RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 IGHV1-24A0A0C4DH33 117 aa5.55□□□□□ -1.52
LRCH3-219ENST00000494069 XKRY2A2RUG3 117 aa5.55□□□□□ -1.52
LRCH3-219ENST00000494069 USP17L23D6RBM5 183 aa5.55□□□□□ -1.52
LRCH3-219ENST00000494069 F2Z2F3 143 aa5.55□□□□□ -1.52
LRCH3-219ENST00000494069 HLA-DQA1P01909 254 aa5.55□□□□□ -1.52
LRCH3-219ENST00000494069 CRPP02741 224 aa5.55□□□□□ -1.52
LRCH3-219ENST00000494069 CTRLP40313 264 aa5.55□□□□□ -1.52
LRCH3-219ENST00000494069 IQCJQ1A5X6 159 aa5.55□□□□□ -1.52
LRCH3-219ENST00000494069 RASL11AQ6T310 242 aa5.55□□□□□ -1.52
LRCH3-219ENST00000494069 SCXQ7RTU7 201 aa5.55□□□□□ -1.52
LRCH3-219ENST00000494069 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.55□□□□□ -1.52
LRCH3-219ENST00000494069 C20orf203Q8NBC4 194 aa5.55□□□□□ -1.52
LRCH3-219ENST00000494069 GTSF1Q8WW33 167 aa5.55□□□□□ -1.52
LRCH3-219ENST00000494069 GFRA4Q9GZZ7 299 aa5.55□□□□□ -1.52
LRCH3-219ENST00000494069 DPH3P1Q9H4G8 78 aa5.55□□□□□ -1.52
LRCH3-219ENST00000494069 RPP21Q9H633 154 aaKnown RBP5.55□□□□□ -1.52
LRCH3-219ENST00000494069 PRR34Q9NV39 138 aa5.55□□□□□ -1.52
LRCH3-219ENST00000494069 LRP1Q07954 4544 aaKnown RBP5.55□□□□□ -1.52
LRCH3-219ENST00000494069 IGLV10-54A0A075B6I4 117 aa5.54□□□□□ -1.52
LRCH3-219ENST00000494069 TRAV26-2A0A0B4J265 109 aa5.54□□□□□ -1.52
LRCH3-219ENST00000494069 H7C1H1 209 aa5.54□□□□□ -1.52
LRCH3-219ENST00000494069 PRSS1P07477 247 aa5.54□□□□□ -1.52
LRCH3-219ENST00000494069 TRGC1P0CF51 173 aa5.54□□□□□ -1.52
LRCH3-219ENST00000494069 TWIST1Q15672 202 aa5.54□□□□□ -1.52
LRCH3-219ENST00000494069 TMEM97Q5BJF2 176 aa5.54□□□□□ -1.52
LRCH3-219ENST00000494069 GATD1Q8NB37 220 aa5.54□□□□□ -1.52
LRCH3-219ENST00000494069 BIN3Q9NQY0 253 aa5.54□□□□□ -1.52
LRCH3-219ENST00000494069 PKHD1L1Q86WI1 4243 aa5.54□□□□□ -1.52
LRCH3-219ENST00000494069 A0A1B0GVG6 124 aa5.53□□□□□ -1.52
LRCH3-219ENST00000494069 CEBPGP53567 150 aa5.53□□□□□ -1.52
LRCH3-219ENST00000494069 MIAQ16674 131 aa5.53□□□□□ -1.52
LRCH3-219ENST00000494069 WDR73Q6P4I2 378 aa5.53□□□□□ -1.52
LRCH3-219ENST00000494069 LYPD6BQ8NI32 183 aa5.53□□□□□ -1.52
LRCH3-219ENST00000494069 TMEM243Q9BU79 118 aa5.53□□□□□ -1.52
LRCH3-219ENST00000494069 CHAC1Q9BUX1 264 aa5.53□□□□□ -1.52
LRCH3-219ENST00000494069 CNFNQ9BYD5 112 aa5.53□□□□□ -1.52
LRCH3-219ENST00000494069 NIT2Q9NQR4 276 aa5.53□□□□□ -1.52
LRCH3-219ENST00000494069 GATCO43716 136 aaKnown RBP5.52□□□□□ -1.53
LRCH3-219ENST00000494069 GAS8-AS1O95177 125 aa5.52□□□□□ -1.53
LRCH3-219ENST00000494069 TAGLN2P37802 199 aaKnown RBP5.52□□□□□ -1.53
LRCH3-219ENST00000494069 PKIAP61925 76 aa5.52□□□□□ -1.53
LRCH3-219ENST00000494069 BLOC1S1P78537 153 aa5.52□□□□□ -1.53
LRCH3-219ENST00000494069 REG3AQ06141 175 aa5.52□□□□□ -1.53
LRCH3-219ENST00000494069 CIRBP-AS1Q8TBR5 109 aa5.52□□□□□ -1.53
LRCH3-219ENST00000494069 RPL39LQ96EH5 51 aaKnown RBP5.52□□□□□ -1.53
LRCH3-219ENST00000494069 PGLYRP4Q96LB8 373 aa5.52□□□□□ -1.53
LRCH3-219ENST00000494069 CDIP1Q9H305 208 aa5.52□□□□□ -1.53
LRCH3-219ENST00000494069 DMBT1Q9UGM3 2413 aaPredicted RBP5.52□□□□□ -1.53
LRCH3-219ENST00000494069 TMEM250H0YL14 139 aa5.51□□□□□ -1.53
LRCH3-219ENST00000494069 PANO1I0J062 215 aa5.51□□□□□ -1.53
LRCH3-219ENST00000494069 AMTP48728 403 aa5.51□□□□□ -1.53
LRCH3-219ENST00000494069 KRTAP10-4P60372 401 aaPredicted RBP5.51□□□□□ -1.53
LRCH3-219ENST00000494069 C14orf177Q52M58 125 aa5.51□□□□□ -1.53
LRCH3-219ENST00000494069 A0A1B0GUV1 79 aa5.5□□□□□ -1.53
LRCH3-219ENST00000494069 PLA2G1BP04054 148 aaKnown RBP5.5□□□□□ -1.53
LRCH3-219ENST00000494069 COTL1Q14019 142 aa5.5□□□□□ -1.53
LRCH3-219ENST00000494069 FAM231DQ6ZW35 169 aa5.5□□□□□ -1.53
LRCH3-219ENST00000494069 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.49□□□□□ -1.53
LRCH3-219ENST00000494069 IGKV3OR2-268A0A0C4DH90 116 aa5.49□□□□□ -1.53
LRCH3-219ENST00000494069 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
LRCH3-219ENST00000494069 IGKV2-29A2NJV5 120 aaPredicted RBP5.49□□□□□ -1.53
LRCH3-219ENST00000494069 A8MWL6 223 aa5.49□□□□□ -1.53
LRCH3-219ENST00000494069 UBE2L6O14933 153 aa5.49□□□□□ -1.53
LRCH3-219ENST00000494069 SLPIP03973 132 aa5.49□□□□□ -1.53
LRCH3-219ENST00000494069 SRP19P09132 144 aaKnown RBP5.49□□□□□ -1.53
LRCH3-219ENST00000494069 LINC01551Q86U37 167 aa5.49□□□□□ -1.53
LRCH3-219ENST00000494069 C9orf163Q8N9P6 203 aa5.49□□□□□ -1.53
LRCH3-219ENST00000494069 CLRN3Q8NCR9 226 aa5.49□□□□□ -1.53
LRCH3-219ENST00000494069 EIF5A2Q9GZV4 153 aaKnown RBP5.49□□□□□ -1.53
LRCH3-219ENST00000494069 HMCN2Q8NDA2 5059 aa5.48□□□□□ -1.53
LRCH3-219ENST00000494069 hDV102S1A0JD36 115 aa5.48□□□□□ -1.53
LRCH3-219ENST00000494069 GAGE12HA6NDE8 117 aa5.48□□□□□ -1.53
LRCH3-219ENST00000494069 ZNF727A8MUV8 499 aa5.48□□□□□ -1.53
LRCH3-219ENST00000494069 C9JQL5 133 aa5.48□□□□□ -1.53
LRCH3-219ENST00000494069 ZNF561-AS1K7EIQ3 104 aa5.48□□□□□ -1.53
LRCH3-219ENST00000494069 DGAT2L7PQ6IED9 249 aa5.48□□□□□ -1.53
LRCH3-219ENST00000494069 SDIM1Q6ZPB5 146 aa5.48□□□□□ -1.53
LRCH3-219ENST00000494069 RNF185Q96GF1 192 aa5.48□□□□□ -1.53
LRCH3-219ENST00000494069 FAM210AQ96ND0 272 aa5.48□□□□□ -1.53
LRCH3-219ENST00000494069 SMIM7Q9BQ49 75 aa5.48□□□□□ -1.53
LRCH3-219ENST00000494069 TRAV8-4A0A0B4J246 113 aa5.47□□□□□ -1.53
LRCH3-219ENST00000494069 FAM231BA6NCW3 169 aa5.47□□□□□ -1.53
LRCH3-219ENST00000494069 SDHAF1A6NFY7 115 aa5.47□□□□□ -1.53
LRCH3-219ENST00000494069 HIGD1CA8MV81 97 aa5.47□□□□□ -1.53
LRCH3-219ENST00000494069 RPS10P46783 165 aaKnown RBP5.47□□□□□ -1.53
LRCH3-219ENST00000494069 SRSF3P84103 164 aaKnown RBP5.47□□□□□ -1.53
LRCH3-219ENST00000494069 CT83Q5H943 113 aa5.47□□□□□ -1.53
LRCH3-219ENST00000494069 SMIM15Q7Z3B0 74 aa5.47□□□□□ -1.53
LRCH3-219ENST00000494069 TSKUQ8WUA8 353 aa5.47□□□□□ -1.53
LRCH3-219ENST00000494069 TRBV6-5A0A0K0K1A5 114 aa5.46□□□□□ -1.54
LRCH3-219ENST00000494069 SMKR1H3BMG3 65 aa5.46□□□□□ -1.54
LRCH3-219ENST00000494069 CHTF8P0CG12 524 aa5.46□□□□□ -1.54
LRCH3-219ENST00000494069 FGF6P10767 208 aa5.46□□□□□ -1.54
LRCH3-219ENST00000494069 PMCHP20382 165 aa5.46□□□□□ -1.54
LRCH3-219ENST00000494069 HNRNPA3P51991 378 aaKnown RBP5.46□□□□□ -1.54
LRCH3-219ENST00000494069 RNASEKQ6P5S7 137 aaKnown RBP5.46□□□□□ -1.54
LRCH3-219ENST00000494069 AMN1Q8IY45 258 aa5.46□□□□□ -1.54
LRCH3-219ENST00000494069 C15orf56Q8N910 161 aa5.46□□□□□ -1.54
LRCH3-219ENST00000494069 OSTCQ9NRP0 149 aa5.46□□□□□ -1.54
LRCH3-219ENST00000494069 V9GYV3 84 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms