RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 NF1P21359 2839 aa8.04□□□□□ -1.12
C9orf3-214ENST00000473778 IGHV3-64A0A075B6Q5 118 aa8.04□□□□□ -1.12
C9orf3-214ENST00000473778 CFC1BP0CG36 223 aa8.04□□□□□ -1.12
C9orf3-214ENST00000473778 CFC1P0CG37 223 aa8.04□□□□□ -1.12
C9orf3-214ENST00000473778 DEFB136Q30KP8 78 aa8.04□□□□□ -1.12
C9orf3-214ENST00000473778 NSUN5P1Q3KNT7 163 aa8.04□□□□□ -1.12
C9orf3-214ENST00000473778 TTC32Q5I0X7 151 aa8.04□□□□□ -1.12
C9orf3-214ENST00000473778 NDUFA11Q86Y39 141 aa8.04□□□□□ -1.12
C9orf3-214ENST00000473778 NIPBLQ6KC79 2804 aaeCLIP8.03□□□□□ -1.12
C9orf3-214ENST00000473778 IGHV3-73A0A0B4J1V6 119 aa8.03□□□□□ -1.12
C9orf3-214ENST00000473778 LOC107984156A0A0G2JMH3 177 aa8.03□□□□□ -1.12
C9orf3-214ENST00000473778 ARL17AQ8IVW1 177 aa8.03□□□□□ -1.12
C9orf3-214ENST00000473778 SLC25A29Q8N8R3 303 aa8.03□□□□□ -1.12
C9orf3-214ENST00000473778 NBPF19A0A087WUL8 3843 aa8.03□□□□□ -1.12
C9orf3-214ENST00000473778 TLN2Q9Y4G6 2542 aa8.03□□□□□ -1.12
C9orf3-214ENST00000473778 KNCNA6PVL3 124 aa8.03□□□□□ -1.12
C9orf3-214ENST00000473778 J3QQQ9 107 aa8.03□□□□□ -1.12
C9orf3-214ENST00000473778 SNCGO76070 127 aa8.03□□□□□ -1.12
C9orf3-214ENST00000473778 IFITM1P13164 125 aa8.03□□□□□ -1.12
C9orf3-214ENST00000473778 HTN1P15515 57 aa8.03□□□□□ -1.12
C9orf3-214ENST00000473778 UBE2D3P61077 147 aa8.03□□□□□ -1.12
C9orf3-214ENST00000473778 UBE2D2P62837 147 aa8.03□□□□□ -1.12
C9orf3-214ENST00000473778 C20orf203Q8NBC4 194 aa8.03□□□□□ -1.12
C9orf3-214ENST00000473778 BAHCC1Q9P281 2608 aa8.02□□□□□ -1.13
C9orf3-214ENST00000473778 TGFAP01135 160 aa8.02□□□□□ -1.13
C9orf3-214ENST00000473778 PAPPA-AS1Q5QFB9 102 aa8.02□□□□□ -1.13
C9orf3-214ENST00000473778 ZNF702PQ9H963 129 aa8.02□□□□□ -1.13
C9orf3-214ENST00000473778 ZNF462Q96JM2 2506 aa8.02□□□□□ -1.13
C9orf3-214ENST00000473778 IGLV4-3A0A075B6K6 122 aa8.02□□□□□ -1.13
C9orf3-214ENST00000473778 RBMY1BA6NDE4 496 aaKnown RBP8.02□□□□□ -1.13
C9orf3-214ENST00000473778 RBMY1EA6NEQ0 496 aaKnown RBP8.02□□□□□ -1.13
C9orf3-214ENST00000473778 A8MWV9 139 aa8.02□□□□□ -1.13
C9orf3-214ENST00000473778 RBMY1DP0C7P1 496 aaKnown RBP8.02□□□□□ -1.13
C9orf3-214ENST00000473778 HERVK_113P61574 105 aa8.02□□□□□ -1.13
C9orf3-214ENST00000473778 LYRM7Q5U5X0 104 aa8.02□□□□□ -1.13
C9orf3-214ENST00000473778 CEMP1Q6PRD7 247 aaPredicted RBP8.02□□□□□ -1.13
C9orf3-214ENST00000473778 TRPT1Q86TN4 253 aaKnown RBP8.02□□□□□ -1.13
C9orf3-214ENST00000473778 LINC01356Q8N9X3 169 aa8.02□□□□□ -1.13
C9orf3-214ENST00000473778 SPANXA1Q9NS26 97 aa8.02□□□□□ -1.13
C9orf3-214ENST00000473778 A0A0J9YXV3 536 aa8.01□□□□□ -1.13
C9orf3-214ENST00000473778 TMEM223A0PJW6 202 aa8.01□□□□□ -1.13
C9orf3-214ENST00000473778 ZNF22P17026 224 aaPredicted RBP8.01□□□□□ -1.13
C9orf3-214ENST00000473778 SLURP1P55000 103 aa8.01□□□□□ -1.13
C9orf3-214ENST00000473778 VPREB3Q9UKI3 123 aa8.01□□□□□ -1.13
C9orf3-214ENST00000473778 ANKRD29Q8N6D5 301 aa8□□□□□ -1.13
C9orf3-214ENST00000473778 DUX3Q96PT4 197 aa8□□□□□ -1.13
C9orf3-214ENST00000473778 BEX4Q9NWD9 120 aaPredicted RBP8□□□□□ -1.13
C9orf3-214ENST00000473778 FASNP49327 2511 aaKnown RBP8□□□□□ -1.13
C9orf3-214ENST00000473778 I3L3M4 83 aa8□□□□□ -1.13
C9orf3-214ENST00000473778 TCL1BO95988 128 aa8□□□□□ -1.13
C9orf3-214ENST00000473778 RHOHQ15669 191 aa8□□□□□ -1.13
C9orf3-214ENST00000473778 RNASE13Q5GAN3 156 aaKnown RBP8□□□□□ -1.13
C9orf3-214ENST00000473778 Q6ZSN1 163 aa8□□□□□ -1.13
C9orf3-214ENST00000473778 PRRC2AP48634 2157 aaKnown RBP8□□□□□ -1.13
C9orf3-214ENST00000473778 TRAV4A0A0B4J268 109 aa7.99□□□□□ -1.13
C9orf3-214ENST00000473778 TMEM89A2RUT3 159 aa7.99□□□□□ -1.13
C9orf3-214ENST00000473778 SBSPONQ8IVN8 264 aa7.99□□□□□ -1.13
C9orf3-214ENST00000473778 C10orf126Q8N4M7 172 aa7.99□□□□□ -1.13
C9orf3-214ENST00000473778 DEFB131AP59861 70 aa7.99□□□□□ -1.13
C9orf3-214ENST00000473778 RNF152Q8N8N0 203 aa7.99□□□□□ -1.13
C9orf3-214ENST00000473778 UBE2E2Q96LR5 201 aa7.99□□□□□ -1.13
C9orf3-214ENST00000473778 ADARB2-AS1A8MUL3 147 aa7.98□□□□□ -1.13
C9orf3-214ENST00000473778 LGALS3P17931 250 aaKnown RBP7.98□□□□□ -1.13
C9orf3-214ENST00000473778 UBR5O95071 2799 aaPredicted RBP7.98□□□□□ -1.13
C9orf3-214ENST00000473778 A4D1N5 150 aa7.98□□□□□ -1.13
C9orf3-214ENST00000473778 FSHBP01225 129 aa7.98□□□□□ -1.13
C9orf3-214ENST00000473778 PRB1P04280 392 aa7.98□□□□□ -1.13
C9orf3-214ENST00000473778 MEIG1Q5JSS6 88 aa7.98□□□□□ -1.13
C9orf3-214ENST00000473778 Q6Q795 121 aa7.98□□□□□ -1.13
C9orf3-214ENST00000473778 Q6YL49 198 aa7.98□□□□□ -1.13
C9orf3-214ENST00000473778 PPDPFQ9H3Y8 114 aa7.98□□□□□ -1.13
C9orf3-214ENST00000473778 SONP18583 2426 aaKnown RBP7.98□□□□□ -1.13
C9orf3-214ENST00000473778 NAV2Q8IVL1 2488 aa7.98□□□□□ -1.13
C9orf3-214ENST00000473778 WNK1Q9H4A3 2382 aa7.97□□□□□ -1.13
C9orf3-214ENST00000473778 LEPROTO15243 131 aa7.97□□□□□ -1.13
C9orf3-214ENST00000473778 ELANEP08246 267 aa7.97□□□□□ -1.13
C9orf3-214ENST00000473778 TRAV8-3A0A0A6YYJ7 113 aa7.97□□□□□ -1.13
C9orf3-214ENST00000473778 H3BMM0 161 aa7.97□□□□□ -1.13
C9orf3-214ENST00000473778 M0QXV9 152 aa7.97□□□□□ -1.13
C9orf3-214ENST00000473778 CRLF1O75462 422 aa7.97□□□□□ -1.13
C9orf3-214ENST00000473778 KRTAP10-9P60411 292 aa7.97□□□□□ -1.13
C9orf3-214ENST00000473778 TMEM61Q8N0U2 210 aa7.97□□□□□ -1.13
C9orf3-214ENST00000473778 APCP25054 2843 aa7.96□□□□□ -1.13
C9orf3-214ENST00000473778 TRGV11A0A075B6L2 103 aa7.96□□□□□ -1.13
C9orf3-214ENST00000473778 A8MZ25 164 aa7.96□□□□□ -1.13
C9orf3-214ENST00000473778 DSCR9P59020 149 aa7.96□□□□□ -1.13
C9orf3-214ENST00000473778 SPXQ9BT56 116 aa7.96□□□□□ -1.13
C9orf3-214ENST00000473778 TRAV2A0A0B4J234 112 aa7.96□□□□□ -1.14
C9orf3-214ENST00000473778 SCGB1C2P0DMR2 95 aa7.96□□□□□ -1.14
C9orf3-214ENST00000473778 CD28P10747 220 aa7.96□□□□□ -1.14
C9orf3-214ENST00000473778 MUSTN1Q8IVN3 82 aa7.96□□□□□ -1.14
C9orf3-214ENST00000473778 LITAFQ99732 161 aa7.96□□□□□ -1.14
C9orf3-214ENST00000473778 PRO1854Q9UHT4 67 aa7.96□□□□□ -1.14
C9orf3-214ENST00000473778 A8MTW9 85 aa7.95□□□□□ -1.14
C9orf3-214ENST00000473778 IGHV3-30-3P0DP02 117 aa7.95□□□□□ -1.14
C9orf3-214ENST00000473778 TMEM263Q8WUH6 116 aaKnown RBP7.95□□□□□ -1.14
C9orf3-214ENST00000473778 TMEM126AQ9H061 195 aa7.95□□□□□ -1.14
C9orf3-214ENST00000473778 A0A0J9YXY3 114 aa7.95□□□□□ -1.14
C9orf3-214ENST00000473778 J3QLI3 93 aa7.95□□□□□ -1.14
C9orf3-214ENST00000473778 IGHV4-31P0DP07 118 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms