RNA–Protein interactions for RNA: ENST00000457749.6

ZNF28-204, Transcript of zinc finger protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF28, Length 4,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-204ENST00000457749 PPBPP02775 128 aa3.38□□□□□ -1.87
ZNF28-204ENST00000457749 COTL1Q14019 142 aa3.38□□□□□ -1.87
ZNF28-204ENST00000457749 RASL11AQ6T310 242 aa3.38□□□□□ -1.87
ZNF28-204ENST00000457749 SYS1-DBNDD2H3BUS1 97 aa3.38□□□□□ -1.87
ZNF28-204ENST00000457749 RPL24P83731 157 aaKnown RBP3.38□□□□□ -1.87
ZNF28-204ENST00000457749 TRAV9-2A0A087WT02 112 aa3.37□□□□□ -1.87
ZNF28-204ENST00000457749 GIG44P09565 113 aaPredicted RBP3.37□□□□□ -1.87
ZNF28-204ENST00000457749 SUMO4Q6EEV6 95 aa3.37□□□□□ -1.87
ZNF28-204ENST00000457749 SCGB1D4Q6XE38 83 aa3.37□□□□□ -1.87
ZNF28-204ENST00000457749 EDA2RQ9HAV5 297 aa3.37□□□□□ -1.87
ZNF28-204ENST00000457749 A0A087WX48 190 aa3.37□□□□□ -1.87
ZNF28-204ENST00000457749 PPP1R17O96001 155 aa3.37□□□□□ -1.87
ZNF28-204ENST00000457749 CTRLP40313 264 aa3.37□□□□□ -1.87
ZNF28-204ENST00000457749 SUMO2P61956 95 aaKnown RBP3.37□□□□□ -1.87
ZNF28-204ENST00000457749 KLK5Q9Y337 293 aaPredicted RBP3.37□□□□□ -1.87
ZNF28-204ENST00000457749 VCYO14598 125 aa3.37□□□□□ -1.87
ZNF28-204ENST00000457749 CFAP126Q5VTH2 177 aa3.37□□□□□ -1.87
ZNF28-204ENST00000457749 SPATA12Q7Z6I5 190 aa3.37□□□□□ -1.87
ZNF28-204ENST00000457749 IL17DQ8TAD2 202 aa3.37□□□□□ -1.87
ZNF28-204ENST00000457749 RNASE8Q8TDE3 154 aaKnown RBP3.37□□□□□ -1.87
ZNF28-204ENST00000457749 DKK2Q9UBU2 259 aa3.37□□□□□ -1.87
ZNF28-204ENST00000457749 LOC100131303A0A0U1RQF7 123 aa3.37□□□□□ -1.87
ZNF28-204ENST00000457749 H3BUT2 72 aa3.37□□□□□ -1.87
ZNF28-204ENST00000457749 IGLC3P0DOY3 106 aa3.37□□□□□ -1.87
ZNF28-204ENST00000457749 Q0VG73 95 aa3.37□□□□□ -1.87
ZNF28-204ENST00000457749 DNLZQ5SXM8 178 aa3.37□□□□□ -1.87
ZNF28-204ENST00000457749 SLC25A29Q8N8R3 303 aa3.37□□□□□ -1.87
ZNF28-204ENST00000457749 GATD1Q8NB37 220 aa3.37□□□□□ -1.87
ZNF28-204ENST00000457749 FAM19A4Q96LR4 140 aa3.37□□□□□ -1.87
ZNF28-204ENST00000457749 A0A0U1RRA0 63 aa3.36□□□□□ -1.87
ZNF28-204ENST00000457749 PRO0255Q9UI72 69 aa3.36□□□□□ -1.87
ZNF28-204ENST00000457749 CRYGDP07320 174 aa3.36□□□□□ -1.87
ZNF28-204ENST00000457749 IFI27L1Q96BM0 104 aa3.36□□□□□ -1.87
ZNF28-204ENST00000457749 SCGB3A1Q96QR1 104 aa3.36□□□□□ -1.87
ZNF28-204ENST00000457749 X6R8D5 127 aa3.36□□□□□ -1.87
ZNF28-204ENST00000457749 C3orf84H3BNL1 204 aa3.36□□□□□ -1.87
ZNF28-204ENST00000457749 RHOHQ15669 191 aa3.36□□□□□ -1.87
ZNF28-204ENST00000457749 ZC2HC1BQ5TFG8 222 aa3.36□□□□□ -1.87
ZNF28-204ENST00000457749 RASL10AQ92737 203 aa3.36□□□□□ -1.87
ZNF28-204ENST00000457749 C9orf85Q96MD7 179 aa3.36□□□□□ -1.87
ZNF28-204ENST00000457749 SRRM2Q9UQ35 2752 aaKnown RBP3.36□□□□□ -1.87
ZNF28-204ENST00000457749 KMT2CQ8NEZ4 4911 aaKnown RBP3.36□□□□□ -1.87
ZNF28-204ENST00000457749 LYRM9A8MSI8 78 aa3.36□□□□□ -1.87
ZNF28-204ENST00000457749 NPC2P61916 151 aa3.36□□□□□ -1.87
ZNF28-204ENST00000457749 GAGE6Q13070 117 aa3.36□□□□□ -1.87
ZNF28-204ENST00000457749 SRSF9Q13242 221 aaKnown RBP eCLIP3.36□□□□□ -1.87
ZNF28-204ENST00000457749 LGALS9BQ3B8N2 356 aa3.36□□□□□ -1.87
ZNF28-204ENST00000457749 RNASE13Q5GAN3 156 aaKnown RBP3.36□□□□□ -1.87
ZNF28-204ENST00000457749 COA6Q5JTJ3 125 aaKnown RBP3.36□□□□□ -1.87
ZNF28-204ENST00000457749 PCP2Q8IVA1 136 aa3.36□□□□□ -1.87
ZNF28-204ENST00000457749 MRAP2Q96G30 205 aa3.36□□□□□ -1.87
ZNF28-204ENST00000457749 NXT2Q9NPJ8 142 aaKnown RBP3.36□□□□□ -1.87
ZNF28-204ENST00000457749 Q9UF83 564 aa3.36□□□□□ -1.87
ZNF28-204ENST00000457749 TRAV4A0A0B4J268 109 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 K7EP13 123 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 DAZ2Q13117 558 aaKnown RBP3.35□□□□□ -1.87
ZNF28-204ENST00000457749 COX8CQ7Z4L0 72 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 CSNK1G2-AS1Q8NCQ2 148 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 ATP6V0E2Q8NHE4 81 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 NHP2Q9NX24 153 aaKnown RBP3.35□□□□□ -1.87
ZNF28-204ENST00000457749 TRBV7-3A0A075B6L6 115 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 K7EQD1 137 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 DLEU1O43261 78 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 HBDP02042 147 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 LAGE3Q14657 143 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 MRPL23Q16540 153 aaKnown RBP3.35□□□□□ -1.87
ZNF28-204ENST00000457749 TMEM170BQ5T4T1 132 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 TEX43Q6ZNM6 134 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 Q6ZSN1 163 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 C11orf72Q8NBR9 251 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 CLUHP3Q96NS8 147 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 C2orf88Q9BSF0 95 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.35□□□□□ -1.87
ZNF28-204ENST00000457749 LOC107984156A0A0G2JMH3 177 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 A0A1B0GXF2 115 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 IGKV2-29A2NJV5 120 aaPredicted RBP3.35□□□□□ -1.87
ZNF28-204ENST00000457749 GAGE10A6NGK3 116 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 I3L3M4 83 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 K7ERJ3 54 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 APOMO95445 188 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 MED14OSP0DP75 135 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 CEMP1Q6PRD7 247 aaPredicted RBP3.35□□□□□ -1.87
ZNF28-204ENST00000457749 CLPSL2Q6UWE3 100 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 ARL17AQ8IVW1 177 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 HIST1H4GQ99525 98 aa3.35□□□□□ -1.87
ZNF28-204ENST00000457749 TRAV13-1A0A0B4J241 112 aa3.34□□□□□ -1.87
ZNF28-204ENST00000457749 ANKRD39Q53RE8 183 aa3.34□□□□□ -1.87
ZNF28-204ENST00000457749 TMEM101Q96IK0 257 aa3.34□□□□□ -1.87
ZNF28-204ENST00000457749 VCX2Q9H322 139 aa3.34□□□□□ -1.87
ZNF28-204ENST00000457749 CYSLTR1Q9Y271 337 aa3.34□□□□□ -1.87
ZNF28-204ENST00000457749 DNAH9Q9NYC9 4486 aa3.34□□□□□ -1.87
ZNF28-204ENST00000457749 Q1RN00 199 aa3.34□□□□□ -1.87
ZNF28-204ENST00000457749 TMEM97Q5BJF2 176 aa3.34□□□□□ -1.87
ZNF28-204ENST00000457749 Q8NAQ8 132 aa3.34□□□□□ -1.87
ZNF28-204ENST00000457749 SMIM2Q9BVW6 85 aa3.34□□□□□ -1.87
ZNF28-204ENST00000457749 IGHV4-4A0A075B6R2 117 aa3.34□□□□□ -1.87
ZNF28-204ENST00000457749 NUPR2A6NF83 97 aa3.34□□□□□ -1.87
ZNF28-204ENST00000457749 M0QY20 66 aa3.34□□□□□ -1.87
ZNF28-204ENST00000457749 C12orf74Q32Q52 190 aa3.34□□□□□ -1.87
ZNF28-204ENST00000457749 POM121L12Q8N7R1 296 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 218.1 ms