RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 FAM231BA6NCW3 169 aa12.72□□□□□ -0.37
GMDS-203ENST00000467288 HAMPP81172 84 aa12.72□□□□□ -0.37
GMDS-203ENST00000467288 COTL1Q14019 142 aa12.72□□□□□ -0.37
GMDS-203ENST00000467288 Q6ZSA8 131 aa12.72□□□□□ -0.37
GMDS-203ENST00000467288 MYCBP2O75592 4640 aa12.72□□□□□ -0.37
GMDS-203ENST00000467288 HIGD1CA8MV81 97 aa12.71□□□□□ -0.37
GMDS-203ENST00000467288 C9JQL5 133 aa12.71□□□□□ -0.37
GMDS-203ENST00000467288 FAM74A3Q4VXF1 159 aa12.71□□□□□ -0.37
GMDS-203ENST00000467288 Q5VSD8 79 aa12.71□□□□□ -0.37
GMDS-203ENST00000467288 KRTAP26-1Q6PEX3 210 aa12.71□□□□□ -0.37
GMDS-203ENST00000467288 CLPSL2Q6UWE3 100 aa12.71□□□□□ -0.37
GMDS-203ENST00000467288 DEFB104AQ8WTQ1 72 aa12.71□□□□□ -0.37
GMDS-203ENST00000467288 BORCS7Q96B45 105 aa12.71□□□□□ -0.37
GMDS-203ENST00000467288 RPL39LQ96EH5 51 aaKnown RBP12.71□□□□□ -0.37
GMDS-203ENST00000467288 SRRM2Q9UQ35 2752 aaKnown RBP12.71□□□□□ -0.38
GMDS-203ENST00000467288 A0A1B0GUT8 65 aa12.7□□□□□ -0.38
GMDS-203ENST00000467288 SMR3BP02814 79 aaPredicted RBP12.7□□□□□ -0.38
GMDS-203ENST00000467288 AMTP48728 403 aa12.7□□□□□ -0.38
GMDS-203ENST00000467288 REG3AQ06141 175 aa12.7□□□□□ -0.38
GMDS-203ENST00000467288 TMEM241Q24JQ0 296 aa12.7□□□□□ -0.38
GMDS-203ENST00000467288 C14orf177Q52M58 125 aa12.7□□□□□ -0.38
GMDS-203ENST00000467288 ISOC2Q96AB3 205 aa12.7□□□□□ -0.38
GMDS-203ENST00000467288 V9GYV3 84 aa12.7□□□□□ -0.38
GMDS-203ENST00000467288 IGLV4-60A0A075B6I1 120 aa12.69□□□□□ -0.38
GMDS-203ENST00000467288 RPL23P62829 140 aaKnown RBP12.69□□□□□ -0.38
GMDS-203ENST00000467288 NCR2O95944 276 aa12.68□□□□□ -0.38
GMDS-203ENST00000467288 HLA-DQA1P01909 254 aa12.68□□□□□ -0.38
GMDS-203ENST00000467288 SRSF3P84103 164 aaKnown RBP12.68□□□□□ -0.38
GMDS-203ENST00000467288 LINC01620Q4KN68 170 aa12.68□□□□□ -0.38
GMDS-203ENST00000467288 TMEM191AQ9H0A3 160 aa12.68□□□□□ -0.38
GMDS-203ENST00000467288 SMDT1Q9H4I9 107 aa12.68□□□□□ -0.38
GMDS-203ENST00000467288 TRBV6-5A0A0K0K1A5 114 aa12.67□□□□□ -0.38
GMDS-203ENST00000467288 USP17L23D6RBM5 183 aa12.67□□□□□ -0.38
GMDS-203ENST00000467288 UBE2L6O14933 153 aa12.67□□□□□ -0.38
GMDS-203ENST00000467288 PEA15Q15121 130 aa12.67□□□□□ -0.38
GMDS-203ENST00000467288 NAT8Q9UHE5 227 aa12.67□□□□□ -0.38
GMDS-203ENST00000467288 VPS13BQ7Z7G8 4022 aa12.66□□□□□ -0.38
GMDS-203ENST00000467288 TRAV8-4A0A0B4J246 113 aa12.66□□□□□ -0.38
GMDS-203ENST00000467288 SDHAF1A6NFY7 115 aa12.66□□□□□ -0.38
GMDS-203ENST00000467288 RNF185Q96GF1 192 aa12.66□□□□□ -0.38
GMDS-203ENST00000467288 GAS8-AS1O95177 125 aa12.65□□□□□ -0.38
GMDS-203ENST00000467288 NUP35Q8NFH5 326 aa12.65□□□□□ -0.38
GMDS-203ENST00000467288 IGLV10-54A0A075B6I4 117 aa12.64□□□□□ -0.39
GMDS-203ENST00000467288 RAB4AP20338 218 aa12.64□□□□□ -0.39
GMDS-203ENST00000467288 RIGQ13278 110 aa12.64□□□□□ -0.39
GMDS-203ENST00000467288 ADIRFQ15847 76 aa12.64□□□□□ -0.39
GMDS-203ENST00000467288 FAM229AH3BQW9 127 aa12.63□□□□□ -0.39
GMDS-203ENST00000467288 H7C423 109 aa12.63□□□□□ -0.39
GMDS-203ENST00000467288 I3L3M4 83 aa12.63□□□□□ -0.39
GMDS-203ENST00000467288 APCSP02743 223 aa12.63□□□□□ -0.39
GMDS-203ENST00000467288 PRSS1P07477 247 aa12.63□□□□□ -0.39
GMDS-203ENST00000467288 AMN1Q8IY45 258 aa12.62□□□□□ -0.39
GMDS-203ENST00000467288 MRAP2Q96G30 205 aa12.62□□□□□ -0.39
GMDS-203ENST00000467288 NAT8BQ9UHF3 227 aa12.62□□□□□ -0.39
GMDS-203ENST00000467288 FLG2Q5D862 2391 aaPredicted RBP12.62□□□□□ -0.39
GMDS-203ENST00000467288 PMCHP20382 165 aa12.61□□□□□ -0.39
GMDS-203ENST00000467288 DGAT2L7PQ6IED9 249 aa12.61□□□□□ -0.39
GMDS-203ENST00000467288 ST20Q9HBF5 79 aa12.61□□□□□ -0.39
GMDS-203ENST00000467288 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.6□□□□□ -0.39
GMDS-203ENST00000467288 SMIM27A0A1W2PRY6 76 aa12.6□□□□□ -0.39
GMDS-203ENST00000467288 IGKV2-29A2NJV5 120 aaPredicted RBP12.6□□□□□ -0.39
GMDS-203ENST00000467288 RPS10P46783 165 aaKnown RBP12.6□□□□□ -0.39
GMDS-203ENST00000467288 POLR2KP53803 58 aaKnown RBP12.6□□□□□ -0.39
GMDS-203ENST00000467288 SCXQ7RTU7 201 aa12.6□□□□□ -0.39
GMDS-203ENST00000467288 CLRN3Q8NCR9 226 aa12.6□□□□□ -0.39
GMDS-203ENST00000467288 DNAH8Q96JB1 4490 aa12.6□□□□□ -0.39
GMDS-203ENST00000467288 FGF6P10767 208 aa12.59□□□□□ -0.39
GMDS-203ENST00000467288 ESDP10768 282 aa12.59□□□□□ -0.39
GMDS-203ENST00000467288 AMMECR1LQ6DCA0 310 aa12.59□□□□□ -0.39
GMDS-203ENST00000467288 TRBV27A0A0K0K1C4 114 aa12.58□□□□□ -0.4
GMDS-203ENST00000467288 TSHBP01222 138 aa12.58□□□□□ -0.4
GMDS-203ENST00000467288 C9orf163Q8N9P6 203 aa12.58□□□□□ -0.4
GMDS-203ENST00000467288 CHAC1Q9BUX1 264 aa12.58□□□□□ -0.4
GMDS-203ENST00000467288 ZNF25P17030 456 aaPredicted RBP12.57□□□□□ -0.4
GMDS-203ENST00000467288 RNASEKQ6P5S7 137 aaKnown RBP12.57□□□□□ -0.4
GMDS-203ENST00000467288 TMEM242Q9NWH2 141 aa12.57□□□□□ -0.4
GMDS-203ENST00000467288 SMKR1H3BMG3 65 aa12.56□□□□□ -0.4
GMDS-203ENST00000467288 NRACQ8N912 160 aa12.56□□□□□ -0.4
GMDS-203ENST00000467288 PPP1R17O96001 155 aa12.55□□□□□ -0.4
GMDS-203ENST00000467288 FAM104BQ5XKR9 115 aa12.55□□□□□ -0.4
GMDS-203ENST00000467288 LINC00528Q8N1L1 170 aa12.55□□□□□ -0.4
GMDS-203ENST00000467288 IGKV3OR2-268A0A0C4DH90 116 aa12.54□□□□□ -0.4
GMDS-203ENST00000467288 A0A1B0GW15 77 aa12.54□□□□□ -0.4
GMDS-203ENST00000467288 GAGE12HA6NDE8 117 aa12.54□□□□□ -0.4
GMDS-203ENST00000467288 MRPL51Q4U2R6 128 aaKnown RBP12.54□□□□□ -0.4
GMDS-203ENST00000467288 CIRBP-AS1Q8TBR5 109 aa12.54□□□□□ -0.4
GMDS-203ENST00000467288 VCYO14598 125 aa12.53□□□□□ -0.4
GMDS-203ENST00000467288 CAMPP49913 170 aa12.53□□□□□ -0.4
GMDS-203ENST00000467288 CNBPP62633 177 aaKnown RBP12.53□□□□□ -0.4
GMDS-203ENST00000467288 OR5A1Q8NGJ0 315 aa12.53□□□□□ -0.4
GMDS-203ENST00000467288 BTF3L4Q96K17 158 aa12.53□□□□□ -0.4
GMDS-203ENST00000467288 hDV102S1A0JD36 115 aa12.52□□□□□ -0.41
GMDS-203ENST00000467288 SUMO2P61956 95 aaKnown RBP12.52□□□□□ -0.41
GMDS-203ENST00000467288 MRPL52Q86TS9 123 aaKnown RBP12.52□□□□□ -0.41
GMDS-203ENST00000467288 CHCHD10Q8WYQ3 142 aaPredicted RBP12.52□□□□□ -0.41
GMDS-203ENST00000467288 C7orf77A4D0Y5 90 aa12.51□□□□□ -0.41
GMDS-203ENST00000467288 LINC00862A6NCI5 91 aa12.51□□□□□ -0.41
GMDS-203ENST00000467288 SLPIP03973 132 aa12.51□□□□□ -0.41
GMDS-203ENST00000467288 PLA2G1BP04054 148 aaKnown RBP12.51□□□□□ -0.41
GMDS-203ENST00000467288 SDIM1Q6ZPB5 146 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms