RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 MIC13Q5XKP0 118 aa3.02□□□□□ -1.93
UPF3A-205ENST00000479712 ZNF738Q8NE65 137 aa3.02□□□□□ -1.93
UPF3A-205ENST00000479712 OR4B1Q8NGF8 309 aa3.02□□□□□ -1.93
UPF3A-205ENST00000479712 WDR61Q9GZS3 305 aaKnown RBP3.02□□□□□ -1.93
UPF3A-205ENST00000479712 OR5AC2Q9NZP5 309 aa3.02□□□□□ -1.93
UPF3A-205ENST00000479712 HSPB11Q9Y547 144 aa3.02□□□□□ -1.93
UPF3A-205ENST00000479712 TIMM9Q9Y5J7 89 aa3.02□□□□□ -1.93
UPF3A-205ENST00000479712 FCGBPQ9Y6R7 5405 aaPredicted RBP3.01□□□□□ -1.93
UPF3A-205ENST00000479712 TRBV19A0A075B6N1 114 aa3.01□□□□□ -1.93
UPF3A-205ENST00000479712 A0A1B0GW15 77 aa3.01□□□□□ -1.93
UPF3A-205ENST00000479712 H3BQ15 152 aa3.01□□□□□ -1.93
UPF3A-205ENST00000479712 CRXO43186 299 aaPredicted RBP3.01□□□□□ -1.93
UPF3A-205ENST00000479712 SLC25A5P05141 298 aaKnown RBP3.01□□□□□ -1.93
UPF3A-205ENST00000479712 HLA-DMBP28068 263 aa3.01□□□□□ -1.93
UPF3A-205ENST00000479712 TAS2R45P59539 299 aa3.01□□□□□ -1.93
UPF3A-205ENST00000479712 PMVKQ15126 192 aa3.01□□□□□ -1.93
UPF3A-205ENST00000479712 RRN3P1Q2M238 152 aa3.01□□□□□ -1.93
UPF3A-205ENST00000479712 LUZP6Q538Z0 58 aa3.01□□□□□ -1.93
UPF3A-205ENST00000479712 FAM222AQ5U5X8 452 aa3.01□□□□□ -1.93
UPF3A-205ENST00000479712 ORMDL3Q8N138 153 aa3.01□□□□□ -1.93
UPF3A-205ENST00000479712 C1orf158Q8N1D5 194 aa3.01□□□□□ -1.93
UPF3A-205ENST00000479712 SPANXA2-OT1Q8N9U9 137 aa3.01□□□□□ -1.93
UPF3A-205ENST00000479712 FAM167A-AS1Q96KT0 104 aa3.01□□□□□ -1.93
UPF3A-205ENST00000479712 AQP10Q96PS8 301 aa3.01□□□□□ -1.93
UPF3A-205ENST00000479712 LINC00467Q9BRT7 94 aa3.01□□□□□ -1.93
UPF3A-205ENST00000479712 SLC35B3Q9H1N7 401 aa3.01□□□□□ -1.93
UPF3A-205ENST00000479712 MED28Q9H204 178 aa3.01□□□□□ -1.93
UPF3A-205ENST00000479712 FUT9Q9Y231 359 aa3.01□□□□□ -1.93
UPF3A-205ENST00000479712 ALG5Q9Y673 324 aa3.01□□□□□ -1.93
UPF3A-205ENST00000479712 RBAKDNA6NC62 111 aa3□□□□□ -1.93
UPF3A-205ENST00000479712 H7BYZ3 331 aa3□□□□□ -1.93
UPF3A-205ENST00000479712 SLC17A3O00476 420 aa3□□□□□ -1.93
UPF3A-205ENST00000479712 TCAPO15273 167 aa3□□□□□ -1.93
UPF3A-205ENST00000479712 NBEAP1P0C6P0 100 aa3□□□□□ -1.93
UPF3A-205ENST00000479712 DEFB1P60022 68 aa3□□□□□ -1.93
UPF3A-205ENST00000479712 RHOBP62745 196 aa3□□□□□ -1.93
UPF3A-205ENST00000479712 SERF2P84101 59 aa3□□□□□ -1.93
UPF3A-205ENST00000479712 HIST1H1AQ02539 215 aaPredicted RBP3□□□□□ -1.93
UPF3A-205ENST00000479712 RGS21Q2M5E4 152 aa3□□□□□ -1.93
UPF3A-205ENST00000479712 C12orf74Q32Q52 190 aa3□□□□□ -1.93
UPF3A-205ENST00000479712 KHDC3LQ587J8 217 aa3□□□□□ -1.93
UPF3A-205ENST00000479712 NEGR1Q7Z3B1 354 aa3□□□□□ -1.93
UPF3A-205ENST00000479712 RNF182Q8N6D2 247 aa3□□□□□ -1.93
UPF3A-205ENST00000479712 SCGB1C1Q8TD33 95 aa3□□□□□ -1.93
UPF3A-205ENST00000479712 PSMG3Q9BT73 122 aaPredicted RBP3□□□□□ -1.93
UPF3A-205ENST00000479712 TMEM208Q9BTX3 173 aa3□□□□□ -1.93
UPF3A-205ENST00000479712 ZNF586Q9NXT0 402 aa3□□□□□ -1.93
UPF3A-205ENST00000479712 LENEPQ9Y5L5 61 aa3□□□□□ -1.93
UPF3A-205ENST00000479712 DEFB131BA0A096LNP1 70 aa2.99□□□□□ -1.93
UPF3A-205ENST00000479712 TRAV5A0A0B4J249 113 aa2.99□□□□□ -1.93
UPF3A-205ENST00000479712 A8MWL6 223 aa2.99□□□□□ -1.93
UPF3A-205ENST00000479712 M0R2Z0 102 aa2.99□□□□□ -1.93
UPF3A-205ENST00000479712 M6PRP20645 277 aa2.99□□□□□ -1.93
UPF3A-205ENST00000479712 SPINK13Q1W4C9 94 aa2.99□□□□□ -1.93
UPF3A-205ENST00000479712 ACOT6Q3I5F7 207 aaPredicted RBP2.99□□□□□ -1.93
UPF3A-205ENST00000479712 MIR17HGQ75NE6 70 aa2.99□□□□□ -1.93
UPF3A-205ENST00000479712 SUN5Q8TC36 379 aa2.99□□□□□ -1.93
UPF3A-205ENST00000479712 TMEM263Q8WUH6 116 aaKnown RBP2.99□□□□□ -1.93
UPF3A-205ENST00000479712 FXYD5Q96DB9 178 aa2.99□□□□□ -1.93
UPF3A-205ENST00000479712 GNPNAT1Q96EK6 184 aaPredicted RBP2.99□□□□□ -1.93
UPF3A-205ENST00000479712 PRO0628Q9UI54 55 aa2.99□□□□□ -1.93
UPF3A-205ENST00000479712 BORCS7-ASMTA0A0B4J1R7 106 aa2.98□□□□□ -1.93
UPF3A-205ENST00000479712 C7orf71A4D174 169 aa2.98□□□□□ -1.93
UPF3A-205ENST00000479712 M0R3E3 92 aa2.98□□□□□ -1.93
UPF3A-205ENST00000479712 OR7C2O60412 319 aa2.98□□□□□ -1.93
UPF3A-205ENST00000479712 PYYP10082 97 aa2.98□□□□□ -1.93
UPF3A-205ENST00000479712 CSN1S1P47710 185 aa2.98□□□□□ -1.93
UPF3A-205ENST00000479712 FXYD7P58549 80 aa2.98□□□□□ -1.93
UPF3A-205ENST00000479712 DAD1P61803 113 aa2.98□□□□□ -1.93
UPF3A-205ENST00000479712 UBE2L3P68036 154 aaKnown RBP2.98□□□□□ -1.93
UPF3A-205ENST00000479712 BTN1A1Q13410 526 aa2.98□□□□□ -1.93
UPF3A-205ENST00000479712 FAM74A1Q5RGS3 127 aa2.98□□□□□ -1.93
UPF3A-205ENST00000479712 IBA57Q5T440 356 aaKnown RBP2.98□□□□□ -1.93
UPF3A-205ENST00000479712 TMEM78Q5T7P6 136 aa2.98□□□□□ -1.93
UPF3A-205ENST00000479712 FAM19A1Q7Z5A9 133 aa2.98□□□□□ -1.93
UPF3A-205ENST00000479712 BAP18Q8IXM2 172 aa2.98□□□□□ -1.93
UPF3A-205ENST00000479712 ZNF680Q8NEM1 530 aa2.98□□□□□ -1.93
UPF3A-205ENST00000479712 ORAOV1Q8WV07 137 aa2.98□□□□□ -1.93
UPF3A-205ENST00000479712 LINC01587Q99440 93 aa2.98□□□□□ -1.93
UPF3A-205ENST00000479712 AGPAT4-IT1Q9H0P7 198 aa2.98□□□□□ -1.93
UPF3A-205ENST00000479712 OTORQ9NRC9 128 aa2.98□□□□□ -1.93
UPF3A-205ENST00000479712 ZNF492Q9P255 531 aa2.98□□□□□ -1.93
UPF3A-205ENST00000479712 TNFSF18Q9UNG2 199 aa2.98□□□□□ -1.93
UPF3A-205ENST00000479712 TIMM8BQ9Y5J9 83 aaPredicted RBP2.98□□□□□ -1.93
UPF3A-205ENST00000479712 GPR98Q8WXG9 6306 aa2.97□□□□□ -1.93
UPF3A-205ENST00000479712 TRAV12-2A0A075B6T6 113 aa2.97□□□□□ -1.93
UPF3A-205ENST00000479712 H3BNG1 76 aa2.97□□□□□ -1.93
UPF3A-205ENST00000479712 ATP5G1P05496 136 aa2.97□□□□□ -1.93
UPF3A-205ENST00000479712 NTF3P20783 257 aa2.97□□□□□ -1.93
UPF3A-205ENST00000479712 ATP6V0CP27449 155 aa2.97□□□□□ -1.93
UPF3A-205ENST00000479712 ATP5G3P48201 142 aa2.97□□□□□ -1.93
UPF3A-205ENST00000479712 CDC34P49427 236 aaPredicted RBP2.97□□□□□ -1.93
UPF3A-205ENST00000479712 ZNF345Q14585 488 aa2.97□□□□□ -1.93
UPF3A-205ENST00000479712 TDRG1Q3Y452 100 aa2.97□□□□□ -1.93
UPF3A-205ENST00000479712 EIF4E3Q8N5X7 224 aaKnown RBP2.97□□□□□ -1.93
UPF3A-205ENST00000479712 ZFAND2AQ8N6M9 145 aa2.97□□□□□ -1.93
UPF3A-205ENST00000479712 ST20-AS1Q8NBB2 130 aa2.97□□□□□ -1.93
UPF3A-205ENST00000479712 OR2T35Q8NGX2 323 aa2.97□□□□□ -1.93
UPF3A-205ENST00000479712 BLNKQ8WV28 456 aa2.97□□□□□ -1.93
UPF3A-205ENST00000479712 TMEM70Q9BUB7 260 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms