RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 DNAH17Q9UFH2 4485 aa7.44□□□□□ -1.22
CPSF7-212ENST00000489728 TRBV24-1A0A075B6N3 115 aa7.44□□□□□ -1.22
CPSF7-212ENST00000489728 A0A1B0GUV1 79 aa7.44□□□□□ -1.22
CPSF7-212ENST00000489728 TMEM262E9PQX1 116 aa7.44□□□□□ -1.22
CPSF7-212ENST00000489728 PHOX2AO14813 284 aa7.44□□□□□ -1.22
CPSF7-212ENST00000489728 POLR2KP53803 58 aaKnown RBP7.44□□□□□ -1.22
CPSF7-212ENST00000489728 RPL32P62910 135 aaKnown RBP7.44□□□□□ -1.22
CPSF7-212ENST00000489728 NDUFA5Q16718 116 aa7.44□□□□□ -1.22
CPSF7-212ENST00000489728 MRPL51Q4U2R6 128 aaKnown RBP7.44□□□□□ -1.22
CPSF7-212ENST00000489728 MPV17L2Q567V2 206 aa7.44□□□□□ -1.22
CPSF7-212ENST00000489728 NRACQ8N912 160 aa7.44□□□□□ -1.22
CPSF7-212ENST00000489728 C20orf78Q9BR46 151 aa7.44□□□□□ -1.22
CPSF7-212ENST00000489728 TCAPO15273 167 aa7.43□□□□□ -1.22
CPSF7-212ENST00000489728 APCSP02743 223 aa7.43□□□□□ -1.22
CPSF7-212ENST00000489728 PMCHP20382 165 aa7.43□□□□□ -1.22
CPSF7-212ENST00000489728 S100PP25815 95 aa7.43□□□□□ -1.22
CPSF7-212ENST00000489728 CKS2P33552 79 aa7.43□□□□□ -1.22
CPSF7-212ENST00000489728 RPS10P46783 165 aaKnown RBP7.43□□□□□ -1.22
CPSF7-212ENST00000489728 SUMO2P61956 95 aaKnown RBP7.43□□□□□ -1.22
CPSF7-212ENST00000489728 ATRAIDQ6UW56 229 aa7.43□□□□□ -1.22
CPSF7-212ENST00000489728 Q8N3U1 123 aa7.43□□□□□ -1.22
CPSF7-212ENST00000489728 CLRN3Q8NCR9 226 aa7.43□□□□□ -1.22
CPSF7-212ENST00000489728 LAMTOR2Q9Y2Q5 125 aa7.43□□□□□ -1.22
CPSF7-212ENST00000489728 C7orf77A4D0Y5 90 aa7.42□□□□□ -1.22
CPSF7-212ENST00000489728 VCYO14598 125 aa7.42□□□□□ -1.22
CPSF7-212ENST00000489728 UBE2L6O14933 153 aa7.42□□□□□ -1.22
CPSF7-212ENST00000489728 EREGO14944 169 aa7.42□□□□□ -1.22
CPSF7-212ENST00000489728 PSCAO43653 123 aa7.42□□□□□ -1.22
CPSF7-212ENST00000489728 RBX1P62877 108 aa7.42□□□□□ -1.22
CPSF7-212ENST00000489728 ORMDL3Q8N138 153 aa7.42□□□□□ -1.22
CPSF7-212ENST00000489728 SVBPQ8N300 66 aa7.42□□□□□ -1.22
CPSF7-212ENST00000489728 Q9HAA7 133 aa7.42□□□□□ -1.22
CPSF7-212ENST00000489728 PRR34Q9NV39 138 aa7.42□□□□□ -1.22
CPSF7-212ENST00000489728 KLK12Q9UKR0 248 aa7.42□□□□□ -1.22
CPSF7-212ENST00000489728 D6R8Y8 96 aa7.41□□□□□ -1.22
CPSF7-212ENST00000489728 GAS8-AS1O95177 125 aa7.41□□□□□ -1.22
CPSF7-212ENST00000489728 TSHBP01222 138 aa7.41□□□□□ -1.22
CPSF7-212ENST00000489728 CRPP02741 224 aa7.41□□□□□ -1.22
CPSF7-212ENST00000489728 ANGP03950 147 aaKnown RBP7.41□□□□□ -1.22
CPSF7-212ENST00000489728 ZNF25P17030 456 aaPredicted RBP7.41□□□□□ -1.22
CPSF7-212ENST00000489728 GAGE6Q13070 117 aa7.41□□□□□ -1.22
CPSF7-212ENST00000489728 MIAQ16674 131 aa7.41□□□□□ -1.22
CPSF7-212ENST00000489728 COX19Q49B96 90 aa7.41□□□□□ -1.22
CPSF7-212ENST00000489728 UBE2WQ96B02 151 aa7.41□□□□□ -1.22
CPSF7-212ENST00000489728 KIR2DL4Q99706 377 aa7.41□□□□□ -1.22
CPSF7-212ENST00000489728 SMKR1H3BMG3 65 aa7.4□□□□□ -1.22
CPSF7-212ENST00000489728 SNAPINO95295 136 aa7.4□□□□□ -1.22
CPSF7-212ENST00000489728 TNFRSF6BO95407 300 aa7.4□□□□□ -1.22
CPSF7-212ENST00000489728 ESDP10768 282 aa7.4□□□□□ -1.22
CPSF7-212ENST00000489728 SMAGPQ0VAQ4 97 aa7.4□□□□□ -1.22
CPSF7-212ENST00000489728 CDPF1Q6NVV7 123 aa7.4□□□□□ -1.22
CPSF7-212ENST00000489728 Q8N976 141 aa7.4□□□□□ -1.22
CPSF7-212ENST00000489728 BIRC6Q9NR09 4857 aa7.4□□□□□ -1.23
CPSF7-212ENST00000489728 A0A087WTM6 91 aa7.39□□□□□ -1.23
CPSF7-212ENST00000489728 PRSS47A8MTI9 375 aa7.39□□□□□ -1.23
CPSF7-212ENST00000489728 APOC3P02656 99 aa7.39□□□□□ -1.23
CPSF7-212ENST00000489728 FCER1GP30273 86 aa7.39□□□□□ -1.23
CPSF7-212ENST00000489728 ENHOQ6UWT2 76 aa7.39□□□□□ -1.23
CPSF7-212ENST00000489728 TMEM136Q6ZRR5 245 aa7.39□□□□□ -1.23
CPSF7-212ENST00000489728 MRPL52Q86TS9 123 aaKnown RBP7.39□□□□□ -1.23
CPSF7-212ENST00000489728 SMIM2Q9BVW6 85 aa7.39□□□□□ -1.23
CPSF7-212ENST00000489728 RPS10P5Q9NQ39 176 aa7.39□□□□□ -1.23
CPSF7-212ENST00000489728 TRAV8-4A0A0B4J246 113 aa7.38□□□□□ -1.23
CPSF7-212ENST00000489728 LRCOL1A6NCL2 159 aa7.38□□□□□ -1.23
CPSF7-212ENST00000489728 HLA-DQA1P01909 254 aa7.38□□□□□ -1.23
CPSF7-212ENST00000489728 MT-ND6P03923 174 aa7.38□□□□□ -1.23
CPSF7-212ENST00000489728 AMMECR1LQ6DCA0 310 aa7.38□□□□□ -1.23
CPSF7-212ENST00000489728 LINC00269Q8N2A0 174 aa7.38□□□□□ -1.23
CPSF7-212ENST00000489728 C20orf203Q8NBC4 194 aa7.38□□□□□ -1.23
CPSF7-212ENST00000489728 PRELID3AQ96N28 172 aa7.38□□□□□ -1.23
CPSF7-212ENST00000489728 C1orf43Q9BWL3 253 aa7.38□□□□□ -1.23
CPSF7-212ENST00000489728 GNB1LQ9BYB4 327 aa7.38□□□□□ -1.23
CPSF7-212ENST00000489728 PGPEP1Q9NXJ5 209 aa7.38□□□□□ -1.23
CPSF7-212ENST00000489728 PKHD1P08F94 4074 aa7.38□□□□□ -1.23
CPSF7-212ENST00000489728 PKD1P98161 4303 aa7.38□□□□□ -1.23
CPSF7-212ENST00000489728 IGKV2D-24A0A075B6R9 120 aa7.37□□□□□ -1.23
CPSF7-212ENST00000489728 NPYP01303 97 aa7.37□□□□□ -1.23
CPSF7-212ENST00000489728 FGF6P10767 208 aa7.37□□□□□ -1.23
CPSF7-212ENST00000489728 REG3AQ06141 175 aa7.37□□□□□ -1.23
CPSF7-212ENST00000489728 NTN5Q8WTR8 489 aaPredicted RBP7.37□□□□□ -1.23
CPSF7-212ENST00000489728 TMEM18Q96B42 140 aa7.37□□□□□ -1.23
CPSF7-212ENST00000489728 TMEM101Q96IK0 257 aa7.37□□□□□ -1.23
CPSF7-212ENST00000489728 CSDC2Q9Y534 153 aaKnown RBP7.37□□□□□ -1.23
CPSF7-212ENST00000489728 IGLV4-60A0A075B6I1 120 aa7.36□□□□□ -1.23
CPSF7-212ENST00000489728 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-212ENST00000489728 IGKV2-29A2NJV5 120 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-212ENST00000489728 K7EMI3 77 aa7.36□□□□□ -1.23
CPSF7-212ENST00000489728 SPATA12Q7Z6I5 190 aa7.36□□□□□ -1.23
CPSF7-212ENST00000489728 TIMM21Q9BVV7 248 aa7.36□□□□□ -1.23
CPSF7-212ENST00000489728 MAP1LC3AQ9H492 121 aa7.36□□□□□ -1.23
CPSF7-212ENST00000489728 RNASEKQ6P5S7 137 aaKnown RBP7.35□□□□□ -1.23
CPSF7-212ENST00000489728 OR5A1Q8NGJ0 315 aa7.35□□□□□ -1.23
CPSF7-212ENST00000489728 DEFB104AQ8WTQ1 72 aa7.35□□□□□ -1.23
CPSF7-212ENST00000489728 C16orf90A8MZG2 172 aa7.34□□□□□ -1.23
CPSF7-212ENST00000489728 RAB5AP20339 215 aa7.34□□□□□ -1.23
CPSF7-212ENST00000489728 C14orf177Q52M58 125 aa7.34□□□□□ -1.23
CPSF7-212ENST00000489728 Q8N814 137 aa7.34□□□□□ -1.23
CPSF7-212ENST00000489728 KRTAP10-2P60368 255 aa7.33□□□□□ -1.24
CPSF7-212ENST00000489728 KRTAP26-1Q6PEX3 210 aa7.33□□□□□ -1.24
CPSF7-212ENST00000489728 CLPSL2Q6UWE3 100 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms