RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 C14orf177Q52M58 125 aa14.23□□□□□ -0.13
COL9A3-211ENST00000477612 LINC00269Q8N2A0 174 aa14.23□□□□□ -0.13
COL9A3-211ENST00000477612 COTL1Q14019 142 aa14.22□□□□□ -0.13
COL9A3-211ENST00000477612 FAM74A3Q4VXF1 159 aa14.22□□□□□ -0.13
COL9A3-211ENST00000477612 Q5VSD8 79 aa14.22□□□□□ -0.13
COL9A3-211ENST00000477612 TRAV26-2A0A0B4J265 109 aa14.21□□□□□ -0.13
COL9A3-211ENST00000477612 HIGD1CA8MV81 97 aa14.2□□□□□ -0.14
COL9A3-211ENST00000477612 SMR3BP02814 79 aaPredicted RBP14.2□□□□□ -0.14
COL9A3-211ENST00000477612 REG3AQ06141 175 aa14.2□□□□□ -0.14
COL9A3-211ENST00000477612 RPL39LQ96EH5 51 aaKnown RBP14.2□□□□□ -0.14
COL9A3-211ENST00000477612 IGLV4-60A0A075B6I1 120 aa14.19□□□□□ -0.14
COL9A3-211ENST00000477612 TRAV8-4A0A0B4J246 113 aa14.19□□□□□ -0.14
COL9A3-211ENST00000477612 A0A1B0GUT8 65 aa14.19□□□□□ -0.14
COL9A3-211ENST00000477612 NCR2O95944 276 aa14.19□□□□□ -0.14
COL9A3-211ENST00000477612 HAMPP81172 84 aa14.19□□□□□ -0.14
COL9A3-211ENST00000477612 TMEM241Q24JQ0 296 aa14.19□□□□□ -0.14
COL9A3-211ENST00000477612 ISOC2Q96AB3 205 aa14.19□□□□□ -0.14
COL9A3-211ENST00000477612 BORCS7Q96B45 105 aa14.19□□□□□ -0.14
COL9A3-211ENST00000477612 TMEM191AQ9H0A3 160 aa14.19□□□□□ -0.14
COL9A3-211ENST00000477612 SMDT1Q9H4I9 107 aa14.19□□□□□ -0.14
COL9A3-211ENST00000477612 V9GYV3 84 aa14.19□□□□□ -0.14
COL9A3-211ENST00000477612 TRBV6-5A0A0K0K1A5 114 aa14.18□□□□□ -0.14
COL9A3-211ENST00000477612 C9JQL5 133 aa14.18□□□□□ -0.14
COL9A3-211ENST00000477612 AMTP48728 403 aa14.18□□□□□ -0.14
COL9A3-211ENST00000477612 CLPSL2Q6UWE3 100 aa14.18□□□□□ -0.14
COL9A3-211ENST00000477612 USP17L23D6RBM5 183 aa14.17□□□□□ -0.14
COL9A3-211ENST00000477612 RPL23P62829 140 aaKnown RBP14.17□□□□□ -0.14
COL9A3-211ENST00000477612 SDHAF1A6NFY7 115 aa14.16□□□□□ -0.14
COL9A3-211ENST00000477612 FAM229AH3BQW9 127 aa14.16□□□□□ -0.14
COL9A3-211ENST00000477612 UBE2L6O14933 153 aa14.16□□□□□ -0.14
COL9A3-211ENST00000477612 HLA-DQA1P01909 254 aa14.16□□□□□ -0.14
COL9A3-211ENST00000477612 LINC01620Q4KN68 170 aa14.16□□□□□ -0.14
COL9A3-211ENST00000477612 DEFB104AQ8WTQ1 72 aa14.16□□□□□ -0.14
COL9A3-211ENST00000477612 H7C423 109 aa14.15□□□□□ -0.14
COL9A3-211ENST00000477612 PEA15Q15121 130 aa14.15□□□□□ -0.14
COL9A3-211ENST00000477612 RNF185Q96GF1 192 aa14.15□□□□□ -0.14
COL9A3-211ENST00000477612 SRSF3P84103 164 aaKnown RBP14.14□□□□□ -0.15
COL9A3-211ENST00000477612 DGAT2L7PQ6IED9 249 aa14.14□□□□□ -0.15
COL9A3-211ENST00000477612 NUP35Q8NFH5 326 aa14.14□□□□□ -0.15
COL9A3-211ENST00000477612 NAT8Q9UHE5 227 aa14.14□□□□□ -0.15
COL9A3-211ENST00000477612 SRRM2Q9UQ35 2752 aaKnown RBP14.14□□□□□ -0.15
COL9A3-211ENST00000477612 PRSS1P07477 247 aa14.13□□□□□ -0.15
COL9A3-211ENST00000477612 INAFM2P0DMQ5 153 aa14.13□□□□□ -0.15
COL9A3-211ENST00000477612 RAB4AP20338 218 aa14.13□□□□□ -0.15
COL9A3-211ENST00000477612 I3L3M4 83 aa14.12□□□□□ -0.15
COL9A3-211ENST00000477612 GAS8-AS1O95177 125 aa14.12□□□□□ -0.15
COL9A3-211ENST00000477612 CLRN3Q8NCR9 226 aa14.12□□□□□ -0.15
COL9A3-211ENST00000477612 IGLV10-54A0A075B6I4 117 aa14.11□□□□□ -0.15
COL9A3-211ENST00000477612 APCSP02743 223 aa14.11□□□□□ -0.15
COL9A3-211ENST00000477612 POLR2KP53803 58 aaKnown RBP14.11□□□□□ -0.15
COL9A3-211ENST00000477612 RIGQ13278 110 aa14.11□□□□□ -0.15
COL9A3-211ENST00000477612 MRAP2Q96G30 205 aa14.11□□□□□ -0.15
COL9A3-211ENST00000477612 NAT8BQ9UHF3 227 aa14.11□□□□□ -0.15
COL9A3-211ENST00000477612 ADIRFQ15847 76 aa14.1□□□□□ -0.15
COL9A3-211ENST00000477612 C9orf163Q8N9P6 203 aa14.1□□□□□ -0.15
COL9A3-211ENST00000477612 ST20Q9HBF5 79 aa14.1□□□□□ -0.15
COL9A3-211ENST00000477612 SMIM27A0A1W2PRY6 76 aa14.09□□□□□ -0.15
COL9A3-211ENST00000477612 ESDP10768 282 aa14.09□□□□□ -0.15
COL9A3-211ENST00000477612 PMCHP20382 165 aa14.09□□□□□ -0.15
COL9A3-211ENST00000477612 SCXQ7RTU7 201 aa14.09□□□□□ -0.15
COL9A3-211ENST00000477612 AMN1Q8IY45 258 aa14.09□□□□□ -0.15
COL9A3-211ENST00000477612 CHAC1Q9BUX1 264 aa14.09□□□□□ -0.15
COL9A3-211ENST00000477612 TRBV27A0A0K0K1C4 114 aa14.08□□□□□ -0.16
COL9A3-211ENST00000477612 ZNF25P17030 456 aaPredicted RBP14.07□□□□□ -0.16
COL9A3-211ENST00000477612 RPS10P46783 165 aaKnown RBP14.07□□□□□ -0.16
COL9A3-211ENST00000477612 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.06□□□□□ -0.16
COL9A3-211ENST00000477612 IGKV2-29A2NJV5 120 aaPredicted RBP14.06□□□□□ -0.16
COL9A3-211ENST00000477612 TSHBP01222 138 aa14.06□□□□□ -0.16
COL9A3-211ENST00000477612 FGF6P10767 208 aa14.06□□□□□ -0.16
COL9A3-211ENST00000477612 AMMECR1LQ6DCA0 310 aa14.06□□□□□ -0.16
COL9A3-211ENST00000477612 CNBPP62633 177 aaKnown RBP14.05□□□□□ -0.16
COL9A3-211ENST00000477612 CIRBP-AS1Q8TBR5 109 aa14.05□□□□□ -0.16
COL9A3-211ENST00000477612 PPP1R17O96001 155 aa14.04□□□□□ -0.16
COL9A3-211ENST00000477612 RNASEKQ6P5S7 137 aaKnown RBP14.04□□□□□ -0.16
COL9A3-211ENST00000477612 MYCBP2O75592 4640 aa14.04□□□□□ -0.16
COL9A3-211ENST00000477612 A0A1B0GW15 77 aa14.03□□□□□ -0.16
COL9A3-211ENST00000477612 FAM104BQ5XKR9 115 aa14.03□□□□□ -0.16
COL9A3-211ENST00000477612 LINC00528Q8N1L1 170 aa14.03□□□□□ -0.16
COL9A3-211ENST00000477612 NRACQ8N912 160 aa14.03□□□□□ -0.16
COL9A3-211ENST00000477612 TMEM242Q9NWH2 141 aa14.03□□□□□ -0.16
COL9A3-211ENST00000477612 PLA2G1BP04054 148 aaKnown RBP14.02□□□□□ -0.17
COL9A3-211ENST00000477612 OR5A1Q8NGJ0 315 aa14.02□□□□□ -0.17
COL9A3-211ENST00000477612 LINC00862A6NCI5 91 aa14.01□□□□□ -0.17
COL9A3-211ENST00000477612 SMKR1H3BMG3 65 aa14.01□□□□□ -0.17
COL9A3-211ENST00000477612 VCYO14598 125 aa14.01□□□□□ -0.17
COL9A3-211ENST00000477612 SDIM1Q6ZPB5 146 aa14.01□□□□□ -0.17
COL9A3-211ENST00000477612 MRPL52Q86TS9 123 aaKnown RBP14.01□□□□□ -0.17
COL9A3-211ENST00000477612 FLG2Q5D862 2391 aaPredicted RBP14.01□□□□□ -0.17
COL9A3-211ENST00000477612 hDV102S1A0JD36 115 aa14□□□□□ -0.17
COL9A3-211ENST00000477612 GAGE12HA6NDE8 117 aa14□□□□□ -0.17
COL9A3-211ENST00000477612 SUMO2P61956 95 aaKnown RBP14□□□□□ -0.17
COL9A3-211ENST00000477612 MRPL51Q4U2R6 128 aaKnown RBP14□□□□□ -0.17
COL9A3-211ENST00000477612 BTF3L4Q96K17 158 aa14□□□□□ -0.17
COL9A3-211ENST00000477612 TRBV24-1A0A075B6N3 115 aa13.99□□□□□ -0.17
COL9A3-211ENST00000477612 IGKV3OR2-268A0A0C4DH90 116 aa13.99□□□□□ -0.17
COL9A3-211ENST00000477612 PPP1R2P9O14990 202 aa13.99□□□□□ -0.17
COL9A3-211ENST00000477612 SLPIP03973 132 aa13.99□□□□□ -0.17
COL9A3-211ENST00000477612 CFAP161Q6P656 301 aa13.99□□□□□ -0.17
COL9A3-211ENST00000477612 C15orf56Q8N910 161 aa13.99□□□□□ -0.17
COL9A3-211ENST00000477612 CHCHD10Q8WYQ3 142 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms