RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 CFAP47Q6ZTR5 3102 aa8.91□□□□□ -0.98
U2AF1-209ENST00000475639 RBAKDNA6NC62 111 aa8.9□□□□□ -0.98
U2AF1-209ENST00000475639 PRR15LQ9BU68 103 aa8.9□□□□□ -0.98
U2AF1-209ENST00000475639 TRBV10-2A0A0K0K1G8 114 aa8.9□□□□□ -0.98
U2AF1-209ENST00000475639 ODF1Q14990 250 aa8.9□□□□□ -0.98
U2AF1-209ENST00000475639 TMEM61Q8N0U2 210 aa8.9□□□□□ -0.98
U2AF1-209ENST00000475639 C20orf197Q8N268 126 aa8.9□□□□□ -0.98
U2AF1-209ENST00000475639 LOXP28300 417 aaPredicted RBP8.9□□□□□ -0.98
U2AF1-209ENST00000475639 DAZ2Q13117 558 aaKnown RBP8.9□□□□□ -0.98
U2AF1-209ENST00000475639 DAZ4Q86SG3 579 aaKnown RBP8.9□□□□□ -0.98
U2AF1-209ENST00000475639 MAPK1IP1LQ8NDC0 245 aa8.9□□□□□ -0.98
U2AF1-209ENST00000475639 DAZ3Q9NR90 486 aaKnown RBP8.9□□□□□ -0.98
U2AF1-209ENST00000475639 IGLV2-11P01706 119 aa8.9□□□□□ -0.99
U2AF1-209ENST00000475639 U3KQK5 164 aa8.9□□□□□ -0.99
U2AF1-209ENST00000475639 MAPKAPK5-AS1Q8N8E1 139 aa8.89□□□□□ -0.99
U2AF1-209ENST00000475639 LINC01548A6NM66 108 aa8.89□□□□□ -0.99
U2AF1-209ENST00000475639 Q8N1Y9 231 aa8.89□□□□□ -0.99
U2AF1-209ENST00000475639 PTH2Q96A98 100 aa8.89□□□□□ -0.99
U2AF1-209ENST00000475639 SPAG11BQ08648 103 aa8.88□□□□□ -0.99
U2AF1-209ENST00000475639 Q96MF0 132 aa8.88□□□□□ -0.99
U2AF1-209ENST00000475639 IGLV3-9A0A075B6K5 115 aa8.88□□□□□ -0.99
U2AF1-209ENST00000475639 E7EUB6 86 aa8.88□□□□□ -0.99
U2AF1-209ENST00000475639 V9GYY9 64 aa8.88□□□□□ -0.99
U2AF1-209ENST00000475639 LGALS9O00182 355 aa8.87□□□□□ -0.99
U2AF1-209ENST00000475639 GP9P14770 177 aa8.87□□□□□ -0.99
U2AF1-209ENST00000475639 DIAPH2-AS1Q14236 149 aa8.87□□□□□ -0.99
U2AF1-209ENST00000475639 IGHV3-30P01768 117 aa8.87□□□□□ -0.99
U2AF1-209ENST00000475639 IGHV3-33P01772 117 aa8.87□□□□□ -0.99
U2AF1-209ENST00000475639 IGHV3-30-3P0DP02 117 aa8.87□□□□□ -0.99
U2AF1-209ENST00000475639 IGHV3-30-5P0DP03 117 aa8.87□□□□□ -0.99
U2AF1-209ENST00000475639 NPBQ8NG41 125 aa8.87□□□□□ -0.99
U2AF1-209ENST00000475639 GATA1P15976 413 aaPredicted RBP8.86□□□□□ -0.99
U2AF1-209ENST00000475639 CCL24O00175 119 aa8.86□□□□□ -0.99
U2AF1-209ENST00000475639 MPLKIPQ8TAP9 179 aa8.86□□□□□ -0.99
U2AF1-209ENST00000475639 TECTAO75443 2155 aa8.86□□□□□ -0.99
U2AF1-209ENST00000475639 TRAV23DV6A0A075B6W5 121 aa8.86□□□□□ -0.99
U2AF1-209ENST00000475639 TEX22C9J3V5 150 aa8.86□□□□□ -0.99
U2AF1-209ENST00000475639 CRIP1P50238 77 aa8.86□□□□□ -0.99
U2AF1-209ENST00000475639 C16orf74Q96GX8 76 aa8.86□□□□□ -0.99
U2AF1-209ENST00000475639 MUC6Q6W4X9 2439 aa8.85□□□□□ -0.99
U2AF1-209ENST00000475639 CCDC179H3BU77 68 aa8.85□□□□□ -0.99
U2AF1-209ENST00000475639 IGHV4OR15-8A0A075B7B6 117 aa8.85□□□□□ -0.99
U2AF1-209ENST00000475639 A0A087WW49 117 aa8.85□□□□□ -0.99
U2AF1-209ENST00000475639 HOXB4P17483 251 aaPredicted RBP8.85□□□□□ -0.99
U2AF1-209ENST00000475639 TRBV7-3A0A075B6L6 115 aa8.85□□□□□ -0.99
U2AF1-209ENST00000475639 A0A0U1RQV1 116 aa8.85□□□□□ -0.99
U2AF1-209ENST00000475639 UPK3BQ9BT76 320 aa8.85□□□□□ -0.99
U2AF1-209ENST00000475639 K7EQD1 137 aa8.84□□□□□ -0.99
U2AF1-209ENST00000475639 TPSG1Q9NRR2 321 aa8.84□□□□□ -0.99
U2AF1-209ENST00000475639 ZFHX4Q86UP3 3567 aa8.84□□□□□ -0.99
U2AF1-209ENST00000475639 UQCRQO14949 82 aa8.84□□□□□ -0.99
U2AF1-209ENST00000475639 C17orf58Q2M2W7 97 aa8.84□□□□□ -0.99
U2AF1-209ENST00000475639 C9orf66Q5T8R8 295 aa8.84□□□□□ -0.99
U2AF1-209ENST00000475639 MIR7-3HGQ8N6C7 128 aa8.84□□□□□ -0.99
U2AF1-209ENST00000475639 B9D2Q9BPU9 175 aa8.84□□□□□ -0.99
U2AF1-209ENST00000475639 FAM236DA0A1B0GTK5 79 aa8.84□□□□□ -0.99
U2AF1-209ENST00000475639 FAM236CP0DP71 79 aa8.84□□□□□ -0.99
U2AF1-209ENST00000475639 COX7BP24311 80 aa8.84□□□□□ -0.99
U2AF1-209ENST00000475639 RPL39LQ96EH5 51 aaKnown RBP8.84□□□□□ -0.99
U2AF1-209ENST00000475639 HIGD2AQ9BW72 106 aa8.84□□□□□ -0.99
U2AF1-209ENST00000475639 DSPP15924 2871 aaKnown RBP8.84□□□□□ -0.99
U2AF1-209ENST00000475639 DAND5Q8N907 189 aa8.83□□□□□ -1
U2AF1-209ENST00000475639 DCHS1Q96JQ0 3298 aa8.83□□□□□ -1
U2AF1-209ENST00000475639 Q0VFX4 171 aa8.83□□□□□ -1
U2AF1-209ENST00000475639 GPHB5Q86YW7 130 aa8.83□□□□□ -1
U2AF1-209ENST00000475639 NDUFC2-KCTD14E9PQ53 114 aa8.83□□□□□ -1
U2AF1-209ENST00000475639 AJUBAQ96IF1 538 aa8.83□□□□□ -1
U2AF1-209ENST00000475639 VPREB3Q9UKI3 123 aa8.83□□□□□ -1
U2AF1-209ENST00000475639 KLK12Q9UKR0 248 aa8.83□□□□□ -1
U2AF1-209ENST00000475639 KIR2DL5BQ8NHK3 375 aa8.82□□□□□ -1
U2AF1-209ENST00000475639 KAAG1Q9UBP8 84 aa8.82□□□□□ -1
U2AF1-209ENST00000475639 WDFY4Q6ZS81 3184 aa8.82□□□□□ -1
U2AF1-209ENST00000475639 NDUFV3P56181 108 aaKnown RBP8.82□□□□□ -1
U2AF1-209ENST00000475639 NCR3O14931 201 aa8.82□□□□□ -1
U2AF1-209ENST00000475639 GAS8-AS1O95177 125 aa8.82□□□□□ -1
U2AF1-209ENST00000475639 PRRC2CQ9Y520 2896 aaKnown RBP8.82□□□□□ -1
U2AF1-209ENST00000475639 SERP1Q9Y6X1 66 aa8.81□□□□□ -1
U2AF1-209ENST00000475639 IGHV4-59P01825 116 aa8.81□□□□□ -1
U2AF1-209ENST00000475639 NAV2Q8IVL1 2488 aa8.81□□□□□ -1
U2AF1-209ENST00000475639 SPRY2O43597 315 aa8.81□□□□□ -1
U2AF1-209ENST00000475639 CLEC2BQ92478 149 aa8.81□□□□□ -1
U2AF1-209ENST00000475639 DMDP11532 3685 aa8.81□□□□□ -1
U2AF1-209ENST00000475639 ESM1Q9NQ30 184 aa8.8□□□□□ -1
U2AF1-209ENST00000475639 ZFHX2Q9C0A1 2572 aaPredicted RBP8.8□□□□□ -1
U2AF1-209ENST00000475639 TRBV6-1A0A0K0K1D8 114 aa8.8□□□□□ -1
U2AF1-209ENST00000475639 HIST2H2BDQ6DRA6 164 aa8.8□□□□□ -1
U2AF1-209ENST00000475639 APRG1Q8IVJ8 170 aa8.8□□□□□ -1
U2AF1-209ENST00000475639 MSRB1Q9NZV6 116 aa8.8□□□□□ -1
U2AF1-209ENST00000475639 A6NED7 52 aa8.79□□□□□ -1
U2AF1-209ENST00000475639 LINC01546A6NGU7 62 aa8.79□□□□□ -1
U2AF1-209ENST00000475639 ATP5EP2Q5VTU8 51 aa8.79□□□□□ -1
U2AF1-209ENST00000475639 Q8N9L7 120 aa8.79□□□□□ -1
U2AF1-209ENST00000475639 DSCAMO60469 2012 aa8.79□□□□□ -1
U2AF1-209ENST00000475639 J3QKU1 62 aa8.79□□□□□ -1
U2AF1-209ENST00000475639 KLK5Q9Y337 293 aaPredicted RBP8.79□□□□□ -1
U2AF1-209ENST00000475639 A0A096LNI7 61 aa8.78□□□□□ -1
U2AF1-209ENST00000475639 C14orf177Q52M58 125 aa8.78□□□□□ -1
U2AF1-209ENST00000475639 IGHV1-58A0A0C4DH39 117 aa8.78□□□□□ -1
U2AF1-209ENST00000475639 F8W735 103 aaPredicted RBP8.78□□□□□ -1
U2AF1-209ENST00000475639 UBE2D3P61077 147 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms