RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 IGLV4-60A0A075B6I1 120 aa13.63□□□□□ -0.23
SREBF1-210ENST00000471445 A0A1B0GVG6 124 aa13.63□□□□□ -0.23
SREBF1-210ENST00000471445 A8MWL6 223 aa13.63□□□□□ -0.23
SREBF1-210ENST00000471445 COTL1Q14019 142 aa13.63□□□□□ -0.23
SREBF1-210ENST00000471445 SCXQ7RTU7 201 aa13.63□□□□□ -0.23
SREBF1-210ENST00000471445 SMIM7Q9BQ49 75 aa13.63□□□□□ -0.23
SREBF1-210ENST00000471445 EIF5A2Q9GZV4 153 aaKnown RBP13.63□□□□□ -0.23
SREBF1-210ENST00000471445 AMTP48728 403 aa13.62□□□□□ -0.23
SREBF1-210ENST00000471445 FOXA3P55318 350 aaPredicted RBP13.62□□□□□ -0.23
SREBF1-210ENST00000471445 LINC01551Q86U37 167 aa13.62□□□□□ -0.23
SREBF1-210ENST00000471445 GFRA4Q9GZZ7 299 aa13.62□□□□□ -0.23
SREBF1-210ENST00000471445 SMIM15Q7Z3B0 74 aa13.61□□□□□ -0.23
SREBF1-210ENST00000471445 DEFB104AQ8WTQ1 72 aa13.61□□□□□ -0.23
SREBF1-210ENST00000471445 RPL39LQ96EH5 51 aaKnown RBP13.61□□□□□ -0.23
SREBF1-210ENST00000471445 PRSS1P07477 247 aa13.6□□□□□ -0.23
SREBF1-210ENST00000471445 SRP19P09132 144 aaKnown RBP13.6□□□□□ -0.23
SREBF1-210ENST00000471445 LINC00528Q8N1L1 170 aa13.6□□□□□ -0.23
SREBF1-210ENST00000471445 IGLV10-54A0A075B6I4 117 aa13.59□□□□□ -0.23
SREBF1-210ENST00000471445 TRAV8-4A0A0B4J246 113 aa13.59□□□□□ -0.23
SREBF1-210ENST00000471445 UBE2L6O14933 153 aa13.59□□□□□ -0.23
SREBF1-210ENST00000471445 CHAC1Q9BUX1 264 aa13.59□□□□□ -0.23
SREBF1-210ENST00000471445 FLG2Q5D862 2391 aaPredicted RBP13.58□□□□□ -0.24
SREBF1-210ENST00000471445 ZNF727A8MUV8 499 aa13.58□□□□□ -0.24
SREBF1-210ENST00000471445 TEX261Q6UWH6 196 aa13.58□□□□□ -0.24
SREBF1-210ENST00000471445 TSKUQ8WUA8 353 aa13.58□□□□□ -0.24
SREBF1-210ENST00000471445 NCR2O95944 276 aa13.57□□□□□ -0.24
SREBF1-210ENST00000471445 OSTCQ9NRP0 149 aa13.57□□□□□ -0.24
SREBF1-210ENST00000471445 MYCBP2O75592 4640 aa13.56□□□□□ -0.24
SREBF1-210ENST00000471445 HIGD1CA8MV81 97 aa13.56□□□□□ -0.24
SREBF1-210ENST00000471445 PLA2G1BP04054 148 aaKnown RBP13.56□□□□□ -0.24
SREBF1-210ENST00000471445 DGAT2L7PQ6IED9 249 aa13.56□□□□□ -0.24
SREBF1-210ENST00000471445 BORCS7Q96B45 105 aa13.56□□□□□ -0.24
SREBF1-210ENST00000471445 DMBT1Q9UGM3 2413 aaPredicted RBP13.56□□□□□ -0.24
SREBF1-210ENST00000471445 FAM231BA6NCW3 169 aa13.55□□□□□ -0.24
SREBF1-210ENST00000471445 SDHAF1A6NFY7 115 aa13.55□□□□□ -0.24
SREBF1-210ENST00000471445 CIRBP-AS1Q8TBR5 109 aa13.55□□□□□ -0.24
SREBF1-210ENST00000471445 TRBV6-5A0A0K0K1A5 114 aa13.54□□□□□ -0.24
SREBF1-210ENST00000471445 A0A1B0GUT8 65 aa13.54□□□□□ -0.24
SREBF1-210ENST00000471445 APCSP02743 223 aa13.54□□□□□ -0.24
SREBF1-210ENST00000471445 C9orf163Q8N9P6 203 aa13.54□□□□□ -0.24
SREBF1-210ENST00000471445 CLRN3Q8NCR9 226 aa13.54□□□□□ -0.24
SREBF1-210ENST00000471445 TMEM191AQ9H0A3 160 aa13.53□□□□□ -0.24
SREBF1-210ENST00000471445 V9GYV3 84 aa13.53□□□□□ -0.24
SREBF1-210ENST00000471445 H7C423 109 aa13.52□□□□□ -0.25
SREBF1-210ENST00000471445 GAS8-AS1O95177 125 aa13.52□□□□□ -0.25
SREBF1-210ENST00000471445 ISOC2Q96AB3 205 aa13.52□□□□□ -0.25
SREBF1-210ENST00000471445 RNF185Q96GF1 192 aa13.52□□□□□ -0.25
SREBF1-210ENST00000471445 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.51□□□□□ -0.25
SREBF1-210ENST00000471445 IGKV2-29A2NJV5 120 aaPredicted RBP13.51□□□□□ -0.25
SREBF1-210ENST00000471445 CNBPP62633 177 aaKnown RBP13.51□□□□□ -0.25
SREBF1-210ENST00000471445 I3L3M4 83 aa13.5□□□□□ -0.25
SREBF1-210ENST00000471445 FAM74A3Q4VXF1 159 aa13.5□□□□□ -0.25
SREBF1-210ENST00000471445 KRTAP10-4P60372 401 aaPredicted RBP13.49□□□□□ -0.25
SREBF1-210ENST00000471445 RPL23P62829 140 aaKnown RBP13.49□□□□□ -0.25
SREBF1-210ENST00000471445 AMMECR1LQ6DCA0 310 aa13.49□□□□□ -0.25
SREBF1-210ENST00000471445 hDV102S1A0JD36 115 aa13.48□□□□□ -0.25
SREBF1-210ENST00000471445 C9JQL5 133 aa13.48□□□□□ -0.25
SREBF1-210ENST00000471445 FGF6P10767 208 aa13.48□□□□□ -0.25
SREBF1-210ENST00000471445 RAB4AP20338 218 aa13.48□□□□□ -0.25
SREBF1-210ENST00000471445 RPS10P46783 165 aaKnown RBP13.48□□□□□ -0.25
SREBF1-210ENST00000471445 TMEM241Q24JQ0 296 aa13.48□□□□□ -0.25
SREBF1-210ENST00000471445 RNASEKQ6P5S7 137 aaKnown RBP13.48□□□□□ -0.25
SREBF1-210ENST00000471445 AMN1Q8IY45 258 aa13.48□□□□□ -0.25
SREBF1-210ENST00000471445 NUP35Q8NFH5 326 aa13.48□□□□□ -0.25
SREBF1-210ENST00000471445 MRAP2Q96G30 205 aa13.48□□□□□ -0.25
SREBF1-210ENST00000471445 ST20Q9HBF5 79 aa13.48□□□□□ -0.25
SREBF1-210ENST00000471445 TSHBP01222 138 aa13.47□□□□□ -0.25
SREBF1-210ENST00000471445 ESDP10768 282 aa13.47□□□□□ -0.25
SREBF1-210ENST00000471445 ZNF25P17030 456 aaPredicted RBP13.47□□□□□ -0.25
SREBF1-210ENST00000471445 PMCHP20382 165 aa13.47□□□□□ -0.25
SREBF1-210ENST00000471445 TMEM242Q9NWH2 141 aa13.47□□□□□ -0.25
SREBF1-210ENST00000471445 IGKV3OR2-268A0A0C4DH90 116 aa13.46□□□□□ -0.25
SREBF1-210ENST00000471445 GAGE12HA6NDE8 117 aa13.46□□□□□ -0.25
SREBF1-210ENST00000471445 POLR2KP53803 58 aaKnown RBP13.46□□□□□ -0.25
SREBF1-210ENST00000471445 RIGQ13278 110 aa13.46□□□□□ -0.25
SREBF1-210ENST00000471445 C15orf56Q8N910 161 aa13.46□□□□□ -0.25
SREBF1-210ENST00000471445 NAT8Q9UHE5 227 aa13.46□□□□□ -0.25
SREBF1-210ENST00000471445 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.46□□□□□ -0.25
SREBF1-210ENST00000471445 SRRM2Q9UQ35 2752 aaKnown RBP13.46□□□□□ -0.26
SREBF1-210ENST00000471445 SRSF3P84103 164 aaKnown RBP13.45□□□□□ -0.26
SREBF1-210ENST00000471445 ADIRFQ15847 76 aa13.45□□□□□ -0.26
SREBF1-210ENST00000471445 SDIM1Q6ZPB5 146 aa13.45□□□□□ -0.26
SREBF1-210ENST00000471445 AP5S1Q9NUS5 200 aa13.45□□□□□ -0.26
SREBF1-210ENST00000471445 NAT8BQ9UHF3 227 aa13.45□□□□□ -0.26
SREBF1-210ENST00000471445 TRBV27A0A0K0K1C4 114 aa13.44□□□□□ -0.26
SREBF1-210ENST00000471445 PANO1I0J062 215 aa13.44□□□□□ -0.26
SREBF1-210ENST00000471445 SLPIP03973 132 aa13.44□□□□□ -0.26
SREBF1-210ENST00000471445 CHCHD10Q8WYQ3 142 aaPredicted RBP13.44□□□□□ -0.26
SREBF1-210ENST00000471445 PEA15Q15121 130 aa13.43□□□□□ -0.26
SREBF1-210ENST00000471445 OR5A1Q8NGJ0 315 aa13.43□□□□□ -0.26
SREBF1-210ENST00000471445 SMDT1Q9H4I9 107 aa13.43□□□□□ -0.26
SREBF1-210ENST00000471445 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.42□□□□□ -0.26
SREBF1-210ENST00000471445 CIRBPQ14011 172 aaKnown RBP13.42□□□□□ -0.26
SREBF1-210ENST00000471445 SMIM27A0A1W2PRY6 76 aa13.41□□□□□ -0.26
SREBF1-210ENST00000471445 SMKR1H3BMG3 65 aa13.41□□□□□ -0.26
SREBF1-210ENST00000471445 CFAP161Q6P656 301 aa13.41□□□□□ -0.26
SREBF1-210ENST00000471445 NRACQ8N912 160 aa13.41□□□□□ -0.26
SREBF1-210ENST00000471445 BTF3L4Q96K17 158 aa13.41□□□□□ -0.26
SREBF1-210ENST00000471445 IGHV3-64A0A075B6Q5 118 aa13.4□□□□□ -0.26
SREBF1-210ENST00000471445 C7orf77A4D0Y5 90 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms