RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 NIT2Q9NQR4 276 aa7.71□□□□□ -1.18
PDGFB-204ENST00000455790 BIN3Q9NQY0 253 aa7.71□□□□□ -1.18
PDGFB-204ENST00000455790 PANO1I0J062 215 aa7.7□□□□□ -1.18
PDGFB-204ENST00000455790 TAGLN2P37802 199 aaKnown RBP7.7□□□□□ -1.18
PDGFB-204ENST00000455790 TWIST1Q15672 202 aa7.7□□□□□ -1.18
PDGFB-204ENST00000455790 WDR73Q6P4I2 378 aa7.7□□□□□ -1.18
PDGFB-204ENST00000455790 GATD1Q8NB37 220 aa7.7□□□□□ -1.18
PDGFB-204ENST00000455790 PGLYRP4Q96LB8 373 aa7.7□□□□□ -1.18
PDGFB-204ENST00000455790 AMTP48728 403 aa7.69□□□□□ -1.18
PDGFB-204ENST00000455790 RPL39LQ96EH5 51 aaKnown RBP7.69□□□□□ -1.18
PDGFB-204ENST00000455790 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.69□□□□□ -1.18
PDGFB-204ENST00000455790 PKHD1L1Q86WI1 4243 aa7.68□□□□□ -1.18
PDGFB-204ENST00000455790 A0A1B0GUV1 79 aa7.68□□□□□ -1.18
PDGFB-204ENST00000455790 J3QL48 77 aa7.68□□□□□ -1.18
PDGFB-204ENST00000455790 COTL1Q14019 142 aa7.68□□□□□ -1.18
PDGFB-204ENST00000455790 TMEM250H0YL14 139 aa7.67□□□□□ -1.18
PDGFB-204ENST00000455790 CEBPGP53567 150 aa7.67□□□□□ -1.18
PDGFB-204ENST00000455790 DGAT2L7PQ6IED9 249 aa7.67□□□□□ -1.18
PDGFB-204ENST00000455790 C9orf163Q8N9P6 203 aa7.67□□□□□ -1.18
PDGFB-204ENST00000455790 LYPD6BQ8NI32 183 aa7.67□□□□□ -1.18
PDGFB-204ENST00000455790 FAT3Q8TDW7 4589 aa7.67□□□□□ -1.18
PDGFB-204ENST00000455790 hDV102S1A0JD36 115 aa7.66□□□□□ -1.18
PDGFB-204ENST00000455790 KRTAP29-1A8MX34 341 aaPredicted RBP7.66□□□□□ -1.18
PDGFB-204ENST00000455790 UBE2L6O14933 153 aa7.66□□□□□ -1.18
PDGFB-204ENST00000455790 GATCO43716 136 aaKnown RBP7.66□□□□□ -1.18
PDGFB-204ENST00000455790 GAS8-AS1O95177 125 aa7.66□□□□□ -1.18
PDGFB-204ENST00000455790 BLOC1S1P78537 153 aa7.66□□□□□ -1.18
PDGFB-204ENST00000455790 SDIM1Q6ZPB5 146 aa7.66□□□□□ -1.18
PDGFB-204ENST00000455790 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.65□□□□□ -1.18
PDGFB-204ENST00000455790 TRAV8-4A0A0B4J246 113 aa7.65□□□□□ -1.18
PDGFB-204ENST00000455790 IGKV3OR2-268A0A0C4DH90 116 aa7.65□□□□□ -1.18
PDGFB-204ENST00000455790 IGKV2-29A2NJV5 120 aaPredicted RBP7.65□□□□□ -1.18
PDGFB-204ENST00000455790 SLPIP03973 132 aa7.65□□□□□ -1.18
PDGFB-204ENST00000455790 HNRNPA3P51991 378 aaKnown RBP7.65□□□□□ -1.18
PDGFB-204ENST00000455790 CNBPP62633 177 aaKnown RBP7.65□□□□□ -1.18
PDGFB-204ENST00000455790 FAM231DQ6ZW35 169 aa7.65□□□□□ -1.18
PDGFB-204ENST00000455790 C15orf56Q8N910 161 aa7.64□□□□□ -1.19
PDGFB-204ENST00000455790 CLRN3Q8NCR9 226 aa7.64□□□□□ -1.19
PDGFB-204ENST00000455790 GAGE12HA6NDE8 117 aa7.63□□□□□ -1.19
PDGFB-204ENST00000455790 SDHAF1A6NFY7 115 aa7.63□□□□□ -1.19
PDGFB-204ENST00000455790 A8MWL6 223 aa7.63□□□□□ -1.19
PDGFB-204ENST00000455790 CHTF8P0CG12 524 aa7.63□□□□□ -1.19
PDGFB-204ENST00000455790 RPL37AP61513 92 aaKnown RBP7.63□□□□□ -1.19
PDGFB-204ENST00000455790 CT83Q5H943 113 aa7.63□□□□□ -1.19
PDGFB-204ENST00000455790 SMIM15Q7Z3B0 74 aa7.63□□□□□ -1.19
PDGFB-204ENST00000455790 LINC01551Q86U37 167 aa7.63□□□□□ -1.19
PDGFB-204ENST00000455790 SMIM7Q9BQ49 75 aa7.63□□□□□ -1.19
PDGFB-204ENST00000455790 A0A1B0GVG6 124 aa7.62□□□□□ -1.19
PDGFB-204ENST00000455790 FAM231BA6NCW3 169 aa7.62□□□□□ -1.19
PDGFB-204ENST00000455790 HIGD1CA8MV81 97 aa7.62□□□□□ -1.19
PDGFB-204ENST00000455790 APCSP02743 223 aa7.62□□□□□ -1.19
PDGFB-204ENST00000455790 FGF6P10767 208 aa7.62□□□□□ -1.19
PDGFB-204ENST00000455790 CIRBPQ14011 172 aaKnown RBP7.62□□□□□ -1.19
PDGFB-204ENST00000455790 RNASEKQ6P5S7 137 aaKnown RBP7.62□□□□□ -1.19
PDGFB-204ENST00000455790 EIF5A2Q9GZV4 153 aaKnown RBP7.62□□□□□ -1.19
PDGFB-204ENST00000455790 NCR2O95944 276 aa7.61□□□□□ -1.19
PDGFB-204ENST00000455790 SRP19P09132 144 aaKnown RBP7.61□□□□□ -1.19
PDGFB-204ENST00000455790 RPS10P46783 165 aaKnown RBP7.61□□□□□ -1.19
PDGFB-204ENST00000455790 HIGD2BQ4VC39 106 aa7.61□□□□□ -1.19
PDGFB-204ENST00000455790 AMMECR1LQ6DCA0 310 aa7.61□□□□□ -1.19
PDGFB-204ENST00000455790 TSKUQ8WUA8 353 aa7.61□□□□□ -1.19
PDGFB-204ENST00000455790 CHCHD10Q8WYQ3 142 aaPredicted RBP7.61□□□□□ -1.19
PDGFB-204ENST00000455790 RNF185Q96GF1 192 aa7.61□□□□□ -1.19
PDGFB-204ENST00000455790 FAM210AQ96ND0 272 aa7.61□□□□□ -1.19
PDGFB-204ENST00000455790 TMEM242Q9NWH2 141 aa7.61□□□□□ -1.19
PDGFB-204ENST00000455790 IGHV3-64A0A075B6Q5 118 aa7.6□□□□□ -1.19
PDGFB-204ENST00000455790 TRBV6-5A0A0K0K1A5 114 aa7.6□□□□□ -1.19
PDGFB-204ENST00000455790 A0A1B0GUT8 65 aa7.6□□□□□ -1.19
PDGFB-204ENST00000455790 ZNF727A8MUV8 499 aa7.6□□□□□ -1.19
PDGFB-204ENST00000455790 TSHBP01222 138 aa7.6□□□□□ -1.19
PDGFB-204ENST00000455790 TEX261Q6UWH6 196 aa7.6□□□□□ -1.19
PDGFB-204ENST00000455790 AP5S1Q9NUS5 200 aa7.6□□□□□ -1.19
PDGFB-204ENST00000455790 HMCN2Q8NDA2 5059 aa7.59□□□□□ -1.19
PDGFB-204ENST00000455790 I3L3M4 83 aa7.59□□□□□ -1.19
PDGFB-204ENST00000455790 PMCHP20382 165 aa7.59□□□□□ -1.19
PDGFB-204ENST00000455790 AMN1Q8IY45 258 aa7.59□□□□□ -1.19
PDGFB-204ENST00000455790 SPACA4Q8TDM5 124 aa7.59□□□□□ -1.19
PDGFB-204ENST00000455790 OSTCQ9NRP0 149 aa7.59□□□□□ -1.19
PDGFB-204ENST00000455790 V9GYV3 84 aa7.59□□□□□ -1.19
PDGFB-204ENST00000455790 A0A087WYN8 130 aa7.58□□□□□ -1.2
PDGFB-204ENST00000455790 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.58□□□□□ -1.2
PDGFB-204ENST00000455790 C9JQL5 133 aa7.58□□□□□ -1.2
PDGFB-204ENST00000455790 SMKR1H3BMG3 65 aa7.58□□□□□ -1.2
PDGFB-204ENST00000455790 H7C423 109 aa7.58□□□□□ -1.2
PDGFB-204ENST00000455790 ESDP10768 282 aa7.58□□□□□ -1.2
PDGFB-204ENST00000455790 RAB4AP20338 218 aa7.58□□□□□ -1.2
PDGFB-204ENST00000455790 FOXI1Q12951 378 aa7.58□□□□□ -1.2
PDGFB-204ENST00000455790 BORCS7Q96B45 105 aa7.58□□□□□ -1.2
PDGFB-204ENST00000455790 TMEM191AQ9H0A3 160 aa7.58□□□□□ -1.2
PDGFB-204ENST00000455790 ST20Q9HBF5 79 aa7.58□□□□□ -1.2
PDGFB-204ENST00000455790 NDUFS6O75380 124 aaKnown RBP7.57□□□□□ -1.2
PDGFB-204ENST00000455790 OXTP01178 125 aa7.57□□□□□ -1.2
PDGFB-204ENST00000455790 ZNF25P17030 456 aaPredicted RBP7.57□□□□□ -1.2
PDGFB-204ENST00000455790 XCL1P47992 114 aa7.57□□□□□ -1.2
PDGFB-204ENST00000455790 OR5A1Q8NGJ0 315 aa7.57□□□□□ -1.2
PDGFB-204ENST00000455790 ISOC2Q96AB3 205 aa7.57□□□□□ -1.2
PDGFB-204ENST00000455790 GVQW2A0A096LPI5 108 aaPredicted RBP7.56□□□□□ -1.2
PDGFB-204ENST00000455790 CCL25O15444 150 aa7.56□□□□□ -1.2
PDGFB-204ENST00000455790 POLR2KP53803 58 aaKnown RBP7.56□□□□□ -1.2
PDGFB-204ENST00000455790 COX6A2Q02221 97 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms