RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 K7EMT4 169 aa4.48□□□□□ -1.69
SHQ1-205ENST00000468371 GNRH2O43555 120 aa4.48□□□□□ -1.69
SHQ1-205ENST00000468371 CRYBA4P53673 196 aa4.48□□□□□ -1.69
SHQ1-205ENST00000468371 ZNF876PQ49A33 203 aa4.48□□□□□ -1.69
SHQ1-205ENST00000468371 PAPPA-AS1Q5QFB9 102 aa4.48□□□□□ -1.69
SHQ1-205ENST00000468371 C10orf126Q8N4M7 172 aa4.48□□□□□ -1.69
SHQ1-205ENST00000468371 CSMD1Q96PZ7 3565 aa4.48□□□□□ -1.69
SHQ1-205ENST00000468371 C2orf82Q6UX34 121 aa4.48□□□□□ -1.69
SHQ1-205ENST00000468371 MUC7Q8TAX7 377 aa4.48□□□□□ -1.69
SHQ1-205ENST00000468371 ZNF625Q96I27 306 aaPredicted RBP4.48□□□□□ -1.69
SHQ1-205ENST00000468371 FANCD2OSQ96PS1 177 aa4.48□□□□□ -1.69
SHQ1-205ENST00000468371 TNFRSF18Q9Y5U5 241 aa4.48□□□□□ -1.69
SHQ1-205ENST00000468371 TRAV8-3A0A0A6YYJ7 113 aa4.47□□□□□ -1.69
SHQ1-205ENST00000468371 ZFP2Q6ZN57 461 aa4.47□□□□□ -1.69
SHQ1-205ENST00000468371 RNF152Q8N8N0 203 aa4.47□□□□□ -1.69
SHQ1-205ENST00000468371 NTN5Q8WTR8 489 aaPredicted RBP4.47□□□□□ -1.69
SHQ1-205ENST00000468371 SPANXB1Q9NS25 103 aaPredicted RBP4.47□□□□□ -1.69
SHQ1-205ENST00000468371 SLC25A20O43772 301 aa4.47□□□□□ -1.69
SHQ1-205ENST00000468371 LY6G6CO95867 125 aa4.47□□□□□ -1.69
SHQ1-205ENST00000468371 CTSGP08311 255 aa4.47□□□□□ -1.69
SHQ1-205ENST00000468371 CRIP2P52943 208 aaPredicted RBP4.47□□□□□ -1.69
SHQ1-205ENST00000468371 FOXI1Q12951 378 aa4.47□□□□□ -1.69
SHQ1-205ENST00000468371 RNASE13Q5GAN3 156 aaKnown RBP4.47□□□□□ -1.69
SHQ1-205ENST00000468371 ZNF493Q6ZR52 646 aa4.47□□□□□ -1.69
SHQ1-205ENST00000468371 HIGD1BQ9P298 99 aa4.47□□□□□ -1.69
SHQ1-205ENST00000468371 AGRNO00468 2067 aa4.47□□□□□ -1.69
SHQ1-205ENST00000468371 INS-IGF2F8WCM5 200 aa4.47□□□□□ -1.69
SHQ1-205ENST00000468371 VCYO14598 125 aa4.47□□□□□ -1.69
SHQ1-205ENST00000468371 MT-ATP8P03928 68 aa4.47□□□□□ -1.69
SHQ1-205ENST00000468371 CRYGBP07316 175 aa4.47□□□□□ -1.69
SHQ1-205ENST00000468371 TAL2Q16559 108 aa4.47□□□□□ -1.69
SHQ1-205ENST00000468371 UNQ9165/PRO28630Q6UXU0 137 aa4.47□□□□□ -1.69
SHQ1-205ENST00000468371 PRO1854Q9UHT4 67 aa4.47□□□□□ -1.69
SHQ1-205ENST00000468371 SDHAF1A6NFY7 115 aa4.46□□□□□ -1.69
SHQ1-205ENST00000468371 UFSP1Q6NVU6 142 aa4.46□□□□□ -1.69
SHQ1-205ENST00000468371 C11orf45Q8TAV5 145 aa4.46□□□□□ -1.69
SHQ1-205ENST00000468371 TRAV12-2A0A075B6T6 113 aa4.46□□□□□ -1.7
SHQ1-205ENST00000468371 KNCNA6PVL3 124 aa4.46□□□□□ -1.7
SHQ1-205ENST00000468371 M0R2P5 195 aa4.46□□□□□ -1.7
SHQ1-205ENST00000468371 RPL39P62891 51 aaKnown RBP4.46□□□□□ -1.7
SHQ1-205ENST00000468371 CIRBPQ14011 172 aaKnown RBP4.46□□□□□ -1.7
SHQ1-205ENST00000468371 MORN3Q6PF18 240 aaPredicted RBP4.46□□□□□ -1.7
SHQ1-205ENST00000468371 BSNQ9UPA5 3926 aa4.46□□□□□ -1.7
SHQ1-205ENST00000468371 E9PLD3 99 aa4.46□□□□□ -1.7
SHQ1-205ENST00000468371 C3orf84H3BNL1 204 aa4.46□□□□□ -1.7
SHQ1-205ENST00000468371 PMVKQ15126 192 aa4.46□□□□□ -1.7
SHQ1-205ENST00000468371 CCDC140Q96MF4 163 aa4.46□□□□□ -1.7
SHQ1-205ENST00000468371 J3QQQ9 107 aa4.45□□□□□ -1.7
SHQ1-205ENST00000468371 KRTAP10-11P60412 298 aa4.45□□□□□ -1.7
SHQ1-205ENST00000468371 DAD1P61803 113 aa4.45□□□□□ -1.7
SHQ1-205ENST00000468371 FHL3Q13643 280 aa4.45□□□□□ -1.7
SHQ1-205ENST00000468371 ATXN8Q156A1 80 aa4.45□□□□□ -1.7
SHQ1-205ENST00000468371 TOMM7Q9P0U1 55 aa4.45□□□□□ -1.7
SHQ1-205ENST00000468371 KLK9Q9UKQ9 250 aa4.45□□□□□ -1.7
SHQ1-205ENST00000468371 TRGV2A0A075B6R0 118 aa4.45□□□□□ -1.7
SHQ1-205ENST00000468371 A0A096LNJ9 63 aa4.45□□□□□ -1.7
SHQ1-205ENST00000468371 CFHR3Q02985 330 aa4.45□□□□□ -1.7
SHQ1-205ENST00000468371 SBSPONQ8IVN8 264 aa4.45□□□□□ -1.7
SHQ1-205ENST00000468371 PLEKHB2Q96CS7 222 aa4.45□□□□□ -1.7
SHQ1-205ENST00000468371 RNF183Q96D59 192 aa4.45□□□□□ -1.7
SHQ1-205ENST00000468371 SCGB1A1P11684 91 aa4.45□□□□□ -1.7
SHQ1-205ENST00000468371 Q6ZQT7 251 aa4.45□□□□□ -1.7
SHQ1-205ENST00000468371 TRPT1Q86TN4 253 aaKnown RBP4.45□□□□□ -1.7
SHQ1-205ENST00000468371 ANKRD29Q8N6D5 301 aa4.45□□□□□ -1.7
SHQ1-205ENST00000468371 DEFB130BP0DP73 79 aa4.44□□□□□ -1.7
SHQ1-205ENST00000468371 DEFB130AP0DP74 79 aa4.44□□□□□ -1.7
SHQ1-205ENST00000468371 PHLDA1Q8WV24 401 aaPredicted RBP4.44□□□□□ -1.7
SHQ1-205ENST00000468371 A4D1N5 150 aa4.44□□□□□ -1.7
SHQ1-205ENST00000468371 C11orf86A6NJI1 115 aa4.44□□□□□ -1.7
SHQ1-205ENST00000468371 DEFB4AO15263 64 aa4.44□□□□□ -1.7
SHQ1-205ENST00000468371 BUB3O43684 328 aa4.44□□□□□ -1.7
SHQ1-205ENST00000468371 INSP01308 110 aa4.44□□□□□ -1.7
SHQ1-205ENST00000468371 SPART-AS1P0CW21 52 aa4.44□□□□□ -1.7
SHQ1-205ENST00000468371 OR13C6PQ8NH95 151 aa4.44□□□□□ -1.7
SHQ1-205ENST00000468371 BAALCQ8WXS3 180 aa4.44□□□□□ -1.7
SHQ1-205ENST00000468371 RNF185Q96GF1 192 aa4.44□□□□□ -1.7
SHQ1-205ENST00000468371 TM2D2Q9BX73 214 aa4.44□□□□□ -1.7
SHQ1-205ENST00000468371 WFDC10AQ9H1F0 79 aa4.44□□□□□ -1.7
SHQ1-205ENST00000468371 JPT2Q9H910 190 aa4.44□□□□□ -1.7
SHQ1-205ENST00000468371 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.44□□□□□ -1.7
SHQ1-205ENST00000468371 IGLC6P0CF74 106 aa4.44□□□□□ -1.7
SHQ1-205ENST00000468371 SPINK13Q1W4C9 94 aa4.44□□□□□ -1.7
SHQ1-205ENST00000468371 C19orf54Q5BKX5 351 aa4.44□□□□□ -1.7
SHQ1-205ENST00000468371 TEN1Q86WV5 123 aa4.44□□□□□ -1.7
SHQ1-205ENST00000468371 SMIM20Q8N5G0 67 aa4.44□□□□□ -1.7
SHQ1-205ENST00000468371 C15orf53Q8NAA6 179 aa4.44□□□□□ -1.7
SHQ1-205ENST00000468371 OPRPNQ99935 248 aaPredicted RBP4.44□□□□□ -1.7
SHQ1-205ENST00000468371 TIMM21Q9BVV7 248 aa4.44□□□□□ -1.7
SHQ1-205ENST00000468371 RETNQ9HD89 108 aa4.44□□□□□ -1.7
SHQ1-205ENST00000468371 NUPR2A6NF83 97 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 H3BMM0 161 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 EGFEM1PQ0D2K5 195 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 KIR2DL5BQ8NHK3 375 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 UBE2WQ96B02 151 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 F5H768 121 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 RS1O15537 224 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 BRI3O95415 125 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 TCL1BO95988 128 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 DNAL4O96015 105 aa4.43□□□□□ -1.7
SHQ1-205ENST00000468371 CFC1BP0CG36 223 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 227.9 ms