2 141 aa8.1□□□□□ -1.11
RNF4-206ENST00000504782 HMCN2Q8NDA2 5059 aa8.1□□□□□ -1.11
RNF4-206ENST00000504782 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.09□□□□□ -1.11
RNF4-206ENST00000504782 TRBV6-5A0A0K0K1A5 114 aa8.09□□□□□ -1.11
RNF4-206ENST00000504782 HIGD1CA8MV81 97 aa8.09□□□□□ -1.11
RNF4-206ENST00000504782 SMKR1H3BMG3 65 aa8.09□□□□□ -1.11
RNF4-206ENST00000504782 I3L3M4 83 aa8.09□□□□□ -1.11
RNF4-206ENST00000504782 ESDP10768 282 aa8.09□□□□□ -1.11
RNF4-206ENST00000504782 CT83Q5H943 113 aa8.09□□□□□ -1.11
RNF4-206ENST00000504782 TSKUQ8WUA8 353 aa8.09□□□□□ -1.11
RNF4-206ENST00000504782 LINC00526Q96FQ7 95 aa8.09□□□□□ -1.11
RNF4-206ENST00000504782 FAM210AQ96ND0 272 aa8.09□□□□□ -1.11
RNF4-206ENST00000504782 SMIM7Q9BQ49 75 aa8.09□□□□□ -1.11
RNF4-206ENST00000504782 A0A1B0GVG6 124 aa8.08□□□□□ -1.12
RNF4-206ENST00000504782 ZNF727A8MUV8 499 aa8.08□□□□□ -1.12
RNF4-206ENST00000504782 H7C423 109 aa8.08□□□□□ -1.12
RNF4-206ENST00000504782 RAB4AP20338 218 aa8.08□□□□□ -1.12
RNF4-206ENST00000504782 POLR2KP53803 58 aaKnown RBP8.08□□□□□ -1.12
RNF4-206ENST00000504782 TEX261Q6UWH6 196 aa8.08□□□□□ -1.12
RNF4-206ENST00000504782 AMN1Q8IY45 258 aa8.08□□□□□ -1.12
RNF4-206ENST00000504782 LINC00959A0A1B0GUT2 108 aa8.07□□□□□ -1.12
RNF4-206ENST00000504782 A0A1B0GUT8 65 aa8.07□□□□□ -1.12
RNF4-206ENST00000504782 MT1HL1P0DM35 61 aa8.07□□□□□ -1.12
RNF4-206ENST00000504782 XCL1P47992 114 aa8.07□□□□□ -1.12
RNF4-206ENST00000504782 CFAP161Q6P656 301 aa8.07□□□□□ -1.12
RNF4-206ENST00000504782 OR5A1Q8NGJ0 315 aa8.07□□□□□ -1.12
RNF4-206ENST00000504782 TMEM191AQ9H0A3 160 aa8.07□□□□□ -1.12
RNF4-206ENST00000504782 ST20Q9HBF5 79 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms