RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 KRTAP10-4P60372 401 aaPredicted RBP9.25□□□□□ -0.93
VTI1A-209ENST00000496445 WDR73Q6P4I2 378 aa9.25□□□□□ -0.93
VTI1A-209ENST00000496445 OCC1Q8TAD7 63 aa9.25□□□□□ -0.93
VTI1A-209ENST00000496445 CIRBP-AS1Q8TBR5 109 aa9.25□□□□□ -0.93
VTI1A-209ENST00000496445 DEFB104AQ8WTQ1 72 aa9.25□□□□□ -0.93
VTI1A-209ENST00000496445 GFRA4Q9GZZ7 299 aa9.25□□□□□ -0.93
VTI1A-209ENST00000496445 REG3AQ06141 175 aa9.24□□□□□ -0.93
VTI1A-209ENST00000496445 ALKAL2Q6UX46 152 aa9.24□□□□□ -0.93
VTI1A-209ENST00000496445 GTSF1Q8WW33 167 aa9.24□□□□□ -0.93
VTI1A-209ENST00000496445 PGLYRP4Q96LB8 373 aa9.24□□□□□ -0.93
VTI1A-209ENST00000496445 NIT2Q9NQR4 276 aa9.24□□□□□ -0.93
VTI1A-209ENST00000496445 hCG_2014768A0A024R1R8 64 aa9.23□□□□□ -0.93
VTI1A-209ENST00000496445 IGLV4-60A0A075B6I1 120 aa9.23□□□□□ -0.93
VTI1A-209ENST00000496445 IGLV10-54A0A075B6I4 117 aa9.23□□□□□ -0.93
VTI1A-209ENST00000496445 TRAV26-2A0A0B4J265 109 aa9.23□□□□□ -0.93
VTI1A-209ENST00000496445 TWIST1Q15672 202 aa9.23□□□□□ -0.93
VTI1A-209ENST00000496445 GATD1Q8NB37 220 aa9.23□□□□□ -0.93
VTI1A-209ENST00000496445 LYPD6BQ8NI32 183 aa9.23□□□□□ -0.93
VTI1A-209ENST00000496445 TMEM243Q9BU79 118 aa9.23□□□□□ -0.93
VTI1A-209ENST00000496445 A0A1B0GUV1 79 aa9.22□□□□□ -0.93
VTI1A-209ENST00000496445 HMCN2Q8NDA2 5059 aa9.21□□□□□ -0.94
VTI1A-209ENST00000496445 TMEM250H0YL14 139 aa9.21□□□□□ -0.94
VTI1A-209ENST00000496445 FOXA3P55318 350 aaPredicted RBP9.21□□□□□ -0.94
VTI1A-209ENST00000496445 RPL39LQ96EH5 51 aaKnown RBP9.21□□□□□ -0.94
VTI1A-209ENST00000496445 AMTP48728 403 aa9.2□□□□□ -0.94
VTI1A-209ENST00000496445 BLOC1S1P78537 153 aa9.2□□□□□ -0.94
VTI1A-209ENST00000496445 COTL1Q14019 142 aa9.2□□□□□ -0.94
VTI1A-209ENST00000496445 FAM231DQ6ZW35 169 aa9.2□□□□□ -0.94
VTI1A-209ENST00000496445 C9orf163Q8N9P6 203 aa9.2□□□□□ -0.94
VTI1A-209ENST00000496445 PANO1I0J062 215 aa9.19□□□□□ -0.94
VTI1A-209ENST00000496445 GATCO43716 136 aaKnown RBP9.19□□□□□ -0.94
VTI1A-209ENST00000496445 DGAT2L7PQ6IED9 249 aa9.19□□□□□ -0.94
VTI1A-209ENST00000496445 TRAV8-4A0A0B4J246 113 aa9.18□□□□□ -0.94
VTI1A-209ENST00000496445 A6NJY4 79 aa9.18□□□□□ -0.94
VTI1A-209ENST00000496445 KRTAP29-1A8MX34 341 aaPredicted RBP9.18□□□□□ -0.94
VTI1A-209ENST00000496445 UBE2L6O14933 153 aa9.18□□□□□ -0.94
VTI1A-209ENST00000496445 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.18□□□□□ -0.94
VTI1A-209ENST00000496445 CEBPGP53567 150 aa9.17□□□□□ -0.94
VTI1A-209ENST00000496445 CNBPP62633 177 aaKnown RBP9.17□□□□□ -0.94
VTI1A-209ENST00000496445 CT83Q5H943 113 aa9.17□□□□□ -0.94
VTI1A-209ENST00000496445 hDV102S1A0JD36 115 aa9.16□□□□□ -0.94
VTI1A-209ENST00000496445 CLRN3Q8NCR9 226 aa9.16□□□□□ -0.94
VTI1A-209ENST00000496445 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.15□□□□□ -0.94
VTI1A-209ENST00000496445 IGKV2-29A2NJV5 120 aaPredicted RBP9.15□□□□□ -0.94
VTI1A-209ENST00000496445 SDHAF1A6NFY7 115 aa9.15□□□□□ -0.94
VTI1A-209ENST00000496445 A8MWL6 223 aa9.15□□□□□ -0.94
VTI1A-209ENST00000496445 GAS8-AS1O95177 125 aa9.15□□□□□ -0.94
VTI1A-209ENST00000496445 SLPIP03973 132 aa9.15□□□□□ -0.94
VTI1A-209ENST00000496445 SDIM1Q6ZPB5 146 aa9.15□□□□□ -0.94
VTI1A-209ENST00000496445 LINC01551Q86U37 167 aa9.15□□□□□ -0.94
VTI1A-209ENST00000496445 NDUFS6O75380 124 aaKnown RBP9.14□□□□□ -0.95
VTI1A-209ENST00000496445 NCR2O95944 276 aa9.14□□□□□ -0.95
VTI1A-209ENST00000496445 APCSP02743 223 aa9.14□□□□□ -0.95
VTI1A-209ENST00000496445 SMIM15Q7Z3B0 74 aa9.14□□□□□ -0.95
VTI1A-209ENST00000496445 C15orf56Q8N910 161 aa9.14□□□□□ -0.95
VTI1A-209ENST00000496445 FAM210AQ96ND0 272 aa9.14□□□□□ -0.95
VTI1A-209ENST00000496445 SMIM7Q9BQ49 75 aa9.14□□□□□ -0.95
VTI1A-209ENST00000496445 IGKV3OR2-268A0A0C4DH90 116 aa9.13□□□□□ -0.95
VTI1A-209ENST00000496445 CIRBPQ14011 172 aaKnown RBP9.13□□□□□ -0.95
VTI1A-209ENST00000496445 TEX261Q6UWH6 196 aa9.13□□□□□ -0.95
VTI1A-209ENST00000496445 EIF5A2Q9GZV4 153 aaKnown RBP9.13□□□□□ -0.95
VTI1A-209ENST00000496445 TRBV6-5A0A0K0K1A5 114 aa9.12□□□□□ -0.95
VTI1A-209ENST00000496445 A0A1B0GVG6 124 aa9.12□□□□□ -0.95
VTI1A-209ENST00000496445 GAGE12HA6NDE8 117 aa9.12□□□□□ -0.95
VTI1A-209ENST00000496445 HIGD1CA8MV81 97 aa9.12□□□□□ -0.95
VTI1A-209ENST00000496445 SRP19P09132 144 aaKnown RBP9.12□□□□□ -0.95
VTI1A-209ENST00000496445 FGF6P10767 208 aa9.12□□□□□ -0.95
VTI1A-209ENST00000496445 HNRNPA3P51991 378 aaKnown RBP9.12□□□□□ -0.95
VTI1A-209ENST00000496445 RPL37AP61513 92 aaKnown RBP9.12□□□□□ -0.95
VTI1A-209ENST00000496445 TSKUQ8WUA8 353 aa9.12□□□□□ -0.95
VTI1A-209ENST00000496445 RNF185Q96GF1 192 aa9.12□□□□□ -0.95
VTI1A-209ENST00000496445 TNXBP22105 4242 aa9.12□□□□□ -0.95
VTI1A-209ENST00000496445 A0A1B0GUT8 65 aa9.11□□□□□ -0.95
VTI1A-209ENST00000496445 FAM231BA6NCW3 169 aa9.11□□□□□ -0.95
VTI1A-209ENST00000496445 H7C423 109 aa9.11□□□□□ -0.95
VTI1A-209ENST00000496445 AMMECR1LQ6DCA0 310 aa9.11□□□□□ -0.95
VTI1A-209ENST00000496445 RNASEKQ6P5S7 137 aaKnown RBP9.11□□□□□ -0.95
VTI1A-209ENST00000496445 TMEM191AQ9H0A3 160 aa9.11□□□□□ -0.95
VTI1A-209ENST00000496445 IGHV3-64A0A075B6Q5 118 aa9.1□□□□□ -0.95
VTI1A-209ENST00000496445 ZNF727A8MUV8 499 aa9.1□□□□□ -0.95
VTI1A-209ENST00000496445 I3L3M4 83 aa9.1□□□□□ -0.95
VTI1A-209ENST00000496445 TSHBP01222 138 aa9.1□□□□□ -0.95
VTI1A-209ENST00000496445 RPS10P46783 165 aaKnown RBP9.1□□□□□ -0.95
VTI1A-209ENST00000496445 CHCHD10Q8WYQ3 142 aaPredicted RBP9.1□□□□□ -0.95
VTI1A-209ENST00000496445 OSTCQ9NRP0 149 aa9.1□□□□□ -0.95
VTI1A-209ENST00000496445 AP5S1Q9NUS5 200 aa9.1□□□□□ -0.95
VTI1A-209ENST00000496445 TMEM242Q9NWH2 141 aa9.1□□□□□ -0.95
VTI1A-209ENST00000496445 V9GYV3 84 aa9.1□□□□□ -0.95
VTI1A-209ENST00000496445 CHTF8P0CG12 524 aa9.09□□□□□ -0.95
VTI1A-209ENST00000496445 ESDP10768 282 aa9.09□□□□□ -0.95
VTI1A-209ENST00000496445 SPACA4Q8TDM5 124 aa9.09□□□□□ -0.95
VTI1A-209ENST00000496445 BORCS7Q96B45 105 aa9.09□□□□□ -0.95
VTI1A-209ENST00000496445 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.08□□□□□ -0.96
VTI1A-209ENST00000496445 ZNF25P17030 456 aaPredicted RBP9.08□□□□□ -0.96
VTI1A-209ENST00000496445 RAB4AP20338 218 aa9.08□□□□□ -0.96
VTI1A-209ENST00000496445 PMCHP20382 165 aa9.08□□□□□ -0.96
VTI1A-209ENST00000496445 POLR2KP53803 58 aaKnown RBP9.08□□□□□ -0.96
VTI1A-209ENST00000496445 FOXI1Q12951 378 aa9.08□□□□□ -0.96
VTI1A-209ENST00000496445 HIGD2BQ4VC39 106 aa9.08□□□□□ -0.96
VTI1A-209ENST00000496445 AMN1Q8IY45 258 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms