RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 SUMO4Q6EEV6 95 aa7.81□□□□□ -1.16
TRAF4-209ENST00000473421 NKX6-2Q9C056 277 aaPredicted RBP7.81□□□□□ -1.16
TRAF4-209ENST00000473421 IGKV3OR2-268A0A0C4DH90 116 aa7.8□□□□□ -1.16
TRAF4-209ENST00000473421 A0A1B0GUV1 79 aa7.8□□□□□ -1.16
TRAF4-209ENST00000473421 SCO2A0A1W2PP80 73 aa7.8□□□□□ -1.16
TRAF4-209ENST00000473421 MAP1LC3B2A6NCE7 125 aa7.8□□□□□ -1.16
TRAF4-209ENST00000473421 ARPC5O15511 151 aa7.8□□□□□ -1.16
TRAF4-209ENST00000473421 PAGE4O60829 102 aa7.8□□□□□ -1.16
TRAF4-209ENST00000473421 NDUFS6O75380 124 aaKnown RBP7.8□□□□□ -1.16
TRAF4-209ENST00000473421 AKR1C3P42330 323 aa7.8□□□□□ -1.16
TRAF4-209ENST00000473421 LINC00526Q96FQ7 95 aa7.8□□□□□ -1.16
TRAF4-209ENST00000473421 TMEM243Q9BU79 118 aa7.8□□□□□ -1.16
TRAF4-209ENST00000473421 MAP1LC3BQ9GZQ8 125 aa7.8□□□□□ -1.16
TRAF4-209ENST00000473421 FXYD6-FXYD2A0A087WZ82 144 aa7.79□□□□□ -1.16
TRAF4-209ENST00000473421 KANTRA0A1W2PQU2 76 aa7.79□□□□□ -1.16
TRAF4-209ENST00000473421 MGPP08493 103 aa7.79□□□□□ -1.16
TRAF4-209ENST00000473421 CXCL1P09341 107 aa7.79□□□□□ -1.16
TRAF4-209ENST00000473421 SPINK6Q6UWN8 80 aa7.79□□□□□ -1.16
TRAF4-209ENST00000473421 KCNRGQ8N5I3 272 aa7.79□□□□□ -1.16
TRAF4-209ENST00000473421 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.79□□□□□ -1.16
TRAF4-209ENST00000473421 RAB19A4D1S5 217 aa7.78□□□□□ -1.16
TRAF4-209ENST00000473421 BCL2L11O43521 198 aa7.78□□□□□ -1.16
TRAF4-209ENST00000473421 BAGE2Q86Y30 109 aa7.78□□□□□ -1.16
TRAF4-209ENST00000473421 CYTL1Q9NRR1 136 aa7.78□□□□□ -1.16
TRAF4-209ENST00000473421 BORCS7-ASMTA0A0B4J1R7 106 aa7.77□□□□□ -1.17
TRAF4-209ENST00000473421 A0A1B0GV50 99 aa7.77□□□□□ -1.17
TRAF4-209ENST00000473421 EIF5AP63241 154 aaKnown RBP7.77□□□□□ -1.17
TRAF4-209ENST00000473421 AKR1C8PQ5T2L2 129 aa7.77□□□□□ -1.17
TRAF4-209ENST00000473421 STOML3Q8TAV4 291 aa7.77□□□□□ -1.17
TRAF4-209ENST00000473421 AP1S3Q96PC3 154 aa7.77□□□□□ -1.17
TRAF4-209ENST00000473421 SMIM17P0DL12 118 aa7.76□□□□□ -1.17
TRAF4-209ENST00000473421 SULT1A2P50226 295 aa7.76□□□□□ -1.17
TRAF4-209ENST00000473421 ALKAL2Q6UX46 152 aa7.76□□□□□ -1.17
TRAF4-209ENST00000473421 KRTAP9-2Q9BYQ4 174 aa7.76□□□□□ -1.17
TRAF4-209ENST00000473421 GVQW2A0A096LPI5 108 aaPredicted RBP7.75□□□□□ -1.17
TRAF4-209ENST00000473421 IGLC6P0CF74 106 aa7.75□□□□□ -1.17
TRAF4-209ENST00000473421 REG3GQ6UW15 175 aa7.75□□□□□ -1.17
TRAF4-209ENST00000473421 CHCHD10Q8WYQ3 142 aaPredicted RBP7.75□□□□□ -1.17
TRAF4-209ENST00000473421 TPPP3Q9BW30 176 aa7.75□□□□□ -1.17
TRAF4-209ENST00000473421 H7C1H1 209 aa7.74□□□□□ -1.17
TRAF4-209ENST00000473421 FOXI1Q12951 378 aa7.74□□□□□ -1.17
TRAF4-209ENST00000473421 EIF5AL1Q6IS14 154 aaKnown RBP7.74□□□□□ -1.17
TRAF4-209ENST00000473421 RASL11AQ6T310 242 aa7.74□□□□□ -1.17
TRAF4-209ENST00000473421 SVBPQ8N300 66 aa7.74□□□□□ -1.17
TRAF4-209ENST00000473421 SCO1O75880 301 aa7.73□□□□□ -1.17
TRAF4-209ENST00000473421 AMTP48728 403 aa7.73□□□□□ -1.17
TRAF4-209ENST00000473421 CFAP161Q6P656 301 aa7.73□□□□□ -1.17
TRAF4-209ENST00000473421 PGLYRP4Q96LB8 373 aa7.73□□□□□ -1.17
TRAF4-209ENST00000473421 TCEAL7Q9BRU2 100 aa7.73□□□□□ -1.17
TRAF4-209ENST00000473421 TRAV26-2A0A0B4J265 109 aa7.72□□□□□ -1.17
TRAF4-209ENST00000473421 A0A1W2PNN7 141 aa7.72□□□□□ -1.17
TRAF4-209ENST00000473421 H2AFB1P0C5Y9 115 aa7.72□□□□□ -1.17
TRAF4-209ENST00000473421 Q6ZRP5 223 aa7.72□□□□□ -1.17
TRAF4-209ENST00000473421 FER1L6-AS1Q8NA97 138 aa7.72□□□□□ -1.17
TRAF4-209ENST00000473421 NIT2Q9NQR4 276 aa7.72□□□□□ -1.17
TRAF4-209ENST00000473421 CARHSP1Q9Y2V2 147 aaKnown RBP7.72□□□□□ -1.17
TRAF4-209ENST00000473421 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.71□□□□□ -1.18
TRAF4-209ENST00000473421 IGKV2-29A2NJV5 120 aaPredicted RBP7.71□□□□□ -1.18
TRAF4-209ENST00000473421 UBE2L6O14933 153 aa7.71□□□□□ -1.18
TRAF4-209ENST00000473421 RPL35P42766 123 aaKnown RBP7.71□□□□□ -1.18
TRAF4-209ENST00000473421 SFT2D1Q8WV19 159 aa7.71□□□□□ -1.18
TRAF4-209ENST00000473421 SNAPINO95295 136 aa7.7□□□□□ -1.18
TRAF4-209ENST00000473421 APOC3P02656 99 aa7.7□□□□□ -1.18
TRAF4-209ENST00000473421 S100A9P06702 114 aaKnown RBP7.7□□□□□ -1.18
TRAF4-209ENST00000473421 NTF3P20783 257 aa7.7□□□□□ -1.18
TRAF4-209ENST00000473421 CCL20P78556 96 aa7.7□□□□□ -1.18
TRAF4-209ENST00000473421 COTL1Q14019 142 aa7.7□□□□□ -1.18
TRAF4-209ENST00000473421 C10orf91Q5T1B1 145 aa7.7□□□□□ -1.18
TRAF4-209ENST00000473421 LYZL1Q6UWQ5 148 aa7.7□□□□□ -1.18
TRAF4-209ENST00000473421 PRR26Q8N8Z3 221 aa7.7□□□□□ -1.18
TRAF4-209ENST00000473421 GATD1Q8NB37 220 aa7.7□□□□□ -1.18
TRAF4-209ENST00000473421 OR2D3Q8NGH3 330 aa7.7□□□□□ -1.18
TRAF4-209ENST00000473421 MBD3L1Q8WWY6 194 aa7.7□□□□□ -1.18
TRAF4-209ENST00000473421 RPL39LQ96EH5 51 aaKnown RBP7.7□□□□□ -1.18
TRAF4-209ENST00000473421 TMEM218A2RU14 115 aa7.69□□□□□ -1.18
TRAF4-209ENST00000473421 C19orf71A6NCJ1 209 aa7.69□□□□□ -1.18
TRAF4-209ENST00000473421 XCL1P47992 114 aa7.69□□□□□ -1.18
TRAF4-209ENST00000473421 FOXA3P55318 350 aaPredicted RBP7.69□□□□□ -1.18
TRAF4-209ENST00000473421 S100A12P80511 92 aa7.69□□□□□ -1.18
TRAF4-209ENST00000473421 FAM213BQ8TBF2 198 aa7.69□□□□□ -1.18
TRAF4-209ENST00000473421 SEC11CQ9BY50 192 aa7.69□□□□□ -1.18
TRAF4-209ENST00000473421 FGF6P10767 208 aa7.68□□□□□ -1.18
TRAF4-209ENST00000473421 RNASEKQ6P5S7 137 aaKnown RBP7.68□□□□□ -1.18
TRAF4-209ENST00000473421 KRTAP11-1Q8IUC1 163 aa7.68□□□□□ -1.18
TRAF4-209ENST00000473421 PSORS1C2Q9UIG4 136 aa7.68□□□□□ -1.18
TRAF4-209ENST00000473421 FAM231BA6NCW3 169 aa7.67□□□□□ -1.18
TRAF4-209ENST00000473421 CCL25O15444 150 aa7.67□□□□□ -1.18
TRAF4-209ENST00000473421 PTTG1IPP53801 180 aa7.67□□□□□ -1.18
TRAF4-209ENST00000473421 CACNG7P62955 275 aa7.67□□□□□ -1.18
TRAF4-209ENST00000473421 BLOC1S1P78537 153 aa7.67□□□□□ -1.18
TRAF4-209ENST00000473421 CENPWQ5EE01 88 aa7.67□□□□□ -1.18
TRAF4-209ENST00000473421 CARD19Q96LW7 228 aa7.67□□□□□ -1.18
TRAF4-209ENST00000473421 TRBV20OR9-2A0A075B6H5 130 aa7.66□□□□□ -1.18
TRAF4-209ENST00000473421 LINC00959A0A1B0GUT2 108 aa7.66□□□□□ -1.18
TRAF4-209ENST00000473421 BCL2P10415 239 aa7.66□□□□□ -1.18
TRAF4-209ENST00000473421 GAGE2BQ13066 116 aa7.66□□□□□ -1.18
TRAF4-209ENST00000473421 AMMECR1LQ6DCA0 310 aa7.66□□□□□ -1.18
TRAF4-209ENST00000473421 BIN3Q9NQY0 253 aa7.66□□□□□ -1.18
TRAF4-209ENST00000473421 LINC00474Q9P2X8 69 aa7.66□□□□□ -1.18
TRAF4-209ENST00000473421 SYCNQ0VAF6 134 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms