RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 RPL39LQ96EH5 51 aaKnown RBP9.85□□□□□ -0.83
SHMT2-203ENST00000449049 NEXN-AS1Q8NBZ9 246 aa9.84□□□□□ -0.83
SHMT2-203ENST00000449049 VSIG2Q96IQ7 327 aa9.84□□□□□ -0.83
SHMT2-203ENST00000449049 PRELID3AQ96N28 172 aa9.84□□□□□ -0.83
SHMT2-203ENST00000449049 PRADC1Q9BSG0 188 aa9.84□□□□□ -0.83
SHMT2-203ENST00000449049 Q9UF83 564 aa9.84□□□□□ -0.83
SHMT2-203ENST00000449049 TRAV26-1A0A087WT03 109 aa9.83□□□□□ -0.84
SHMT2-203ENST00000449049 TRBV6-5A0A0K0K1A5 114 aa9.83□□□□□ -0.84
SHMT2-203ENST00000449049 PAX4O43316 350 aa9.83□□□□□ -0.84
SHMT2-203ENST00000449049 PPP1R17O96001 155 aa9.83□□□□□ -0.84
SHMT2-203ENST00000449049 PHLDA1Q8WV24 401 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-203ENST00000449049 DNAJC30Q96LL9 226 aa9.83□□□□□ -0.84
SHMT2-203ENST00000449049 H3BNG1 76 aa9.83□□□□□ -0.84
SHMT2-203ENST00000449049 TNFRSF6BO95407 300 aa9.83□□□□□ -0.84
SHMT2-203ENST00000449049 NPYP01303 97 aa9.83□□□□□ -0.84
SHMT2-203ENST00000449049 HNRNPA3P51991 378 aaKnown RBP9.83□□□□□ -0.84
SHMT2-203ENST00000449049 Q6ZN92 141 aa9.83□□□□□ -0.84
SHMT2-203ENST00000449049 A0A0J9YY99 117 aa9.82□□□□□ -0.84
SHMT2-203ENST00000449049 LOC100131303A0A0U1RQF7 123 aa9.82□□□□□ -0.84
SHMT2-203ENST00000449049 SRIP30626 198 aa9.82□□□□□ -0.84
SHMT2-203ENST00000449049 AMTP48728 403 aa9.82□□□□□ -0.84
SHMT2-203ENST00000449049 MRPS16Q9Y3D3 137 aaKnown RBP9.82□□□□□ -0.84
SHMT2-203ENST00000449049 LINC00694P0DN24 101 aa9.82□□□□□ -0.84
SHMT2-203ENST00000449049 OCIAD2Q56VL3 154 aa9.82□□□□□ -0.84
SHMT2-203ENST00000449049 TRBV7-3A0A075B6L6 115 aa9.81□□□□□ -0.84
SHMT2-203ENST00000449049 C3orf79P0CE67 100 aa9.81□□□□□ -0.84
SHMT2-203ENST00000449049 GYPEP15421 78 aa9.81□□□□□ -0.84
SHMT2-203ENST00000449049 RPL36AP83881 106 aaKnown RBP9.81□□□□□ -0.84
SHMT2-203ENST00000449049 NIT1Q86X76 327 aa9.81□□□□□ -0.84
SHMT2-203ENST00000449049 RPL36ALQ969Q0 106 aaKnown RBP9.81□□□□□ -0.84
SHMT2-203ENST00000449049 C20orf78Q9BR46 151 aa9.81□□□□□ -0.84
SHMT2-203ENST00000449049 COX11Q9Y6N1 276 aa9.81□□□□□ -0.84
SHMT2-203ENST00000449049 ZNRF2Q8NHG8 242 aa9.8□□□□□ -0.84
SHMT2-203ENST00000449049 ST20Q9HBF5 79 aa9.8□□□□□ -0.84
SHMT2-203ENST00000449049 TNFRSF18Q9Y5U5 241 aa9.8□□□□□ -0.84
SHMT2-203ENST00000449049 GAGE12JA6NER3 117 aa9.8□□□□□ -0.84
SHMT2-203ENST00000449049 SUMO2P61956 95 aaKnown RBP9.8□□□□□ -0.84
SHMT2-203ENST00000449049 GAGE4Q13068 117 aa9.8□□□□□ -0.84
SHMT2-203ENST00000449049 GAGE5Q13069 117 aa9.8□□□□□ -0.84
SHMT2-203ENST00000449049 GAGE13Q4V321 117 aa9.8□□□□□ -0.84
SHMT2-203ENST00000449049 UBE2D3P61077 147 aa9.79□□□□□ -0.84
SHMT2-203ENST00000449049 UBE2D2P62837 147 aa9.79□□□□□ -0.84
SHMT2-203ENST00000449049 RPL32P62910 135 aaKnown RBP9.79□□□□□ -0.84
SHMT2-203ENST00000449049 SDHAF1A6NFY7 115 aa9.79□□□□□ -0.84
SHMT2-203ENST00000449049 PMCHP20382 165 aa9.79□□□□□ -0.84
SHMT2-203ENST00000449049 POLR2KP53803 58 aaKnown RBP9.79□□□□□ -0.84
SHMT2-203ENST00000449049 PMCHL1Q16048 86 aa9.79□□□□□ -0.84
SHMT2-203ENST00000449049 TMEM70Q9BUB7 260 aa9.79□□□□□ -0.84
SHMT2-203ENST00000449049 MAP1LC3AQ9H492 121 aa9.79□□□□□ -0.84
SHMT2-203ENST00000449049 CST9LQ9H4G1 147 aa9.79□□□□□ -0.84
SHMT2-203ENST00000449049 ICOSQ9Y6W8 199 aa9.79□□□□□ -0.84
SHMT2-203ENST00000449049 CEMP1Q6PRD7 247 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-203ENST00000449049 C18orf32Q8TCD1 76 aa9.78□□□□□ -0.84
SHMT2-203ENST00000449049 WWC2-AS2Q96NR7 200 aa9.78□□□□□ -0.84
SHMT2-203ENST00000449049 A0A096LPF7 62 aa9.77□□□□□ -0.84
SHMT2-203ENST00000449049 NUPR2A6NF83 97 aa9.77□□□□□ -0.84
SHMT2-203ENST00000449049 MRPL23Q16540 153 aaKnown RBP9.77□□□□□ -0.84
SHMT2-203ENST00000449049 SMIM2Q9BVW6 85 aa9.77□□□□□ -0.84
SHMT2-203ENST00000449049 TRBV27A0A0K0K1C4 114 aa9.77□□□□□ -0.85
SHMT2-203ENST00000449049 HINT1P49773 126 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-203ENST00000449049 IGLV2-18A0A075B6J9 118 aa9.76□□□□□ -0.85
SHMT2-203ENST00000449049 K7ERU9 68 aa9.76□□□□□ -0.85
SHMT2-203ENST00000449049 DAZ4Q86SG3 579 aaKnown RBP9.76□□□□□ -0.85
SHMT2-203ENST00000449049 C15orf53Q8NAA6 179 aa9.76□□□□□ -0.85
SHMT2-203ENST00000449049 DAZ3Q9NR90 486 aaKnown RBP9.76□□□□□ -0.85
SHMT2-203ENST00000449049 LOC389332A0A1B0GUA5 103 aa9.76□□□□□ -0.85
SHMT2-203ENST00000449049 IGLL5B9A064 214 aa9.76□□□□□ -0.85
SHMT2-203ENST00000449049 VCYO14598 125 aa9.76□□□□□ -0.85
SHMT2-203ENST00000449049 SH2D6Q7Z4S9 175 aa9.76□□□□□ -0.85
SHMT2-203ENST00000449049 FAM19A2Q8N3H0 131 aa9.76□□□□□ -0.85
SHMT2-203ENST00000449049 TRAV9-2A0A087WT02 112 aa9.75□□□□□ -0.85
SHMT2-203ENST00000449049 I3L3M4 83 aa9.75□□□□□ -0.85
SHMT2-203ENST00000449049 ATP6V0E2Q8NHE4 81 aa9.75□□□□□ -0.85
SHMT2-203ENST00000449049 IGHV3-38A0A0C4DH36 116 aa9.74□□□□□ -0.85
SHMT2-203ENST00000449049 NUDT3O95989 172 aa9.74□□□□□ -0.85
SHMT2-203ENST00000449049 IFI27P40305 119 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-203ENST00000449049 Q6ZVH6 145 aa9.74□□□□□ -0.85
SHMT2-203ENST00000449049 NEGR1Q7Z3B1 354 aa9.74□□□□□ -0.85
SHMT2-203ENST00000449049 Q8N8P6 123 aa9.74□□□□□ -0.85
SHMT2-203ENST00000449049 MUC7Q8TAX7 377 aa9.74□□□□□ -0.85
SHMT2-203ENST00000449049 NXT2Q9NPJ8 142 aaKnown RBP9.74□□□□□ -0.85
SHMT2-203ENST00000449049 KLK5Q9Y337 293 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-203ENST00000449049 STAB2Q8WWQ8 2551 aa9.74□□□□□ -0.85
SHMT2-203ENST00000449049 ATOH7Q8N100 152 aa9.73□□□□□ -0.85
SHMT2-203ENST00000449049 PRSS3P2Q8NHM4 247 aa9.73□□□□□ -0.85
SHMT2-203ENST00000449049 LINC01546A6NGU7 62 aa9.73□□□□□ -0.85
SHMT2-203ENST00000449049 TSHBP01222 138 aa9.73□□□□□ -0.85
SHMT2-203ENST00000449049 URB1-AS1Q96HZ7 61 aa9.73□□□□□ -0.85
SHMT2-203ENST00000449049 KIR2DL4Q99706 377 aa9.73□□□□□ -0.85
SHMT2-203ENST00000449049 GTSF1LQ9H1H1 148 aa9.72□□□□□ -0.85
SHMT2-203ENST00000449049 K7EMI3 77 aa9.71□□□□□ -0.85
SHMT2-203ENST00000449049 APLNQ9ULZ1 77 aa9.71□□□□□ -0.85
SHMT2-203ENST00000449049 TCTAP57738 103 aa9.71□□□□□ -0.86
SHMT2-203ENST00000449049 TIRAPP58753 221 aa9.71□□□□□ -0.86
SHMT2-203ENST00000449049 TMEM97Q5BJF2 176 aa9.71□□□□□ -0.86
SHMT2-203ENST00000449049 ZFAND6Q6FIF0 208 aa9.71□□□□□ -0.86
SHMT2-203ENST00000449049 NTM-AS1Q6ZSK4 140 aa9.71□□□□□ -0.86
SHMT2-203ENST00000449049 HSBP1O75506 76 aa9.7□□□□□ -0.86
SHMT2-203ENST00000449049 LYPD5Q6UWN5 251 aa9.7□□□□□ -0.86
SHMT2-203ENST00000449049 FA2HQ7L5A8 372 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms