RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 Q5VSD8 79 aa10.78□□□□□ -0.68
SHANK2-213ENST00000460048 CLPSL2Q6UWE3 100 aa10.78□□□□□ -0.68
SHANK2-213ENST00000460048 DEFB104AQ8WTQ1 72 aa10.78□□□□□ -0.68
SHANK2-213ENST00000460048 TSKUQ8WUA8 353 aa10.78□□□□□ -0.68
SHANK2-213ENST00000460048 RPL39LQ96EH5 51 aaKnown RBP10.78□□□□□ -0.68
SHANK2-213ENST00000460048 GFRA4Q9GZZ7 299 aa10.78□□□□□ -0.68
SHANK2-213ENST00000460048 IGLV4-60A0A075B6I1 120 aa10.77□□□□□ -0.69
SHANK2-213ENST00000460048 FAM231BA6NCW3 169 aa10.77□□□□□ -0.69
SHANK2-213ENST00000460048 C14orf177Q52M58 125 aa10.77□□□□□ -0.69
SHANK2-213ENST00000460048 TEX261Q6UWH6 196 aa10.77□□□□□ -0.69
SHANK2-213ENST00000460048 HIGD1CA8MV81 97 aa10.76□□□□□ -0.69
SHANK2-213ENST00000460048 C9JQL5 133 aa10.76□□□□□ -0.69
SHANK2-213ENST00000460048 AMTP48728 403 aa10.76□□□□□ -0.69
SHANK2-213ENST00000460048 REG3AQ06141 175 aa10.76□□□□□ -0.69
SHANK2-213ENST00000460048 LINC01620Q4KN68 170 aa10.76□□□□□ -0.69
SHANK2-213ENST00000460048 FAM74A3Q4VXF1 159 aa10.76□□□□□ -0.69
SHANK2-213ENST00000460048 V9GYV3 84 aa10.76□□□□□ -0.69
SHANK2-213ENST00000460048 A0A1B0GUT8 65 aa10.75□□□□□ -0.69
SHANK2-213ENST00000460048 USP17L23D6RBM5 183 aa10.75□□□□□ -0.69
SHANK2-213ENST00000460048 HLA-DQA1P01909 254 aa10.75□□□□□ -0.69
SHANK2-213ENST00000460048 TMEM241Q24JQ0 296 aa10.75□□□□□ -0.69
SHANK2-213ENST00000460048 ISOC2Q96AB3 205 aa10.75□□□□□ -0.69
SHANK2-213ENST00000460048 BORCS7Q96B45 105 aa10.75□□□□□ -0.69
SHANK2-213ENST00000460048 VPS13BQ7Z7G8 4022 aa10.75□□□□□ -0.69
SHANK2-213ENST00000460048 RPL23P62829 140 aaKnown RBP10.74□□□□□ -0.69
SHANK2-213ENST00000460048 SRSF3P84103 164 aaKnown RBP10.74□□□□□ -0.69
SHANK2-213ENST00000460048 TMEM191AQ9H0A3 160 aa10.74□□□□□ -0.69
SHANK2-213ENST00000460048 TRAV8-4A0A0B4J246 113 aa10.73□□□□□ -0.69
SHANK2-213ENST00000460048 TRBV6-5A0A0K0K1A5 114 aa10.73□□□□□ -0.69
SHANK2-213ENST00000460048 SDHAF1A6NFY7 115 aa10.73□□□□□ -0.69
SHANK2-213ENST00000460048 UBE2L6O14933 153 aa10.73□□□□□ -0.69
SHANK2-213ENST00000460048 NCR2O95944 276 aa10.73□□□□□ -0.69
SHANK2-213ENST00000460048 RNF185Q96GF1 192 aa10.73□□□□□ -0.69
SHANK2-213ENST00000460048 FAM229AH3BQW9 127 aa10.72□□□□□ -0.69
SHANK2-213ENST00000460048 GAS8-AS1O95177 125 aa10.72□□□□□ -0.69
SHANK2-213ENST00000460048 PRSS1P07477 247 aa10.72□□□□□ -0.69
SHANK2-213ENST00000460048 PEA15Q15121 130 aa10.72□□□□□ -0.69
SHANK2-213ENST00000460048 SMDT1Q9H4I9 107 aa10.72□□□□□ -0.69
SHANK2-213ENST00000460048 IGLV10-54A0A075B6I4 117 aa10.71□□□□□ -0.69
SHANK2-213ENST00000460048 INAFM2P0DMQ5 153 aa10.71□□□□□ -0.69
SHANK2-213ENST00000460048 RAB4AP20338 218 aa10.71□□□□□ -0.69
SHANK2-213ENST00000460048 NUP35Q8NFH5 326 aa10.71□□□□□ -0.69
SHANK2-213ENST00000460048 NAT8Q9UHE5 227 aa10.71□□□□□ -0.69
SHANK2-213ENST00000460048 H7C423 109 aa10.7□□□□□ -0.7
SHANK2-213ENST00000460048 ADIRFQ15847 76 aa10.7□□□□□ -0.7
SHANK2-213ENST00000460048 I3L3M4 83 aa10.69□□□□□ -0.7
SHANK2-213ENST00000460048 APCSP02743 223 aa10.69□□□□□ -0.7
SHANK2-213ENST00000460048 RIGQ13278 110 aa10.69□□□□□ -0.7
SHANK2-213ENST00000460048 DGAT2L7PQ6IED9 249 aa10.69□□□□□ -0.7
SHANK2-213ENST00000460048 AMN1Q8IY45 258 aa10.69□□□□□ -0.7
SHANK2-213ENST00000460048 MRAP2Q96G30 205 aa10.69□□□□□ -0.7
SHANK2-213ENST00000460048 HERC1Q15751 4861 aa10.68□□□□□ -0.7
SHANK2-213ENST00000460048 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.68□□□□□ -0.7
SHANK2-213ENST00000460048 IGKV2-29A2NJV5 120 aaPredicted RBP10.68□□□□□ -0.7
SHANK2-213ENST00000460048 PMCHP20382 165 aa10.68□□□□□ -0.7
SHANK2-213ENST00000460048 RPS10P46783 165 aaKnown RBP10.68□□□□□ -0.7
SHANK2-213ENST00000460048 POLR2KP53803 58 aaKnown RBP10.68□□□□□ -0.7
SHANK2-213ENST00000460048 SCXQ7RTU7 201 aa10.68□□□□□ -0.7
SHANK2-213ENST00000460048 ST20Q9HBF5 79 aa10.68□□□□□ -0.7
SHANK2-213ENST00000460048 NAT8BQ9UHF3 227 aa10.68□□□□□ -0.7
SHANK2-213ENST00000460048 SMIM27A0A1W2PRY6 76 aa10.67□□□□□ -0.7
SHANK2-213ENST00000460048 TSHBP01222 138 aa10.67□□□□□ -0.7
SHANK2-213ENST00000460048 ESDP10768 282 aa10.67□□□□□ -0.7
SHANK2-213ENST00000460048 C9orf163Q8N9P6 203 aa10.67□□□□□ -0.7
SHANK2-213ENST00000460048 CLRN3Q8NCR9 226 aa10.67□□□□□ -0.7
SHANK2-213ENST00000460048 CHAC1Q9BUX1 264 aa10.67□□□□□ -0.7
SHANK2-213ENST00000460048 FGF6P10767 208 aa10.66□□□□□ -0.7
SHANK2-213ENST00000460048 AMMECR1LQ6DCA0 310 aa10.66□□□□□ -0.7
SHANK2-213ENST00000460048 SRRM2Q9UQ35 2752 aaKnown RBP10.65□□□□□ -0.7
SHANK2-213ENST00000460048 TRBV27A0A0K0K1C4 114 aa10.65□□□□□ -0.7
SHANK2-213ENST00000460048 RNASEKQ6P5S7 137 aaKnown RBP10.65□□□□□ -0.7
SHANK2-213ENST00000460048 CIRBP-AS1Q8TBR5 109 aa10.65□□□□□ -0.7
SHANK2-213ENST00000460048 TMEM242Q9NWH2 141 aa10.65□□□□□ -0.7
SHANK2-213ENST00000460048 SMKR1H3BMG3 65 aa10.64□□□□□ -0.71
SHANK2-213ENST00000460048 ZNF25P17030 456 aaPredicted RBP10.64□□□□□ -0.71
SHANK2-213ENST00000460048 LINC00528Q8N1L1 170 aa10.64□□□□□ -0.71
SHANK2-213ENST00000460048 NRACQ8N912 160 aa10.64□□□□□ -0.71
SHANK2-213ENST00000460048 CNBPP62633 177 aaKnown RBP10.63□□□□□ -0.71
SHANK2-213ENST00000460048 FAM104BQ5XKR9 115 aa10.63□□□□□ -0.71
SHANK2-213ENST00000460048 IGKV3OR2-268A0A0C4DH90 116 aa10.62□□□□□ -0.71
SHANK2-213ENST00000460048 hDV102S1A0JD36 115 aa10.62□□□□□ -0.71
SHANK2-213ENST00000460048 GAGE12HA6NDE8 117 aa10.62□□□□□ -0.71
SHANK2-213ENST00000460048 PLA2G1BP04054 148 aaKnown RBP10.62□□□□□ -0.71
SHANK2-213ENST00000460048 OR5A1Q8NGJ0 315 aa10.62□□□□□ -0.71
SHANK2-213ENST00000460048 A0A1B0GW15 77 aa10.61□□□□□ -0.71
SHANK2-213ENST00000460048 VCYO14598 125 aa10.61□□□□□ -0.71
SHANK2-213ENST00000460048 PPP1R17O96001 155 aa10.61□□□□□ -0.71
SHANK2-213ENST00000460048 SLPIP03973 132 aa10.61□□□□□ -0.71
SHANK2-213ENST00000460048 MRPL51Q4U2R6 128 aaKnown RBP10.61□□□□□ -0.71
SHANK2-213ENST00000460048 SDIM1Q6ZPB5 146 aa10.61□□□□□ -0.71
SHANK2-213ENST00000460048 MRPL52Q86TS9 123 aaKnown RBP10.61□□□□□ -0.71
SHANK2-213ENST00000460048 C15orf56Q8N910 161 aa10.61□□□□□ -0.71
SHANK2-213ENST00000460048 CHCHD10Q8WYQ3 142 aaPredicted RBP10.61□□□□□ -0.71
SHANK2-213ENST00000460048 FLG2Q5D862 2391 aaPredicted RBP10.61□□□□□ -0.71
SHANK2-213ENST00000460048 CAMPP49913 170 aa10.6□□□□□ -0.71
SHANK2-213ENST00000460048 SUMO2P61956 95 aaKnown RBP10.6□□□□□ -0.71
SHANK2-213ENST00000460048 TMEM101Q96IK0 257 aa10.6□□□□□ -0.71
SHANK2-213ENST00000460048 BTF3L4Q96K17 158 aa10.6□□□□□ -0.71
SHANK2-213ENST00000460048 A0A1B0GXF2 115 aa10.59□□□□□ -0.71
SHANK2-213ENST00000460048 C7orf77A4D0Y5 90 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 206.5 ms