RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 AP5S1Q9NUS5 200 aa12.25□□□□□ -0.45
COL27A1-205ENST00000485397 IGHV3-64A0A075B6Q5 118 aa12.24□□□□□ -0.45
COL27A1-205ENST00000485397 SMIM12Q96EX1 92 aa12.24□□□□□ -0.45
COL27A1-205ENST00000485397 DPH3Q96FX2 82 aa12.24□□□□□ -0.45
COL27A1-205ENST00000485397 MED9Q9NWA0 146 aa12.24□□□□□ -0.45
COL27A1-205ENST00000485397 UBE2L6O14933 153 aa12.23□□□□□ -0.45
COL27A1-205ENST00000485397 MT1HL1P0DM35 61 aa12.23□□□□□ -0.45
COL27A1-205ENST00000485397 AMTP48728 403 aa12.23□□□□□ -0.45
COL27A1-205ENST00000485397 MEF2BQ02080 365 aaPredicted RBP12.23□□□□□ -0.45
COL27A1-205ENST00000485397 A0A087WYN8 130 aa12.22□□□□□ -0.45
COL27A1-205ENST00000485397 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.22□□□□□ -0.45
COL27A1-205ENST00000485397 SULT1A2P50226 295 aa12.22□□□□□ -0.45
COL27A1-205ENST00000485397 COTL1Q14019 142 aa12.22□□□□□ -0.45
COL27A1-205ENST00000485397 C9orf62Q8N4C0 152 aa12.22□□□□□ -0.45
COL27A1-205ENST00000485397 NUDT10Q8NFP7 164 aa12.22□□□□□ -0.45
COL27A1-205ENST00000485397 NUDT11Q96G61 164 aa12.22□□□□□ -0.45
COL27A1-205ENST00000485397 GAGE12HA6NDE8 117 aa12.21□□□□□ -0.45
COL27A1-205ENST00000485397 TEX46H3BTG2 121 aa12.21□□□□□ -0.45
COL27A1-205ENST00000485397 PDE6DO43924 150 aa12.21□□□□□ -0.45
COL27A1-205ENST00000485397 WDR73Q6P4I2 378 aa12.21□□□□□ -0.45
COL27A1-205ENST00000485397 IGKV3OR2-268A0A0C4DH90 116 aa12.2□□□□□ -0.46
COL27A1-205ENST00000485397 CTRLP40313 264 aa12.2□□□□□ -0.46
COL27A1-205ENST00000485397 TWIST1Q15672 202 aa12.2□□□□□ -0.46
COL27A1-205ENST00000485397 Q6ZRU5 148 aa12.2□□□□□ -0.46
COL27A1-205ENST00000485397 C15orf56Q8N910 161 aa12.2□□□□□ -0.46
COL27A1-205ENST00000485397 GATD1Q8NB37 220 aa12.2□□□□□ -0.46
COL27A1-205ENST00000485397 SPACA4Q8TDM5 124 aa12.2□□□□□ -0.46
COL27A1-205ENST00000485397 BIN3Q9NQY0 253 aa12.2□□□□□ -0.46
COL27A1-205ENST00000485397 TRAV26-2A0A0B4J265 109 aa12.19□□□□□ -0.46
COL27A1-205ENST00000485397 BCL2P10415 239 aa12.19□□□□□ -0.46
COL27A1-205ENST00000485397 EIF5AL1Q6IS14 154 aaKnown RBP12.19□□□□□ -0.46
COL27A1-205ENST00000485397 RNF185Q96GF1 192 aa12.19□□□□□ -0.46
COL27A1-205ENST00000485397 HIGD2BQ4VC39 106 aa12.17□□□□□ -0.46
COL27A1-205ENST00000485397 Q6ZNX1 250 aa12.17□□□□□ -0.46
COL27A1-205ENST00000485397 CNFNQ9BYD5 112 aa12.17□□□□□ -0.46
COL27A1-205ENST00000485397 RNASE7Q9H1E1 156 aaKnown RBP12.17□□□□□ -0.46
COL27A1-205ENST00000485397 PLAC8Q9NZF1 115 aa12.17□□□□□ -0.46
COL27A1-205ENST00000485397 COX6A2Q02221 97 aa12.16□□□□□ -0.46
COL27A1-205ENST00000485397 CFAP161Q6P656 301 aa12.16□□□□□ -0.46
COL27A1-205ENST00000485397 RPL39LQ96EH5 51 aaKnown RBP12.16□□□□□ -0.46
COL27A1-205ENST00000485397 RPP21Q9H633 154 aaKnown RBP12.16□□□□□ -0.46
COL27A1-205ENST00000485397 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.15□□□□□ -0.46
COL27A1-205ENST00000485397 IGKV2-29A2NJV5 120 aaPredicted RBP12.15□□□□□ -0.46
COL27A1-205ENST00000485397 K7EN84 100 aa12.15□□□□□ -0.46
COL27A1-205ENST00000485397 PHOX2AO14813 284 aa12.15□□□□□ -0.46
COL27A1-205ENST00000485397 FOXA3P55318 350 aaPredicted RBP12.15□□□□□ -0.46
COL27A1-205ENST00000485397 OCC1Q8TAD7 63 aa12.15□□□□□ -0.46
COL27A1-205ENST00000485397 RPS10P46783 165 aaKnown RBP12.14□□□□□ -0.47
COL27A1-205ENST00000485397 AMMECR1LQ6DCA0 310 aa12.14□□□□□ -0.47
COL27A1-205ENST00000485397 PRSS3P2Q8NHM4 247 aa12.14□□□□□ -0.47
COL27A1-205ENST00000485397 CHCHD10Q8WYQ3 142 aaPredicted RBP12.14□□□□□ -0.47
COL27A1-205ENST00000485397 RNASEKQ6P5S7 137 aaKnown RBP12.13□□□□□ -0.47
COL27A1-205ENST00000485397 GTSF1Q8WW33 167 aa12.13□□□□□ -0.47
COL27A1-205ENST00000485397 IGKV2-24A0A0C4DH68 120 aa12.12□□□□□ -0.47
COL27A1-205ENST00000485397 MAJINQ3KP22 176 aa12.12□□□□□ -0.47
COL27A1-205ENST00000485397 NDUFS6O75380 124 aaKnown RBP12.11□□□□□ -0.47
COL27A1-205ENST00000485397 NCR2O95944 276 aa12.11□□□□□ -0.47
COL27A1-205ENST00000485397 APCSP02743 223 aa12.11□□□□□ -0.47
COL27A1-205ENST00000485397 FGF6P10767 208 aa12.11□□□□□ -0.47
COL27A1-205ENST00000485397 C7orf33Q8WU49 177 aa12.11□□□□□ -0.47
COL27A1-205ENST00000485397 GVQW2A0A096LPI5 108 aaPredicted RBP12.1□□□□□ -0.47
COL27A1-205ENST00000485397 SDHAF1A6NFY7 115 aa12.1□□□□□ -0.47
COL27A1-205ENST00000485397 SLC51BQ86UW2 128 aa12.1□□□□□ -0.47
COL27A1-205ENST00000485397 TNXBP22105 4242 aa12.1□□□□□ -0.47
COL27A1-205ENST00000485397 H7C423 109 aa12.09□□□□□ -0.47
COL27A1-205ENST00000485397 TAGLN2P37802 199 aaKnown RBP12.09□□□□□ -0.47
COL27A1-205ENST00000485397 FOXI1Q12951 378 aa12.09□□□□□ -0.47
COL27A1-205ENST00000485397 SMIM15Q7Z3B0 74 aa12.09□□□□□ -0.47
COL27A1-205ENST00000485397 FAM231BA6NCW3 169 aa12.08□□□□□ -0.48
COL27A1-205ENST00000485397 STPG4Q8N801 248 aa12.08□□□□□ -0.48
COL27A1-205ENST00000485397 LYPD6BQ8NI32 183 aa12.08□□□□□ -0.48
COL27A1-205ENST00000485397 A0A096LNI7 61 aa12.07□□□□□ -0.48
COL27A1-205ENST00000485397 GATCO43716 136 aaKnown RBP12.07□□□□□ -0.48
COL27A1-205ENST00000485397 GAS8-AS1O95177 125 aa12.07□□□□□ -0.48
COL27A1-205ENST00000485397 PMCHP20382 165 aa12.07□□□□□ -0.48
COL27A1-205ENST00000485397 TCTE3Q8IZS6 198 aa12.07□□□□□ -0.48
COL27A1-205ENST00000485397 I3L3M4 83 aa12.06□□□□□ -0.48
COL27A1-205ENST00000485397 XCL1P47992 114 aa12.06□□□□□ -0.48
COL27A1-205ENST00000485397 TEX261Q6UWH6 196 aa12.06□□□□□ -0.48
COL27A1-205ENST00000485397 OR5A1Q8NGJ0 315 aa12.06□□□□□ -0.48
COL27A1-205ENST00000485397 LINC00526Q96FQ7 95 aa12.06□□□□□ -0.48
COL27A1-205ENST00000485397 hCG_2014768A0A024R1R8 64 aa12.05□□□□□ -0.48
COL27A1-205ENST00000485397 PRR3P79522 188 aaKnown RBP12.05□□□□□ -0.48
COL27A1-205ENST00000485397 TRBV6-5A0A0K0K1A5 114 aa12.04□□□□□ -0.48
COL27A1-205ENST00000485397 LINC00959A0A1B0GUT2 108 aa12.04□□□□□ -0.48
COL27A1-205ENST00000485397 CCL25O15444 150 aa12.04□□□□□ -0.48
COL27A1-205ENST00000485397 ESDP10768 282 aa12.04□□□□□ -0.48
COL27A1-205ENST00000485397 ZNF25P17030 456 aaPredicted RBP12.04□□□□□ -0.48
COL27A1-205ENST00000485397 AKAP14Q86UN6 197 aa12.04□□□□□ -0.48
COL27A1-205ENST00000485397 BTF3L4Q96K17 158 aa12.04□□□□□ -0.48
COL27A1-205ENST00000485397 A8MWL6 223 aa12.03□□□□□ -0.48
COL27A1-205ENST00000485397 TSHBP01222 138 aa12.03□□□□□ -0.48
COL27A1-205ENST00000485397 FAM231DQ6ZW35 169 aa12.03□□□□□ -0.48
COL27A1-205ENST00000485397 TMEM101Q96IK0 257 aa12.03□□□□□ -0.48
COL27A1-205ENST00000485397 TMEM242Q9NWH2 141 aa12.03□□□□□ -0.48
COL27A1-205ENST00000485397 TMEM250H0YL14 139 aa12.02□□□□□ -0.49
COL27A1-205ENST00000485397 LINC01600Q96MT4 127 aa12.02□□□□□ -0.49
COL27A1-205ENST00000485397 IGHV1-58A0A0C4DH39 117 aa12.01□□□□□ -0.49
COL27A1-205ENST00000485397 CEBPGP53567 150 aa12.01□□□□□ -0.49
COL27A1-205ENST00000485397 ODF1Q14990 250 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms