RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	RASL11A	Q6T310	242 aa		5.81	□□□□□ -1.48
CHEK2-223	ENST00000472807	DEFB104A	Q8WTQ1	72 aa		5.81	□□□□□ -1.48
CHEK2-223	ENST00000472807	TMEM243	Q9BU79	118 aa		5.81	□□□□□ -1.48
CHEK2-223	ENST00000472807	RPP21	Q9H633	154 aa	Known RBP	5.81	□□□□□ -1.48
CHEK2-223	ENST00000472807	HMCN2	Q8NDA2	5059 aa		5.8	□□□□□ -1.48
CHEK2-223	ENST00000472807	UBE2L6	O14933	153 aa		5.8	□□□□□ -1.48
CHEK2-223	ENST00000472807	NTF3	P20783	257 aa		5.8	□□□□□ -1.48
CHEK2-223	ENST00000472807	REG3A	Q06141	175 aa		5.8	□□□□□ -1.48
CHEK2-223	ENST00000472807	TWIST1	Q15672	202 aa		5.8	□□□□□ -1.48
CHEK2-223	ENST00000472807	WDR73	Q6P4I2	378 aa		5.8	□□□□□ -1.48
CHEK2-223	ENST00000472807	C9orf62	Q8N4C0	152 aa		5.8	□□□□□ -1.48
CHEK2-223	ENST00000472807	NUDT10	Q8NFP7	164 aa		5.8	□□□□□ -1.48
CHEK2-223	ENST00000472807	NUDT11	Q96G61	164 aa		5.8	□□□□□ -1.48
CHEK2-223	ENST00000472807	PGLYRP4	Q96LB8	373 aa		5.8	□□□□□ -1.48
CHEK2-223	ENST00000472807	NIT2	Q9NQR4	276 aa		5.8	□□□□□ -1.48
CHEK2-223	ENST00000472807	PRSS1	P07477	247 aa		5.79	□□□□□ -1.48
CHEK2-223	ENST00000472807	COTL1	Q14019	142 aa		5.79	□□□□□ -1.48
CHEK2-223	ENST00000472807	DGAT2L7P	Q6IED9	249 aa		5.79	□□□□□ -1.48
CHEK2-223	ENST00000472807	SMIM15	Q7Z3B0	74 aa		5.79	□□□□□ -1.48
CHEK2-223	ENST00000472807	CLRN3	Q8NCR9	226 aa		5.79	□□□□□ -1.48
CHEK2-223	ENST00000472807	CIRBP-AS1	Q8TBR5	109 aa		5.79	□□□□□ -1.48
CHEK2-223	ENST00000472807	CNFN	Q9BYD5	112 aa		5.79	□□□□□ -1.48
CHEK2-223	ENST00000472807	RNASE7	Q9H1E1	156 aa	Known RBP	5.79	□□□□□ -1.48
CHEK2-223	ENST00000472807	IGLV10-54	A0A075B6I4	117 aa		5.78	□□□□□ -1.48
CHEK2-223	ENST00000472807	TRAV8-4	A0A0B4J246	113 aa		5.78	□□□□□ -1.48
CHEK2-223	ENST00000472807		A0A1B0GUV1	79 aa		5.78	□□□□□ -1.48
CHEK2-223	ENST00000472807		K7EN84	100 aa		5.78	□□□□□ -1.48
CHEK2-223	ENST00000472807	AMT	P48728	403 aa		5.78	□□□□□ -1.48
CHEK2-223	ENST00000472807	KRTAP26-1	Q6PEX3	210 aa		5.78	□□□□□ -1.48
CHEK2-223	ENST00000472807	C20orf203	Q8NBC4	194 aa		5.78	□□□□□ -1.48
CHEK2-223	ENST00000472807	IGLV4-60	A0A075B6I1	120 aa		5.77	□□□□□ -1.49
CHEK2-223	ENST00000472807	TRAV26-2	A0A0B4J265	109 aa		5.77	□□□□□ -1.49
CHEK2-223	ENST00000472807	hDV102S1	A0JD36	115 aa		5.77	□□□□□ -1.49
CHEK2-223	ENST00000472807	KRTAP29-1	A8MX34	341 aa	Predicted RBP	5.77	□□□□□ -1.49
CHEK2-223	ENST00000472807	TMEM250	H0YL14	139 aa		5.77	□□□□□ -1.49
CHEK2-223	ENST00000472807	BLOC1S1	P78537	153 aa		5.77	□□□□□ -1.49
CHEK2-223	ENST00000472807	OCC1	Q8TAD7	63 aa		5.77	□□□□□ -1.49
CHEK2-223	ENST00000472807	GATC	O43716	136 aa	Known RBP	5.76	□□□□□ -1.49
CHEK2-223	ENST00000472807	CEBPG	P53567	150 aa		5.76	□□□□□ -1.49
CHEK2-223	ENST00000472807	CNBP	P62633	177 aa	Known RBP	5.76	□□□□□ -1.49
CHEK2-223	ENST00000472807	TEX261	Q6UWH6	196 aa		5.76	□□□□□ -1.49
CHEK2-223	ENST00000472807	ALKAL2	Q6UX46	152 aa		5.76	□□□□□ -1.49
CHEK2-223	ENST00000472807	C9orf163	Q8N9P6	203 aa		5.76	□□□□□ -1.49
CHEK2-223	ENST00000472807	GATD1	Q8NB37	220 aa		5.76	□□□□□ -1.49
CHEK2-223	ENST00000472807	AP5S1	Q9NUS5	200 aa		5.76	□□□□□ -1.49
CHEK2-223	ENST00000472807	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	5.75	□□□□□ -1.49
CHEK2-223	ENST00000472807		A8MWL6	223 aa		5.75	□□□□□ -1.49
CHEK2-223	ENST00000472807	APCS	P02743	223 aa		5.75	□□□□□ -1.49
CHEK2-223	ENST00000472807	RPL37A	P61513	92 aa	Known RBP	5.75	□□□□□ -1.49
CHEK2-223	ENST00000472807	AMMECR1L	Q6DCA0	310 aa		5.75	□□□□□ -1.49
CHEK2-223	ENST00000472807	FAM231D	Q6ZW35	169 aa		5.75	□□□□□ -1.49
CHEK2-223	ENST00000472807	GTSF1	Q8WW33	167 aa		5.75	□□□□□ -1.49
CHEK2-223	ENST00000472807	BORCS7	Q96B45	105 aa		5.75	□□□□□ -1.49
CHEK2-223	ENST00000472807	GFRA4	Q9GZZ7	299 aa		5.75	□□□□□ -1.49
CHEK2-223	ENST00000472807	IGHV3-64	A0A075B6Q5	118 aa		5.74	□□□□□ -1.49
CHEK2-223	ENST00000472807	IGKV3OR2-268	A0A0C4DH90	116 aa		5.74	□□□□□ -1.49
CHEK2-223	ENST00000472807	NCR2	O95944	276 aa		5.74	□□□□□ -1.49
CHEK2-223	ENST00000472807	KRTAP10-4	P60372	401 aa	Predicted RBP	5.74	□□□□□ -1.49
CHEK2-223	ENST00000472807	CT83	Q5H943	113 aa		5.74	□□□□□ -1.49
CHEK2-223	ENST00000472807	RPL39L	Q96EH5	51 aa	Known RBP	5.74	□□□□□ -1.49
CHEK2-223	ENST00000472807	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	5.74	□□□□□ -1.49
CHEK2-223	ENST00000472807	GAGE12H	A6NDE8	117 aa		5.73	□□□□□ -1.49
CHEK2-223	ENST00000472807	SDHAF1	A6NFY7	115 aa		5.73	□□□□□ -1.49
CHEK2-223	ENST00000472807		H7C423	109 aa		5.73	□□□□□ -1.49
CHEK2-223	ENST00000472807	FOXA3	P55318	350 aa	Predicted RBP	5.73	□□□□□ -1.49
CHEK2-223	ENST00000472807	RNASEK	Q6P5S7	137 aa	Known RBP	5.73	□□□□□ -1.49
CHEK2-223	ENST00000472807	CFAP161	Q6P656	301 aa		5.73	□□□□□ -1.49
CHEK2-223	ENST00000472807	SDIM1	Q6ZPB5	146 aa		5.73	□□□□□ -1.49
CHEK2-223	ENST00000472807	LYPD6B	Q8NI32	183 aa		5.73	□□□□□ -1.49
CHEK2-223	ENST00000472807	SMIM7	Q9BQ49	75 aa		5.73	□□□□□ -1.49
CHEK2-223	ENST00000472807	KRTAP9-9	Q9BYP9	154 aa		5.73	□□□□□ -1.49
CHEK2-223	ENST00000472807	KRTAP9-4	Q9BYQ2	154 aa		5.73	□□□□□ -1.49
CHEK2-223	ENST00000472807	EIF5A2	Q9GZV4	153 aa	Known RBP	5.73	□□□□□ -1.49
CHEK2-223	ENST00000472807	UBR4	Q5T4S7	5183 aa		5.73	□□□□□ -1.49
CHEK2-223	ENST00000472807	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	5.72	□□□□□ -1.49
CHEK2-223	ENST00000472807	IGKV2-29	A2NJV5	120 aa	Predicted RBP	5.72	□□□□□ -1.49
CHEK2-223	ENST00000472807	OXT	P01178	125 aa		5.72	□□□□□ -1.49
CHEK2-223	ENST00000472807	FGF6	P10767	208 aa		5.72	□□□□□ -1.49
CHEK2-223	ENST00000472807	KRTAP19-1	Q8IUB9	90 aa		5.72	□□□□□ -1.49
CHEK2-223	ENST00000472807	TRBV6-5	A0A0K0K1A5	114 aa		5.71	□□□□□ -1.5
CHEK2-223	ENST00000472807		A0A1B0GUT8	65 aa		5.71	□□□□□ -1.5
CHEK2-223	ENST00000472807	HIGD1C	A8MV81	97 aa		5.71	□□□□□ -1.5
CHEK2-223	ENST00000472807	PANO1	I0J062	215 aa		5.71	□□□□□ -1.5
CHEK2-223	ENST00000472807		I3L3M4	83 aa		5.71	□□□□□ -1.5
CHEK2-223	ENST00000472807	NDUFS6	O75380	124 aa	Known RBP	5.71	□□□□□ -1.5
CHEK2-223	ENST00000472807	ZNF25	P17030	456 aa	Predicted RBP	5.71	□□□□□ -1.5
CHEK2-223	ENST00000472807	PMCH	P20382	165 aa		5.71	□□□□□ -1.5
CHEK2-223	ENST00000472807	CIRBP	Q14011	172 aa	Known RBP	5.71	□□□□□ -1.5
CHEK2-223	ENST00000472807	LINC01551	Q86U37	167 aa		5.71	□□□□□ -1.5
CHEK2-223	ENST00000472807	C15orf56	Q8N910	161 aa		5.71	□□□□□ -1.5
CHEK2-223	ENST00000472807	TSKU	Q8WUA8	353 aa		5.71	□□□□□ -1.5
CHEK2-223	ENST00000472807	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	5.71	□□□□□ -1.5
CHEK2-223	ENST00000472807	DPH3	Q96FX2	82 aa		5.71	□□□□□ -1.5
CHEK2-223	ENST00000472807	RNF185	Q96GF1	192 aa		5.71	□□□□□ -1.5
CHEK2-223	ENST00000472807	TMEM101	Q96IK0	257 aa		5.71	□□□□□ -1.5
CHEK2-223	ENST00000472807	BTF3L4	Q96K17	158 aa		5.71	□□□□□ -1.5
CHEK2-223	ENST00000472807	ST20	Q9HBF5	79 aa		5.71	□□□□□ -1.5
CHEK2-223	ENST00000472807	FAM231B	A6NCW3	169 aa		5.7	□□□□□ -1.5
CHEK2-223	ENST00000472807	ZNF727	A8MUV8	499 aa		5.7	□□□□□ -1.5
CHEK2-223	ENST00000472807	NDUFA5	Q16718	116 aa		5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 88 ms