RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 SUMO4Q6EEV6 95 aa6.8□□□□□ -1.32
SSR3-205ENST00000467789 RASL11AQ6T310 242 aa6.8□□□□□ -1.32
SSR3-205ENST00000467789 PGLYRP4Q96LB8 373 aa6.8□□□□□ -1.32
SSR3-205ENST00000467789 RPP21Q9H633 154 aaKnown RBP6.8□□□□□ -1.32
SSR3-205ENST00000467789 NIT2Q9NQR4 276 aa6.8□□□□□ -1.32
SSR3-205ENST00000467789 A0A1B0GUV1 79 aa6.79□□□□□ -1.32
SSR3-205ENST00000467789 NDUFS6O75380 124 aaKnown RBP6.79□□□□□ -1.32
SSR3-205ENST00000467789 LYPD6BQ8NI32 183 aa6.79□□□□□ -1.32
SSR3-205ENST00000467789 FAM30AQ9NZY2 134 aa6.79□□□□□ -1.32
SSR3-205ENST00000467789 RBX1P62877 108 aa6.78□□□□□ -1.32
SSR3-205ENST00000467789 TEX261Q6UWH6 196 aa6.78□□□□□ -1.32
SSR3-205ENST00000467789 ALKAL2Q6UX46 152 aa6.78□□□□□ -1.32
SSR3-205ENST00000467789 FAM231DQ6ZW35 169 aa6.78□□□□□ -1.32
SSR3-205ENST00000467789 SMIM15Q7Z3B0 74 aa6.78□□□□□ -1.32
SSR3-205ENST00000467789 OCC1Q8TAD7 63 aa6.78□□□□□ -1.32
SSR3-205ENST00000467789 VPS13BQ7Z7G8 4022 aa6.78□□□□□ -1.32
SSR3-205ENST00000467789 DMBT1Q9UGM3 2413 aaPredicted RBP6.77□□□□□ -1.33
SSR3-205ENST00000467789 TRAV8-4A0A0B4J246 113 aa6.77□□□□□ -1.33
SSR3-205ENST00000467789 A8MWL6 223 aa6.77□□□□□ -1.33
SSR3-205ENST00000467789 K7EN84 100 aa6.77□□□□□ -1.33
SSR3-205ENST00000467789 NKX2-5P52952 324 aaPredicted RBP6.77□□□□□ -1.33
SSR3-205ENST00000467789 TWIST1Q15672 202 aa6.77□□□□□ -1.33
SSR3-205ENST00000467789 DGAT2L7PQ6IED9 249 aa6.77□□□□□ -1.33
SSR3-205ENST00000467789 LINC00269Q8N2A0 174 aa6.77□□□□□ -1.33
SSR3-205ENST00000467789 TMEM243Q9BU79 118 aa6.77□□□□□ -1.33
SSR3-205ENST00000467789 RNASE7Q9H1E1 156 aaKnown RBP6.77□□□□□ -1.33
SSR3-205ENST00000467789 FAT1Q14517 4588 aa6.76□□□□□ -1.33
SSR3-205ENST00000467789 USP17L23D6RBM5 183 aa6.76□□□□□ -1.33
SSR3-205ENST00000467789 HLA-DQA1P01909 254 aa6.76□□□□□ -1.33
SSR3-205ENST00000467789 HAMPP81172 84 aa6.76□□□□□ -1.33
SSR3-205ENST00000467789 REG3AQ06141 175 aa6.76□□□□□ -1.33
SSR3-205ENST00000467789 GAGE6Q13070 117 aa6.76□□□□□ -1.33
SSR3-205ENST00000467789 COTL1Q14019 142 aa6.76□□□□□ -1.33
SSR3-205ENST00000467789 C21orf62-AS1Q17RA5 79 aa6.76□□□□□ -1.33
SSR3-205ENST00000467789 CT83Q5H943 113 aa6.76□□□□□ -1.33
SSR3-205ENST00000467789 CLRN3Q8NCR9 226 aa6.76□□□□□ -1.33
SSR3-205ENST00000467789 FAM210AQ96ND0 272 aa6.76□□□□□ -1.33
SSR3-205ENST00000467789 CHAC1Q9BUX1 264 aa6.76□□□□□ -1.33
SSR3-205ENST00000467789 UBE2L6O14933 153 aa6.75□□□□□ -1.33
SSR3-205ENST00000467789 GATCO43716 136 aaKnown RBP6.75□□□□□ -1.33
SSR3-205ENST00000467789 FOXA3P55318 350 aaPredicted RBP6.75□□□□□ -1.33
SSR3-205ENST00000467789 hCG_2014768A0A024R1R8 64 aa6.74□□□□□ -1.33
SSR3-205ENST00000467789 FAM231BA6NCW3 169 aa6.74□□□□□ -1.33
SSR3-205ENST00000467789 NCR2O95944 276 aa6.74□□□□□ -1.33
SSR3-205ENST00000467789 AMTP48728 403 aa6.74□□□□□ -1.33
SSR3-205ENST00000467789 KRTAP26-1Q6PEX3 210 aa6.74□□□□□ -1.33
SSR3-205ENST00000467789 SCXQ7RTU7 201 aa6.74□□□□□ -1.33
SSR3-205ENST00000467789 GATD1Q8NB37 220 aa6.74□□□□□ -1.33
SSR3-205ENST00000467789 C20orf203Q8NBC4 194 aa6.74□□□□□ -1.33
SSR3-205ENST00000467789 GTSF1Q8WW33 167 aa6.74□□□□□ -1.33
SSR3-205ENST00000467789 BORCS7Q96B45 105 aa6.74□□□□□ -1.33
SSR3-205ENST00000467789 EIF5A2Q9GZV4 153 aaKnown RBP6.74□□□□□ -1.33
SSR3-205ENST00000467789 H7C423 109 aa6.73□□□□□ -1.33
SSR3-205ENST00000467789 LINC01620Q4KN68 170 aa6.73□□□□□ -1.33
SSR3-205ENST00000467789 CLPSL2Q6UWE3 100 aa6.73□□□□□ -1.33
SSR3-205ENST00000467789 C9orf163Q8N9P6 203 aa6.73□□□□□ -1.33
SSR3-205ENST00000467789 SMIM7Q9BQ49 75 aa6.73□□□□□ -1.33
SSR3-205ENST00000467789 GFRA4Q9GZZ7 299 aa6.73□□□□□ -1.33
SSR3-205ENST00000467789 DNAH8Q96JB1 4490 aa6.72□□□□□ -1.33
SSR3-205ENST00000467789 FLG2Q5D862 2391 aaPredicted RBP6.72□□□□□ -1.33
SSR3-205ENST00000467789 PRSS1P07477 247 aa6.72□□□□□ -1.33
SSR3-205ENST00000467789 DEFB104AQ8WTQ1 72 aa6.72□□□□□ -1.33
SSR3-205ENST00000467789 IGLV4-60A0A075B6I1 120 aa6.71□□□□□ -1.34
SSR3-205ENST00000467789 TRBV6-5A0A0K0K1A5 114 aa6.71□□□□□ -1.34
SSR3-205ENST00000467789 ZNF727A8MUV8 499 aa6.71□□□□□ -1.34
SSR3-205ENST00000467789 CEBPGP53567 150 aa6.71□□□□□ -1.34
SSR3-205ENST00000467789 CNBPP62633 177 aaKnown RBP6.71□□□□□ -1.34
SSR3-205ENST00000467789 LINC01551Q86U37 167 aa6.71□□□□□ -1.34
SSR3-205ENST00000467789 CIRBP-AS1Q8TBR5 109 aa6.71□□□□□ -1.34
SSR3-205ENST00000467789 TSKUQ8WUA8 353 aa6.71□□□□□ -1.34
SSR3-205ENST00000467789 OSTCQ9NRP0 149 aa6.71□□□□□ -1.34
SSR3-205ENST00000467789 IGLV10-54A0A075B6I4 117 aa6.7□□□□□ -1.34
SSR3-205ENST00000467789 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.7□□□□□ -1.34
SSR3-205ENST00000467789 TRAV26-2A0A0B4J265 109 aa6.7□□□□□ -1.34
SSR3-205ENST00000467789 A0A1B0GUT8 65 aa6.7□□□□□ -1.34
SSR3-205ENST00000467789 SDHAF1A6NFY7 115 aa6.7□□□□□ -1.34
SSR3-205ENST00000467789 APCSP02743 223 aa6.7□□□□□ -1.34
SSR3-205ENST00000467789 ZNF25P17030 456 aaPredicted RBP6.7□□□□□ -1.34
SSR3-205ENST00000467789 FAM74A3Q4VXF1 159 aa6.7□□□□□ -1.34
SSR3-205ENST00000467789 AMMECR1LQ6DCA0 310 aa6.7□□□□□ -1.34
SSR3-205ENST00000467789 TMEM191AQ9H0A3 160 aa6.7□□□□□ -1.34
SSR3-205ENST00000467789 MYCBP2O75592 4640 aa6.7□□□□□ -1.34
SSR3-205ENST00000467789 HIGD1CA8MV81 97 aa6.69□□□□□ -1.34
SSR3-205ENST00000467789 I3L3M4 83 aa6.69□□□□□ -1.34
SSR3-205ENST00000467789 SRP19P09132 144 aaKnown RBP6.69□□□□□ -1.34
SSR3-205ENST00000467789 CFAP161Q6P656 301 aa6.69□□□□□ -1.34
SSR3-205ENST00000467789 RPL39LQ96EH5 51 aaKnown RBP6.69□□□□□ -1.34
SSR3-205ENST00000467789 hDV102S1A0JD36 115 aa6.68□□□□□ -1.34
SSR3-205ENST00000467789 PPP1R17O96001 155 aa6.68□□□□□ -1.34
SSR3-205ENST00000467789 PMCHP20382 165 aa6.68□□□□□ -1.34
SSR3-205ENST00000467789 TMEM241Q24JQ0 296 aa6.68□□□□□ -1.34
SSR3-205ENST00000467789 SDIM1Q6ZPB5 146 aa6.68□□□□□ -1.34
SSR3-205ENST00000467789 MRAP2Q96G30 205 aa6.68□□□□□ -1.34
SSR3-205ENST00000467789 BTF3L4Q96K17 158 aa6.68□□□□□ -1.34
SSR3-205ENST00000467789 SMDT1Q9H4I9 107 aa6.68□□□□□ -1.34
SSR3-205ENST00000467789 ST20Q9HBF5 79 aa6.68□□□□□ -1.34
SSR3-205ENST00000467789 HERC1Q15751 4861 aa6.67□□□□□ -1.34
SSR3-205ENST00000467789 TRBV27A0A0K0K1C4 114 aa6.67□□□□□ -1.34
SSR3-205ENST00000467789 KRTAP29-1A8MX34 341 aaPredicted RBP6.67□□□□□ -1.34
SSR3-205ENST00000467789 FGF6P10767 208 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms