RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 NTF3P20783 257 aa12.53□□□□□ -0.4
R3HDM1-215ENST00000483021 TAGLN2P37802 199 aaKnown RBP12.53□□□□□ -0.4
R3HDM1-215ENST00000483021 CTRLP40313 264 aa12.53□□□□□ -0.4
R3HDM1-215ENST00000483021 C9orf62Q8N4C0 152 aa12.53□□□□□ -0.4
R3HDM1-215ENST00000483021 HMCN2Q8NDA2 5059 aa12.52□□□□□ -0.4
R3HDM1-215ENST00000483021 hDV102S1A0JD36 115 aa12.52□□□□□ -0.41
R3HDM1-215ENST00000483021 COTL1Q14019 142 aa12.52□□□□□ -0.41
R3HDM1-215ENST00000483021 SDIM1Q6ZPB5 146 aa12.52□□□□□ -0.41
R3HDM1-215ENST00000483021 AP5S1Q9NUS5 200 aa12.52□□□□□ -0.41
R3HDM1-215ENST00000483021 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.52□□□□□ -0.41
R3HDM1-215ENST00000483021 IGLV4-60A0A075B6I1 120 aa12.51□□□□□ -0.41
R3HDM1-215ENST00000483021 AMTP48728 403 aa12.51□□□□□ -0.41
R3HDM1-215ENST00000483021 CNFNQ9BYD5 112 aa12.51□□□□□ -0.41
R3HDM1-215ENST00000483021 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.5□□□□□ -0.41
R3HDM1-215ENST00000483021 NUDT10Q8NFP7 164 aa12.5□□□□□ -0.41
R3HDM1-215ENST00000483021 NUDT11Q96G61 164 aa12.5□□□□□ -0.41
R3HDM1-215ENST00000483021 TWIST1Q15672 202 aa12.49□□□□□ -0.41
R3HDM1-215ENST00000483021 SLC51BQ86UW2 128 aa12.49□□□□□ -0.41
R3HDM1-215ENST00000483021 GFRA4Q9GZZ7 299 aa12.49□□□□□ -0.41
R3HDM1-215ENST00000483021 IGHV3-64A0A075B6Q5 118 aa12.48□□□□□ -0.41
R3HDM1-215ENST00000483021 CIRBPQ14011 172 aaKnown RBP12.48□□□□□ -0.41
R3HDM1-215ENST00000483021 TCTE3Q8IZS6 198 aa12.48□□□□□ -0.41
R3HDM1-215ENST00000483021 RPP21Q9H633 154 aaKnown RBP12.48□□□□□ -0.41
R3HDM1-215ENST00000483021 PANO1I0J062 215 aa12.47□□□□□ -0.41
R3HDM1-215ENST00000483021 SMIM15Q7Z3B0 74 aa12.46□□□□□ -0.41
R3HDM1-215ENST00000483021 RNF185Q96GF1 192 aa12.46□□□□□ -0.41
R3HDM1-215ENST00000483021 GATD1Q8NB37 220 aa12.45□□□□□ -0.42
R3HDM1-215ENST00000483021 RNASE7Q9H1E1 156 aaKnown RBP12.45□□□□□ -0.42
R3HDM1-215ENST00000483021 NCR2O95944 276 aa12.44□□□□□ -0.42
R3HDM1-215ENST00000483021 HNRNPA3P51991 378 aaKnown RBP12.44□□□□□ -0.42
R3HDM1-215ENST00000483021 CFAP161Q6P656 301 aa12.44□□□□□ -0.42
R3HDM1-215ENST00000483021 TRAV26-2A0A0B4J265 109 aa12.43□□□□□ -0.42
R3HDM1-215ENST00000483021 K7EN84 100 aa12.43□□□□□ -0.42
R3HDM1-215ENST00000483021 TEX261Q6UWH6 196 aa12.43□□□□□ -0.42
R3HDM1-215ENST00000483021 H7C423 109 aa12.42□□□□□ -0.42
R3HDM1-215ENST00000483021 SLPIP03973 132 aa12.42□□□□□ -0.42
R3HDM1-215ENST00000483021 AMMECR1LQ6DCA0 310 aa12.42□□□□□ -0.42
R3HDM1-215ENST00000483021 OCC1Q8TAD7 63 aa12.42□□□□□ -0.42
R3HDM1-215ENST00000483021 GAGE12HA6NDE8 117 aa12.41□□□□□ -0.42
R3HDM1-215ENST00000483021 APCSP02743 223 aa12.41□□□□□ -0.42
R3HDM1-215ENST00000483021 C15orf56Q8N910 161 aa12.41□□□□□ -0.42
R3HDM1-215ENST00000483021 SPACA4Q8TDM5 124 aa12.41□□□□□ -0.42
R3HDM1-215ENST00000483021 GTSF1Q8WW33 167 aa12.41□□□□□ -0.42
R3HDM1-215ENST00000483021 DPH3Q96FX2 82 aa12.41□□□□□ -0.42
R3HDM1-215ENST00000483021 A0A087WYN8 130 aa12.4□□□□□ -0.42
R3HDM1-215ENST00000483021 IGKV3OR2-268A0A0C4DH90 116 aa12.4□□□□□ -0.42
R3HDM1-215ENST00000483021 Q6ZNX1 250 aa12.4□□□□□ -0.42
R3HDM1-215ENST00000483021 Q6ZRU5 148 aa12.4□□□□□ -0.42
R3HDM1-215ENST00000483021 RPL39LQ96EH5 51 aaKnown RBP12.4□□□□□ -0.42
R3HDM1-215ENST00000483021 PLA2G2DQ9UNK4 145 aa12.4□□□□□ -0.42
R3HDM1-215ENST00000483021 TMEM250H0YL14 139 aa12.39□□□□□ -0.43
R3HDM1-215ENST00000483021 CHTF8P0CG12 524 aa12.39□□□□□ -0.43
R3HDM1-215ENST00000483021 RNASEKQ6P5S7 137 aaKnown RBP12.39□□□□□ -0.43
R3HDM1-215ENST00000483021 SDHAF1A6NFY7 115 aa12.38□□□□□ -0.43
R3HDM1-215ENST00000483021 A8MWL6 223 aa12.38□□□□□ -0.43
R3HDM1-215ENST00000483021 GATCO43716 136 aaKnown RBP12.38□□□□□ -0.43
R3HDM1-215ENST00000483021 ZNF25P17030 456 aaPredicted RBP12.38□□□□□ -0.43
R3HDM1-215ENST00000483021 FAM231DQ6ZW35 169 aa12.38□□□□□ -0.43
R3HDM1-215ENST00000483021 CHCHD10Q8WYQ3 142 aaPredicted RBP12.38□□□□□ -0.43
R3HDM1-215ENST00000483021 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.37□□□□□ -0.43
R3HDM1-215ENST00000483021 IGKV2-29A2NJV5 120 aaPredicted RBP12.37□□□□□ -0.43
R3HDM1-215ENST00000483021 FGF6P10767 208 aa12.37□□□□□ -0.43
R3HDM1-215ENST00000483021 RPS10P46783 165 aaKnown RBP12.37□□□□□ -0.43
R3HDM1-215ENST00000483021 PLAC8Q9NZF1 115 aa12.37□□□□□ -0.43
R3HDM1-215ENST00000483021 BLOC1S1P78537 153 aa12.36□□□□□ -0.43
R3HDM1-215ENST00000483021 CT83Q5H943 113 aa12.36□□□□□ -0.43
R3HDM1-215ENST00000483021 BORCS7Q96B45 105 aa12.36□□□□□ -0.43
R3HDM1-215ENST00000483021 GVQW2A0A096LPI5 108 aaPredicted RBP12.35□□□□□ -0.43
R3HDM1-215ENST00000483021 TRBV6-5A0A0K0K1A5 114 aa12.35□□□□□ -0.43
R3HDM1-215ENST00000483021 I3L3M4 83 aa12.35□□□□□ -0.43
R3HDM1-215ENST00000483021 NDUFS6O75380 124 aaKnown RBP12.35□□□□□ -0.43
R3HDM1-215ENST00000483021 FOXA3P55318 350 aaPredicted RBP12.35□□□□□ -0.43
R3HDM1-215ENST00000483021 HIGD2BQ4VC39 106 aa12.35□□□□□ -0.43
R3HDM1-215ENST00000483021 C7orf33Q8WU49 177 aa12.35□□□□□ -0.43
R3HDM1-215ENST00000483021 BTF3L4Q96K17 158 aa12.35□□□□□ -0.43
R3HDM1-215ENST00000483021 FAM210AQ96ND0 272 aa12.35□□□□□ -0.43
R3HDM1-215ENST00000483021 PMCHP20382 165 aa12.34□□□□□ -0.43
R3HDM1-215ENST00000483021 COX6A2Q02221 97 aa12.34□□□□□ -0.43
R3HDM1-215ENST00000483021 OR5A1Q8NGJ0 315 aa12.34□□□□□ -0.43
R3HDM1-215ENST00000483021 TMEM101Q96IK0 257 aa12.34□□□□□ -0.43
R3HDM1-215ENST00000483021 UBR4Q5T4S7 5183 aa12.33□□□□□ -0.44
R3HDM1-215ENST00000483021 PKIGQ9Y2B9 76 aa12.33□□□□□ -0.44
R3HDM1-215ENST00000483021 ALKAL2Q6UX46 152 aa12.32□□□□□ -0.44
R3HDM1-215ENST00000483021 LYPD6BQ8NI32 183 aa12.32□□□□□ -0.44
R3HDM1-215ENST00000483021 PHOX2AO14813 284 aa12.31□□□□□ -0.44
R3HDM1-215ENST00000483021 CEBPGP53567 150 aa12.31□□□□□ -0.44
R3HDM1-215ENST00000483021 FOXI1Q12951 378 aa12.31□□□□□ -0.44
R3HDM1-215ENST00000483021 MAJINQ3KP22 176 aa12.31□□□□□ -0.44
R3HDM1-215ENST00000483021 PRSS3P2Q8NHM4 247 aa12.31□□□□□ -0.44
R3HDM1-215ENST00000483021 MRAP2Q96G30 205 aa12.31□□□□□ -0.44
R3HDM1-215ENST00000483021 ST20Q9HBF5 79 aa12.31□□□□□ -0.44
R3HDM1-215ENST00000483021 IGKV2-24A0A0C4DH68 120 aa12.3□□□□□ -0.44
R3HDM1-215ENST00000483021 FAM231BA6NCW3 169 aa12.3□□□□□ -0.44
R3HDM1-215ENST00000483021 MT1HL1P0DM35 61 aa12.3□□□□□ -0.44
R3HDM1-215ENST00000483021 AKAP14Q86UN6 197 aa12.3□□□□□ -0.44
R3HDM1-215ENST00000483021 TMEM191AQ9H0A3 160 aa12.3□□□□□ -0.44
R3HDM1-215ENST00000483021 A0A1B0GUT8 65 aa12.29□□□□□ -0.44
R3HDM1-215ENST00000483021 HIGD1CA8MV81 97 aa12.29□□□□□ -0.44
R3HDM1-215ENST00000483021 TSHBP01222 138 aa12.29□□□□□ -0.44
R3HDM1-215ENST00000483021 ESDP10768 282 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms