RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 PKD1P98161 4303 aa13.07□□□□□ -0.32
HDAC4-212ENST00000495497 BTF3P20290 206 aaKnown RBP13.06□□□□□ -0.32
HDAC4-212ENST00000495497 AMTP48728 403 aa13.06□□□□□ -0.32
HDAC4-212ENST00000495497 POLR2KP53803 58 aaKnown RBP13.06□□□□□ -0.32
HDAC4-212ENST00000495497 ATRAIDQ6UW56 229 aa13.06□□□□□ -0.32
HDAC4-212ENST00000495497 TMEM242Q9NWH2 141 aa13.06□□□□□ -0.32
HDAC4-212ENST00000495497 KLK12Q9UKR0 248 aa13.06□□□□□ -0.32
HDAC4-212ENST00000495497 I3L3M4 83 aa13.05□□□□□ -0.32
HDAC4-212ENST00000495497 NDUFA5Q16718 116 aa13.05□□□□□ -0.32
HDAC4-212ENST00000495497 Q8N976 141 aa13.05□□□□□ -0.32
HDAC4-212ENST00000495497 TMEM243Q9BU79 118 aa13.05□□□□□ -0.32
HDAC4-212ENST00000495497 S100PP25815 95 aa13.04□□□□□ -0.32
HDAC4-212ENST00000495497 SVBPQ8N300 66 aa13.04□□□□□ -0.32
HDAC4-212ENST00000495497 CHCHD7Q9BUK0 85 aa13.04□□□□□ -0.32
HDAC4-212ENST00000495497 A0A1B0GVY2 172 aa13.03□□□□□ -0.32
HDAC4-212ENST00000495497 SNAPINO95295 136 aa13.03□□□□□ -0.32
HDAC4-212ENST00000495497 TNFRSF6BO95407 300 aa13.03□□□□□ -0.32
HDAC4-212ENST00000495497 TSHBP01222 138 aa13.03□□□□□ -0.32
HDAC4-212ENST00000495497 SUMO2P61956 95 aaKnown RBP13.03□□□□□ -0.32
HDAC4-212ENST00000495497 RBX1P62877 108 aa13.03□□□□□ -0.32
HDAC4-212ENST00000495497 NFE4Q86UQ8 179 aa13.03□□□□□ -0.32
HDAC4-212ENST00000495497 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.02□□□□□ -0.33
HDAC4-212ENST00000495497 TRAV9-1A0A075B6T8 112 aa13.02□□□□□ -0.33
HDAC4-212ENST00000495497 TRBV27A0A0K0K1C4 114 aa13.02□□□□□ -0.33
HDAC4-212ENST00000495497 IGKV2-29A2NJV5 120 aaPredicted RBP13.02□□□□□ -0.33
HDAC4-212ENST00000495497 PPP1R17O96001 155 aa13.02□□□□□ -0.33
HDAC4-212ENST00000495497 NPYP01303 97 aa13.02□□□□□ -0.33
HDAC4-212ENST00000495497 APCSP02743 223 aa13.02□□□□□ -0.33
HDAC4-212ENST00000495497 TMEM136Q6ZRR5 245 aa13.02□□□□□ -0.33
HDAC4-212ENST00000495497 TRBV24-1A0A075B6N3 115 aa13.01□□□□□ -0.33
HDAC4-212ENST00000495497 VCYO14598 125 aa13.01□□□□□ -0.33
HDAC4-212ENST00000495497 UBE2L6O14933 153 aa13.01□□□□□ -0.33
HDAC4-212ENST00000495497 ANGP03950 147 aaKnown RBP13.01□□□□□ -0.33
HDAC4-212ENST00000495497 PKIAP61925 76 aa13.01□□□□□ -0.33
HDAC4-212ENST00000495497 LAGE3Q14657 143 aa13.01□□□□□ -0.33
HDAC4-212ENST00000495497 UBE2WQ96B02 151 aa13.01□□□□□ -0.33
HDAC4-212ENST00000495497 BIRC6Q9NR09 4857 aa13.01□□□□□ -0.33
HDAC4-212ENST00000495497 ELOBQ15370 118 aa13□□□□□ -0.33
HDAC4-212ENST00000495497 ORMDL3Q8N138 153 aa13□□□□□ -0.33
HDAC4-212ENST00000495497 PRELID3AQ96N28 172 aa13□□□□□ -0.33
HDAC4-212ENST00000495497 IGLV4-60A0A075B6I1 120 aa12.99□□□□□ -0.33
HDAC4-212ENST00000495497 PPBPP02775 128 aa12.99□□□□□ -0.33
HDAC4-212ENST00000495497 ENHOQ6UWT2 76 aa12.99□□□□□ -0.33
HDAC4-212ENST00000495497 C20orf78Q9BR46 151 aa12.99□□□□□ -0.33
HDAC4-212ENST00000495497 DYNC1H1Q14204 4646 aaKnown RBP12.98□□□□□ -0.33
HDAC4-212ENST00000495497 TRAV8-3A0A0A6YYJ7 113 aa12.98□□□□□ -0.33
HDAC4-212ENST00000495497 CLPSL2Q6UWE3 100 aa12.98□□□□□ -0.33
HDAC4-212ENST00000495497 C20orf203Q8NBC4 194 aa12.98□□□□□ -0.33
HDAC4-212ENST00000495497 PSCAO43653 123 aa12.97□□□□□ -0.33
HDAC4-212ENST00000495497 ESDP10768 282 aa12.97□□□□□ -0.33
HDAC4-212ENST00000495497 FCER1GP30273 86 aa12.97□□□□□ -0.33
HDAC4-212ENST00000495497 KIAA1644Q3SXP7 199 aa12.97□□□□□ -0.33
HDAC4-212ENST00000495497 LINC00269Q8N2A0 174 aa12.97□□□□□ -0.33
HDAC4-212ENST00000495497 TGIF2-C20orf24A0A0A6YYL0 155 aa12.96□□□□□ -0.33
HDAC4-212ENST00000495497 KIR2DL4Q99706 377 aa12.96□□□□□ -0.33
HDAC4-212ENST00000495497 SMIM2Q9BVW6 85 aa12.96□□□□□ -0.33
HDAC4-212ENST00000495497 IGKV2D-24A0A075B6R9 120 aa12.95□□□□□ -0.34
HDAC4-212ENST00000495497 A0A1B0GUV1 79 aa12.95□□□□□ -0.34
HDAC4-212ENST00000495497 PHOX2AO14813 284 aa12.95□□□□□ -0.34
HDAC4-212ENST00000495497 CRPP02741 224 aa12.95□□□□□ -0.34
HDAC4-212ENST00000495497 RPL32P62910 135 aaKnown RBP12.95□□□□□ -0.34
HDAC4-212ENST00000495497 PKHD1P08F94 4074 aa12.94□□□□□ -0.34
HDAC4-212ENST00000495497 DNAH5Q8TE73 4624 aa12.94□□□□□ -0.34
HDAC4-212ENST00000495497 LOC389332A0A1B0GUA5 103 aa12.94□□□□□ -0.34
HDAC4-212ENST00000495497 FGF6P10767 208 aa12.94□□□□□ -0.34
HDAC4-212ENST00000495497 AMMECR1LQ6DCA0 310 aa12.94□□□□□ -0.34
HDAC4-212ENST00000495497 RNASEKQ6P5S7 137 aaKnown RBP12.94□□□□□ -0.34
HDAC4-212ENST00000495497 GNB1LQ9BYB4 327 aa12.94□□□□□ -0.34
HDAC4-212ENST00000495497 TCAPO15273 167 aa12.93□□□□□ -0.34
HDAC4-212ENST00000495497 HLA-DQA1P01909 254 aa12.93□□□□□ -0.34
HDAC4-212ENST00000495497 Q0VG73 95 aa12.93□□□□□ -0.34
HDAC4-212ENST00000495497 TM2D2Q9BX73 214 aa12.93□□□□□ -0.34
HDAC4-212ENST00000495497 PRR34Q9NV39 138 aa12.93□□□□□ -0.34
HDAC4-212ENST00000495497 A0A087WTM6 91 aa12.92□□□□□ -0.34
HDAC4-212ENST00000495497 H7C423 109 aa12.92□□□□□ -0.34
HDAC4-212ENST00000495497 REG3AQ06141 175 aa12.92□□□□□ -0.34
HDAC4-212ENST00000495497 MAPKAPK5-AS1Q8N8E1 139 aa12.92□□□□□ -0.34
HDAC4-212ENST00000495497 LAMTOR2Q9Y2Q5 125 aa12.92□□□□□ -0.34
HDAC4-212ENST00000495497 LRCOL1A6NCL2 159 aa12.91□□□□□ -0.34
HDAC4-212ENST00000495497 FUSP35637 526 aaKnown RBP eCLIP12.91□□□□□ -0.34
HDAC4-212ENST00000495497 RMI2Q96E14 147 aa12.91□□□□□ -0.34
HDAC4-212ENST00000495497 MAP1LC3AQ9H492 121 aa12.91□□□□□ -0.34
HDAC4-212ENST00000495497 IGKV3OR2-268A0A0C4DH90 116 aa12.9□□□□□ -0.34
HDAC4-212ENST00000495497 PRSS47A8MTI9 375 aa12.9□□□□□ -0.34
HDAC4-212ENST00000495497 KRTAP10-2P60368 255 aa12.9□□□□□ -0.34
HDAC4-212ENST00000495497 WFDC2Q14508 124 aa12.9□□□□□ -0.34
HDAC4-212ENST00000495497 COX19Q49B96 90 aa12.9□□□□□ -0.34
HDAC4-212ENST00000495497 SPATA12Q7Z6I5 190 aa12.9□□□□□ -0.34
HDAC4-212ENST00000495497 MRPL18Q9H0U6 180 aaKnown RBP12.9□□□□□ -0.34
HDAC4-212ENST00000495497 IGLV10-54A0A075B6I4 117 aa12.89□□□□□ -0.35
HDAC4-212ENST00000495497 LECT2O14960 151 aa12.89□□□□□ -0.35
HDAC4-212ENST00000495497 FABP9Q0Z7S8 132 aa12.89□□□□□ -0.35
HDAC4-212ENST00000495497 MIAQ16674 131 aa12.89□□□□□ -0.35
HDAC4-212ENST00000495497 CBLN2Q8IUK8 224 aa12.89□□□□□ -0.35
HDAC4-212ENST00000495497 C1orf43Q9BWL3 253 aa12.89□□□□□ -0.35
HDAC4-212ENST00000495497 BAALCQ8WXS3 180 aa12.88□□□□□ -0.35
HDAC4-212ENST00000495497 TMEM101Q96IK0 257 aa12.88□□□□□ -0.35
HDAC4-212ENST00000495497 YPEL4Q96NS1 127 aa12.88□□□□□ -0.35
HDAC4-212ENST00000495497 COX11Q9Y6N1 276 aa12.88□□□□□ -0.35
HDAC4-212ENST00000495497 EREGO14944 169 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms