RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 BIN3Q9NQY0 253 aa14.83□□□□□ -0.04
COL27A1-208ENST00000494780 UBE2L6O14933 153 aa14.82□□□□□ -0.04
COL27A1-208ENST00000494780 PDE6DO43924 150 aa14.82□□□□□ -0.04
COL27A1-208ENST00000494780 MEF2BQ02080 365 aaPredicted RBP14.82□□□□□ -0.04
COL27A1-208ENST00000494780 WDR73Q6P4I2 378 aa14.82□□□□□ -0.04
COL27A1-208ENST00000494780 NTF3P20783 257 aa14.81□□□□□ -0.04
COL27A1-208ENST00000494780 COTL1Q14019 142 aa14.81□□□□□ -0.04
COL27A1-208ENST00000494780 EIF5AL1Q6IS14 154 aaKnown RBP14.81□□□□□ -0.04
COL27A1-208ENST00000494780 RNF185Q96GF1 192 aa14.81□□□□□ -0.04
COL27A1-208ENST00000494780 SLPIP03973 132 aa14.8□□□□□ -0.04
COL27A1-208ENST00000494780 AMTP48728 403 aa14.8□□□□□ -0.04
COL27A1-208ENST00000494780 Q6ZRU5 148 aa14.8□□□□□ -0.04
COL27A1-208ENST00000494780 C9orf62Q8N4C0 152 aa14.8□□□□□ -0.04
COL27A1-208ENST00000494780 MED9Q9NWA0 146 aa14.8□□□□□ -0.04
COL27A1-208ENST00000494780 TRBV20OR9-2A0A075B6H5 130 aa14.79□□□□□ -0.04
COL27A1-208ENST00000494780 DPH3Q96FX2 82 aa14.79□□□□□ -0.04
COL27A1-208ENST00000494780 CTRLP40313 264 aa14.78□□□□□ -0.04
COL27A1-208ENST00000494780 SULT1A2P50226 295 aa14.78□□□□□ -0.04
COL27A1-208ENST00000494780 A0A087WYN8 130 aa14.77□□□□□ -0.05
COL27A1-208ENST00000494780 NUDT10Q8NFP7 164 aa14.77□□□□□ -0.05
COL27A1-208ENST00000494780 SPACA4Q8TDM5 124 aa14.77□□□□□ -0.05
COL27A1-208ENST00000494780 NUDT11Q96G61 164 aa14.77□□□□□ -0.05
COL27A1-208ENST00000494780 CNFNQ9BYD5 112 aa14.77□□□□□ -0.05
COL27A1-208ENST00000494780 CHTF8P0CG12 524 aa14.76□□□□□ -0.05
COL27A1-208ENST00000494780 TWIST1Q15672 202 aa14.76□□□□□ -0.05
COL27A1-208ENST00000494780 CFAP161Q6P656 301 aa14.76□□□□□ -0.05
COL27A1-208ENST00000494780 MT1HL1P0DM35 61 aa14.75□□□□□ -0.05
COL27A1-208ENST00000494780 BCL2P10415 239 aa14.75□□□□□ -0.05
COL27A1-208ENST00000494780 GAGE12HA6NDE8 117 aa14.74□□□□□ -0.05
COL27A1-208ENST00000494780 C15orf56Q8N910 161 aa14.74□□□□□ -0.05
COL27A1-208ENST00000494780 GATD1Q8NB37 220 aa14.74□□□□□ -0.05
COL27A1-208ENST00000494780 PLAC8Q9NZF1 115 aa14.73□□□□□ -0.05
COL27A1-208ENST00000494780 RPP21Q9H633 154 aaKnown RBP14.72□□□□□ -0.05
COL27A1-208ENST00000494780 NCR2O95944 276 aa14.71□□□□□ -0.05
COL27A1-208ENST00000494780 TAGLN2P37802 199 aaKnown RBP14.71□□□□□ -0.05
COL27A1-208ENST00000494780 TRAV26-2A0A0B4J265 109 aa14.7□□□□□ -0.06
COL27A1-208ENST00000494780 IGKV3OR2-268A0A0C4DH90 116 aa14.7□□□□□ -0.06
COL27A1-208ENST00000494780 H7C423 109 aa14.7□□□□□ -0.06
COL27A1-208ENST00000494780 RPS10P46783 165 aaKnown RBP14.7□□□□□ -0.06
COL27A1-208ENST00000494780 AMMECR1LQ6DCA0 310 aa14.7□□□□□ -0.06
COL27A1-208ENST00000494780 RNASE7Q9H1E1 156 aaKnown RBP14.7□□□□□ -0.06
COL27A1-208ENST00000494780 Q6ZNX1 250 aa14.69□□□□□ -0.06
COL27A1-208ENST00000494780 C7orf33Q8WU49 177 aa14.69□□□□□ -0.06
COL27A1-208ENST00000494780 UBR4Q5T4S7 5183 aa14.68□□□□□ -0.06
COL27A1-208ENST00000494780 COX6A2Q02221 97 aa14.68□□□□□ -0.06
COL27A1-208ENST00000494780 SMIM15Q7Z3B0 74 aa14.68□□□□□ -0.06
COL27A1-208ENST00000494780 CHCHD10Q8WYQ3 142 aaPredicted RBP14.68□□□□□ -0.06
COL27A1-208ENST00000494780 K7EN84 100 aa14.67□□□□□ -0.06
COL27A1-208ENST00000494780 NDUFS6O75380 124 aaKnown RBP14.67□□□□□ -0.06
COL27A1-208ENST00000494780 HIGD2BQ4VC39 106 aa14.67□□□□□ -0.06
COL27A1-208ENST00000494780 RNASEKQ6P5S7 137 aaKnown RBP14.67□□□□□ -0.06
COL27A1-208ENST00000494780 TEX261Q6UWH6 196 aa14.67□□□□□ -0.06
COL27A1-208ENST00000494780 OCC1Q8TAD7 63 aa14.67□□□□□ -0.06
COL27A1-208ENST00000494780 RPL39LQ96EH5 51 aaKnown RBP14.67□□□□□ -0.06
COL27A1-208ENST00000494780 PHOX2AO14813 284 aa14.66□□□□□ -0.06
COL27A1-208ENST00000494780 APCSP02743 223 aa14.66□□□□□ -0.06
COL27A1-208ENST00000494780 SLC51BQ86UW2 128 aa14.66□□□□□ -0.06
COL27A1-208ENST00000494780 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.65□□□□□ -0.06
COL27A1-208ENST00000494780 GVQW2A0A096LPI5 108 aaPredicted RBP14.65□□□□□ -0.06
COL27A1-208ENST00000494780 IGKV2-29A2NJV5 120 aaPredicted RBP14.65□□□□□ -0.06
COL27A1-208ENST00000494780 FGF6P10767 208 aa14.65□□□□□ -0.06
COL27A1-208ENST00000494780 PRSS3P2Q8NHM4 247 aa14.65□□□□□ -0.06
COL27A1-208ENST00000494780 GTSF1Q8WW33 167 aa14.65□□□□□ -0.06
COL27A1-208ENST00000494780 SDHAF1A6NFY7 115 aa14.64□□□□□ -0.07
COL27A1-208ENST00000494780 MAJINQ3KP22 176 aa14.64□□□□□ -0.07
COL27A1-208ENST00000494780 ZNF25P17030 456 aaPredicted RBP14.63□□□□□ -0.07
COL27A1-208ENST00000494780 FOXA3P55318 350 aaPredicted RBP14.63□□□□□ -0.07
COL27A1-208ENST00000494780 IGKV2-24A0A0C4DH68 120 aa14.62□□□□□ -0.07
COL27A1-208ENST00000494780 FOXI1Q12951 378 aa14.62□□□□□ -0.07
COL27A1-208ENST00000494780 TCTE3Q8IZS6 198 aa14.62□□□□□ -0.07
COL27A1-208ENST00000494780 I3L3M4 83 aa14.61□□□□□ -0.07
COL27A1-208ENST00000494780 STPG4Q8N801 248 aa14.61□□□□□ -0.07
COL27A1-208ENST00000494780 OR5A1Q8NGJ0 315 aa14.61□□□□□ -0.07
COL27A1-208ENST00000494780 TRBV6-5A0A0K0K1A5 114 aa14.6□□□□□ -0.07
COL27A1-208ENST00000494780 GATCO43716 136 aaKnown RBP14.6□□□□□ -0.07
COL27A1-208ENST00000494780 BTF3L4Q96K17 158 aa14.6□□□□□ -0.07
COL27A1-208ENST00000494780 FAM231BA6NCW3 169 aa14.59□□□□□ -0.07
COL27A1-208ENST00000494780 PMCHP20382 165 aa14.59□□□□□ -0.07
COL27A1-208ENST00000494780 FAM231DQ6ZW35 169 aa14.59□□□□□ -0.07
COL27A1-208ENST00000494780 TMEM101Q96IK0 257 aa14.59□□□□□ -0.07
COL27A1-208ENST00000494780 PKIGQ9Y2B9 76 aa14.59□□□□□ -0.07
COL27A1-208ENST00000494780 A8MWL6 223 aa14.58□□□□□ -0.08
COL27A1-208ENST00000494780 TMEM250H0YL14 139 aa14.58□□□□□ -0.08
COL27A1-208ENST00000494780 PRR3P79522 188 aaKnown RBP14.58□□□□□ -0.08
COL27A1-208ENST00000494780 FAM210AQ96ND0 272 aa14.58□□□□□ -0.08
COL27A1-208ENST00000494780 A0A096LNI7 61 aa14.57□□□□□ -0.08
COL27A1-208ENST00000494780 XCL1P47992 114 aa14.57□□□□□ -0.08
COL27A1-208ENST00000494780 LINC00474Q9P2X8 69 aa14.57□□□□□ -0.08
COL27A1-208ENST00000494780 IGHV1-58A0A0C4DH39 117 aa14.56□□□□□ -0.08
COL27A1-208ENST00000494780 LINC00959A0A1B0GUT2 108 aa14.56□□□□□ -0.08
COL27A1-208ENST00000494780 ESDP10768 282 aa14.56□□□□□ -0.08
COL27A1-208ENST00000494780 CT83Q5H943 113 aa14.56□□□□□ -0.08
COL27A1-208ENST00000494780 CCL25O15444 150 aa14.55□□□□□ -0.08
COL27A1-208ENST00000494780 LYPD6BQ8NI32 183 aa14.55□□□□□ -0.08
COL27A1-208ENST00000494780 LINC01600Q96MT4 127 aa14.55□□□□□ -0.08
COL27A1-208ENST00000494780 ST20Q9HBF5 79 aa14.55□□□□□ -0.08
COL27A1-208ENST00000494780 TSHBP01222 138 aa14.54□□□□□ -0.08
COL27A1-208ENST00000494780 BORCS7Q96B45 105 aa14.54□□□□□ -0.08
COL27A1-208ENST00000494780 MRAP2Q96G30 205 aa14.54□□□□□ -0.08
COL27A1-208ENST00000494780 TMEM242Q9NWH2 141 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms