RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 PRSS47A8MTI9 375 aa10.75□□□□□ -0.69
TRA2A-208ENST00000490942 SMKR1H3BMG3 65 aa10.75□□□□□ -0.69
TRA2A-208ENST00000490942 H7C423 109 aa10.75□□□□□ -0.69
TRA2A-208ENST00000490942 LAGE3Q14657 143 aa10.75□□□□□ -0.69
TRA2A-208ENST00000490942 KMT2AQ03164 3969 aa10.75□□□□□ -0.69
TRA2A-208ENST00000490942 PMCHP20382 165 aa10.74□□□□□ -0.69
TRA2A-208ENST00000490942 ATRAIDQ6UW56 229 aa10.74□□□□□ -0.69
TRA2A-208ENST00000490942 PRELID3AQ96N28 172 aa10.74□□□□□ -0.69
TRA2A-208ENST00000490942 YPEL4Q96NS1 127 aa10.74□□□□□ -0.69
TRA2A-208ENST00000490942 KIR2DL4Q99706 377 aa10.74□□□□□ -0.69
TRA2A-208ENST00000490942 TMEM243Q9BU79 118 aa10.74□□□□□ -0.69
TRA2A-208ENST00000490942 A0A087WX48 190 aa10.73□□□□□ -0.69
TRA2A-208ENST00000490942 IBA57-AS1B1ANH7 110 aa10.73□□□□□ -0.69
TRA2A-208ENST00000490942 APCSP02743 223 aa10.73□□□□□ -0.69
TRA2A-208ENST00000490942 AMTP48728 403 aa10.73□□□□□ -0.69
TRA2A-208ENST00000490942 CHCHD5Q9BSY4 110 aa10.73□□□□□ -0.69
TRA2A-208ENST00000490942 KRTAP1-5Q9BYS1 174 aa10.73□□□□□ -0.69
TRA2A-208ENST00000490942 RYR3Q15413 4870 aa10.72□□□□□ -0.69
TRA2A-208ENST00000490942 TGIF2-C20orf24A0A0A6YYL0 155 aa10.72□□□□□ -0.69
TRA2A-208ENST00000490942 A0A1B0GUV1 79 aa10.72□□□□□ -0.69
TRA2A-208ENST00000490942 M0R2N4 97 aa10.72□□□□□ -0.69
TRA2A-208ENST00000490942 NPYP01303 97 aa10.72□□□□□ -0.69
TRA2A-208ENST00000490942 C1orf134Q5TEV5 83 aa10.72□□□□□ -0.69
TRA2A-208ENST00000490942 NFE4Q86UQ8 179 aa10.72□□□□□ -0.69
TRA2A-208ENST00000490942 C6orf223Q8N319 242 aa10.72□□□□□ -0.69
TRA2A-208ENST00000490942 SMIM2Q9BVW6 85 aa10.72□□□□□ -0.69
TRA2A-208ENST00000490942 HYDINQ4G0P3 5121 aa10.72□□□□□ -0.69
TRA2A-208ENST00000490942 TSHBP01222 138 aa10.71□□□□□ -0.69
TRA2A-208ENST00000490942 ESDP10768 282 aa10.71□□□□□ -0.69
TRA2A-208ENST00000490942 TMEM262E9PQX1 116 aa10.7□□□□□ -0.7
TRA2A-208ENST00000490942 K7EMI3 77 aa10.7□□□□□ -0.7
TRA2A-208ENST00000490942 MAP1LC3AQ9H492 121 aa10.7□□□□□ -0.7
TRA2A-208ENST00000490942 UBE2L6O14933 153 aa10.69□□□□□ -0.7
TRA2A-208ENST00000490942 IGHV3-30P01768 117 aa10.69□□□□□ -0.7
TRA2A-208ENST00000490942 IGHV3-33P01772 117 aa10.69□□□□□ -0.7
TRA2A-208ENST00000490942 IGHV3-30-3P0DP02 117 aa10.69□□□□□ -0.7
TRA2A-208ENST00000490942 IGHV3-30-5P0DP03 117 aa10.69□□□□□ -0.7
TRA2A-208ENST00000490942 FCER1GP30273 86 aa10.69□□□□□ -0.7
TRA2A-208ENST00000490942 SMAGPQ0VAQ4 97 aa10.69□□□□□ -0.7
TRA2A-208ENST00000490942 LINC00336Q6ZUF6 198 aa10.69□□□□□ -0.7
TRA2A-208ENST00000490942 MRPL18Q9H0U6 180 aaKnown RBP10.69□□□□□ -0.7
TRA2A-208ENST00000490942 TRAV8-3A0A0A6YYJ7 113 aa10.68□□□□□ -0.7
TRA2A-208ENST00000490942 ZNF25P17030 456 aaPredicted RBP10.68□□□□□ -0.7
TRA2A-208ENST00000490942 MPV17L2Q567V2 206 aa10.68□□□□□ -0.7
TRA2A-208ENST00000490942 CBLN2Q8IUK8 224 aa10.68□□□□□ -0.7
TRA2A-208ENST00000490942 RBX1P62877 108 aa10.67□□□□□ -0.7
TRA2A-208ENST00000490942 Q0VG73 95 aa10.67□□□□□ -0.7
TRA2A-208ENST00000490942 GAGE6Q13070 117 aa10.67□□□□□ -0.7
TRA2A-208ENST00000490942 TMEM18Q96B42 140 aa10.67□□□□□ -0.7
TRA2A-208ENST00000490942 NXT2Q9NPJ8 142 aaKnown RBP10.67□□□□□ -0.7
TRA2A-208ENST00000490942 TRAPPC1Q9Y5R8 145 aa10.67□□□□□ -0.7
TRA2A-208ENST00000490942 FABP9Q0Z7S8 132 aa10.66□□□□□ -0.7
TRA2A-208ENST00000490942 MRPL52Q86TS9 123 aaKnown RBP10.66□□□□□ -0.7
TRA2A-208ENST00000490942 Q8N8P6 123 aa10.66□□□□□ -0.7
TRA2A-208ENST00000490942 ALKBH7Q9BT30 221 aaPredicted RBP10.66□□□□□ -0.7
TRA2A-208ENST00000490942 RTL8CO15255 209 aa10.65□□□□□ -0.7
TRA2A-208ENST00000490942 RAB5AP20339 215 aa10.65□□□□□ -0.7
TRA2A-208ENST00000490942 S100A1P23297 94 aa10.65□□□□□ -0.7
TRA2A-208ENST00000490942 Q8N3U1 123 aa10.65□□□□□ -0.7
TRA2A-208ENST00000490942 C20orf203Q8NBC4 194 aa10.65□□□□□ -0.7
TRA2A-208ENST00000490942 RMI2Q96E14 147 aa10.65□□□□□ -0.7
TRA2A-208ENST00000490942 PRR34Q9NV39 138 aa10.65□□□□□ -0.7
TRA2A-208ENST00000490942 KLK12Q9UKR0 248 aa10.65□□□□□ -0.7
TRA2A-208ENST00000490942 CSDC2Q9Y534 153 aaKnown RBP10.65□□□□□ -0.7
TRA2A-208ENST00000490942 COX11Q9Y6N1 276 aa10.65□□□□□ -0.7
TRA2A-208ENST00000490942 FGF6P10767 208 aa10.64□□□□□ -0.71
TRA2A-208ENST00000490942 KIAA1644Q3SXP7 199 aa10.64□□□□□ -0.71
TRA2A-208ENST00000490942 AMMECR1LQ6DCA0 310 aa10.64□□□□□ -0.71
TRA2A-208ENST00000490942 Q6ZRN7 208 aaPredicted RBP10.64□□□□□ -0.71
TRA2A-208ENST00000490942 Q8N976 141 aa10.64□□□□□ -0.71
TRA2A-208ENST00000490942 TIMM21Q9BVV7 248 aa10.64□□□□□ -0.71
TRA2A-208ENST00000490942 TM2D2Q9BX73 214 aa10.64□□□□□ -0.71
TRA2A-208ENST00000490942 CRPP02741 224 aa10.63□□□□□ -0.71
TRA2A-208ENST00000490942 ANGP03950 147 aaKnown RBP10.63□□□□□ -0.71
TRA2A-208ENST00000490942 G0S2P27469 103 aa10.63□□□□□ -0.71
TRA2A-208ENST00000490942 MIAQ16674 131 aa10.63□□□□□ -0.71
TRA2A-208ENST00000490942 ORMDL2Q53FV1 153 aa10.63□□□□□ -0.71
TRA2A-208ENST00000490942 DEFB104AQ8WTQ1 72 aa10.63□□□□□ -0.71
TRA2A-208ENST00000490942 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.62□□□□□ -0.71
TRA2A-208ENST00000490942 IGKV2-29A2NJV5 120 aaPredicted RBP10.62□□□□□ -0.71
TRA2A-208ENST00000490942 TMEM101Q96IK0 257 aa10.62□□□□□ -0.71
TRA2A-208ENST00000490942 LOC389332A0A1B0GUA5 103 aa10.61□□□□□ -0.71
TRA2A-208ENST00000490942 LINC01546A6NGU7 62 aa10.61□□□□□ -0.71
TRA2A-208ENST00000490942 COLCA2A8K830 154 aa10.61□□□□□ -0.71
TRA2A-208ENST00000490942 UBE2WQ96B02 151 aa10.61□□□□□ -0.71
TRA2A-208ENST00000490942 DNAH2Q9P225 4427 aa10.61□□□□□ -0.71
TRA2A-208ENST00000490942 IGLV4-60A0A075B6I1 120 aa10.6□□□□□ -0.71
TRA2A-208ENST00000490942 TRAV8-4A0A0B4J246 113 aa10.6□□□□□ -0.71
TRA2A-208ENST00000490942 LINC01549A6NIU2 74 aa10.6□□□□□ -0.71
TRA2A-208ENST00000490942 REG3AQ06141 175 aa10.6□□□□□ -0.71
TRA2A-208ENST00000490942 RNASEKQ6P5S7 137 aaKnown RBP10.6□□□□□ -0.71
TRA2A-208ENST00000490942 ENHOQ6UWT2 76 aa10.6□□□□□ -0.71
TRA2A-208ENST00000490942 LINC00269Q8N2A0 174 aa10.6□□□□□ -0.71
TRA2A-208ENST00000490942 OR5A1Q8NGJ0 315 aa10.6□□□□□ -0.71
TRA2A-208ENST00000490942 SPANXA1Q9NS26 97 aa10.6□□□□□ -0.71
TRA2A-208ENST00000490942 UBE2D4Q9Y2X8 147 aa10.6□□□□□ -0.71
TRA2A-208ENST00000490942 PRSS29PA6NIE9 313 aa10.59□□□□□ -0.71
TRA2A-208ENST00000490942 IFI27P40305 119 aaPredicted RBP10.59□□□□□ -0.71
TRA2A-208ENST00000490942 DGAT2L7PQ6IED9 249 aa10.59□□□□□ -0.71
TRA2A-208ENST00000490942 PRSS3P2Q8NHM4 247 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms