RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 ARV1Q9H2C2 271 aa3.66□□□□□ -1.82
HDAC3-206ENST00000471968 PRR34Q9NV39 138 aa3.66□□□□□ -1.82
HDAC3-206ENST00000471968 TMEM242Q9NWH2 141 aa3.66□□□□□ -1.82
HDAC3-206ENST00000471968 HIGD1AQ9Y241 93 aa3.66□□□□□ -1.82
HDAC3-206ENST00000471968 H0YIZ8 118 aa3.65□□□□□ -1.83
HDAC3-206ENST00000471968 MRPS12O15235 138 aaKnown RBP3.65□□□□□ -1.83
HDAC3-206ENST00000471968 OR5G3P0C626 314 aa3.65□□□□□ -1.83
HDAC3-206ENST00000471968 GZMBP10144 247 aa3.65□□□□□ -1.83
HDAC3-206ENST00000471968 G0S2P27469 103 aa3.65□□□□□ -1.83
HDAC3-206ENST00000471968 HBG1P69891 147 aa3.65□□□□□ -1.83
HDAC3-206ENST00000471968 HBG2P69892 147 aa3.65□□□□□ -1.83
HDAC3-206ENST00000471968 PNRC1Q12796 327 aaPredicted RBP3.65□□□□□ -1.83
HDAC3-206ENST00000471968 RPL7L1Q6DKI1 246 aaKnown RBP3.65□□□□□ -1.83
HDAC3-206ENST00000471968 FAM159AQ6UWV7 190 aa3.65□□□□□ -1.83
HDAC3-206ENST00000471968 FP248Q71RG6 208 aaPredicted RBP3.65□□□□□ -1.83
HDAC3-206ENST00000471968 KRTAP11-1Q8IUC1 163 aa3.65□□□□□ -1.83
HDAC3-206ENST00000471968 SNHG12Q9BXW3 62 aa3.65□□□□□ -1.83
HDAC3-206ENST00000471968 EIF5A2Q9GZV4 153 aaKnown RBP3.65□□□□□ -1.83
HDAC3-206ENST00000471968 PRO1933Q9H354 126 aa3.65□□□□□ -1.83
HDAC3-206ENST00000471968 SLC39A9Q9NUM3 307 aa3.65□□□□□ -1.83
HDAC3-206ENST00000471968 NAGKQ9UJ70 344 aa3.65□□□□□ -1.83
HDAC3-206ENST00000471968 PKIGQ9Y2B9 76 aa3.65□□□□□ -1.83
HDAC3-206ENST00000471968 TRBV24-1A0A075B6N3 115 aa3.64□□□□□ -1.83
HDAC3-206ENST00000471968 TMEM238LA0A1B0GVL6 79 aa3.64□□□□□ -1.83
HDAC3-206ENST00000471968 AGPAT2O15120 278 aa3.64□□□□□ -1.83
HDAC3-206ENST00000471968 COX7A2P2O60397 106 aa3.64□□□□□ -1.83
HDAC3-206ENST00000471968 HYPMO75409 117 aa3.64□□□□□ -1.83
HDAC3-206ENST00000471968 LINC00869P0C866 280 aa3.64□□□□□ -1.83
HDAC3-206ENST00000471968 TRGC1P0CF51 173 aa3.64□□□□□ -1.83
HDAC3-206ENST00000471968 CAMLGP49069 296 aa3.64□□□□□ -1.83
HDAC3-206ENST00000471968 PTTG1IPP53801 180 aa3.64□□□□□ -1.83
HDAC3-206ENST00000471968 FGF8P55075 233 aaPredicted RBP3.64□□□□□ -1.83
HDAC3-206ENST00000471968 TAS2R30P59541 319 aa3.64□□□□□ -1.83
HDAC3-206ENST00000471968 RANP62826 216 aaKnown RBP3.64□□□□□ -1.83
HDAC3-206ENST00000471968 BAXQ07812 192 aa3.64□□□□□ -1.83
HDAC3-206ENST00000471968 SLC38A11Q08AI6 406 aa3.64□□□□□ -1.83
HDAC3-206ENST00000471968 GAGE2BQ13066 116 aa3.64□□□□□ -1.83
HDAC3-206ENST00000471968 IL15RAQ13261 267 aa3.64□□□□□ -1.83
HDAC3-206ENST00000471968 C9orf116Q5BN46 136 aaPredicted RBP3.64□□□□□ -1.83
HDAC3-206ENST00000471968 CYP2G1PQ6ZSU1 146 aa3.64□□□□□ -1.83
HDAC3-206ENST00000471968 TVP23CQ96ET8 276 aa3.64□□□□□ -1.83
HDAC3-206ENST00000471968 KCNS1Q96KK3 526 aa3.64□□□□□ -1.83
HDAC3-206ENST00000471968 CTDSP1Q9GZU7 261 aa3.64□□□□□ -1.83
HDAC3-206ENST00000471968 NPVFQ9HCQ7 196 aa3.64□□□□□ -1.83
HDAC3-206ENST00000471968 OR5AC2Q9NZP5 309 aa3.64□□□□□ -1.83
HDAC3-206ENST00000471968 PXMP4Q9Y6I8 212 aa3.64□□□□□ -1.83
HDAC3-206ENST00000471968 H3BQ15 152 aa3.63□□□□□ -1.83
HDAC3-206ENST00000471968 M0R3E3 92 aa3.63□□□□□ -1.83
HDAC3-206ENST00000471968 GNRH2O43555 120 aa3.63□□□□□ -1.83
HDAC3-206ENST00000471968 TRGC2P03986 189 aa3.63□□□□□ -1.83
HDAC3-206ENST00000471968 CXCL1P09341 107 aa3.63□□□□□ -1.83
HDAC3-206ENST00000471968 RPL12P30050 165 aaKnown RBP3.63□□□□□ -1.83
HDAC3-206ENST00000471968 TAGLN2P37802 199 aaKnown RBP3.63□□□□□ -1.83
HDAC3-206ENST00000471968 ID3Q02535 119 aa3.63□□□□□ -1.83
HDAC3-206ENST00000471968 RAB32Q13637 225 aa3.63□□□□□ -1.83
HDAC3-206ENST00000471968 TMEM241Q24JQ0 296 aa3.63□□□□□ -1.83
HDAC3-206ENST00000471968 PCOTHQ58A44 107 aa3.63□□□□□ -1.83
HDAC3-206ENST00000471968 XP32Q5T750 250 aa3.63□□□□□ -1.83
HDAC3-206ENST00000471968 SMIM15Q7Z3B0 74 aa3.63□□□□□ -1.83
HDAC3-206ENST00000471968 C14orf178Q8N769 122 aaPredicted RBP3.63□□□□□ -1.83
HDAC3-206ENST00000471968 OR1L4Q8NGR5 311 aa3.63□□□□□ -1.83
HDAC3-206ENST00000471968 OR2G3Q8NGZ4 309 aa3.63□□□□□ -1.83
HDAC3-206ENST00000471968 TMEM18Q96B42 140 aa3.63□□□□□ -1.83
HDAC3-206ENST00000471968 KCNIP2Q9NS61 270 aa3.63□□□□□ -1.83
HDAC3-206ENST00000471968 CHTOPQ9Y3Y2 248 aaKnown RBP3.63□□□□□ -1.83
HDAC3-206ENST00000471968 UBE2L5PA0A1B0GUS4 154 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 FNDC10F2Z333 226 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 C17orf112F2Z3M2 114 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 CST7O76096 145 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 MBPP02686 304 aaPredicted RBP3.62□□□□□ -1.83
HDAC3-206ENST00000471968 PPBPP02775 128 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 NPSP0C0P6 89 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 RBX1P62877 108 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 REG3AQ06141 175 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 ZNF266Q14584 549 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 ATP6V1FQ16864 119 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 PDZD11Q5EBL8 140 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 ZNF506Q5JVG8 444 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 COL5A1-AS1Q5SY13 56 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 C10orf113Q5VZT2 155 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 CFAP161Q6P656 301 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 BPIFA4PQ86YQ2 179 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 OR2D3Q8NGH3 330 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 OR10G7Q8NGN6 311 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 ORAOV1Q8WV07 137 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 BTF3L4Q96K17 158 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 KIR2DL4Q99706 377 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 CHCHD5Q9BSY4 110 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 KRTAP9-3Q9BYQ3 159 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 ZFP30Q9Y2G7 519 aa3.62□□□□□ -1.83
HDAC3-206ENST00000471968 TGIF2-C20orf24A0A0A6YYL0 155 aa3.61□□□□□ -1.83
HDAC3-206ENST00000471968 HSBP1L1C9JCN9 74 aa3.61□□□□□ -1.83
HDAC3-206ENST00000471968 SRP19P09132 144 aaKnown RBP3.61□□□□□ -1.83
HDAC3-206ENST00000471968 RPS20P60866 119 aaKnown RBP3.61□□□□□ -1.83
HDAC3-206ENST00000471968 KRTAP13-2Q52LG2 175 aa3.61□□□□□ -1.83
HDAC3-206ENST00000471968 TMEM78Q5T7P6 136 aa3.61□□□□□ -1.83
HDAC3-206ENST00000471968 TMEM14EPQ6UXP3 125 aa3.61□□□□□ -1.83
HDAC3-206ENST00000471968 LINC00305Q7Z4B0 112 aa3.61□□□□□ -1.83
HDAC3-206ENST00000471968 SCGB1C1Q8TD33 95 aa3.61□□□□□ -1.83
HDAC3-206ENST00000471968 IMMP2LQ96T52 175 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms